RNA–Protein interactions for RNA: ENST00000334859.8

LRCH3-201, Transcript of leucine rich repeats and calponin homology domain containing 3, humanhuman

TSL 1 (best) BASIC

Gene LRCH3, Length 2,258 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRCH3-201ENST00000334859 CCL20P78556 96 aa14.97□□□□□ -0.01
LRCH3-201ENST00000334859 AKR1C8PQ5T2L2 129 aa14.97□□□□□ -0.01
LRCH3-201ENST00000334859 CXorf67Q86X51 503 aaPredicted RBP14.97□□□□□ -0.01
LRCH3-201ENST00000334859 C15orf54Q8N8G6 183 aa14.97□□□□□ -0.01
LRCH3-201ENST00000334859 LIN7CQ9NUP9 197 aaKnown RBP14.97□□□□□ -0.01
LRCH3-201ENST00000334859 TINAGQ9UJW2 476 aa14.97□□□□□ -0.01
LRCH3-201ENST00000334859 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP14.97□□□□□ -0.01
LRCH3-201ENST00000334859 IGKV1-39P01597 117 aa14.97□□□□□ -0.01
LRCH3-201ENST00000334859 IGKV1D-39P04432 117 aa14.97□□□□□ -0.01
LRCH3-201ENST00000334859 DAOP14920 347 aa14.97□□□□□ -0.01
LRCH3-201ENST00000334859 MPV17P39210 176 aa14.97□□□□□ -0.01
LRCH3-201ENST00000334859 ZNF146Q15072 292 aa14.97□□□□□ -0.01
LRCH3-201ENST00000334859 GABRA6Q16445 453 aa14.97□□□□□ -0.01
LRCH3-201ENST00000334859 Q6ZRM9 215 aa14.97□□□□□ -0.01
LRCH3-201ENST00000334859 Q6ZT83 130 aa14.97□□□□□ -0.01
LRCH3-201ENST00000334859 ESRP2Q9H6T0 727 aaKnown RBP14.97□□□□□ -0.01
LRCH3-201ENST00000334859 IQCF6A8MYZ5 107 aa14.96□□□□□ -0.01
LRCH3-201ENST00000334859 HAND1O96004 215 aa14.96□□□□□ -0.01
LRCH3-201ENST00000334859 SLC25A6P12236 298 aa14.96□□□□□ -0.01
LRCH3-201ENST00000334859 CEACAM6P40199 344 aa14.96□□□□□ -0.01
LRCH3-201ENST00000334859 FIP1L1Q6UN15 594 aaKnown RBP14.96□□□□□ -0.01
LRCH3-201ENST00000334859 FDCSPQ8NFU4 85 aa14.96□□□□□ -0.01
LRCH3-201ENST00000334859 ISOC2Q96AB3 205 aa14.96□□□□□ -0.01
LRCH3-201ENST00000334859 RAB40CQ96S21 281 aa14.96□□□□□ -0.01
LRCH3-201ENST00000334859 BIN3Q9NQY0 253 aa14.96□□□□□ -0.01
LRCH3-201ENST00000334859 CFAP47Q6ZTR5 3102 aa14.96□□□□□ -0.01
LRCH3-201ENST00000334859 AGFG2O95081 481 aa14.96□□□□□ -0.01
LRCH3-201ENST00000334859 IAPPP10997 89 aa14.96□□□□□ -0.01
LRCH3-201ENST00000334859 SULT1A1P50225 295 aa14.96□□□□□ -0.01
LRCH3-201ENST00000334859 SHEQ5VZ18 495 aa14.96□□□□□ -0.01
LRCH3-201ENST00000334859 INO80CQ6PI98 192 aaPredicted RBP14.96□□□□□ -0.01
LRCH3-201ENST00000334859 LINC00518Q8N0U6 118 aa14.96□□□□□ -0.01
LRCH3-201ENST00000334859 ZNF295-AS1Q8N0V1 137 aa14.96□□□□□ -0.01
LRCH3-201ENST00000334859 KLF14Q8TD94 323 aaPredicted RBP14.96□□□□□ -0.01
LRCH3-201ENST00000334859 EP300Q09472 2414 aaPredicted RBP14.95□□□□□ -0.02
LRCH3-201ENST00000334859 GTF3C1Q12789 2109 aa14.95□□□□□ -0.02
LRCH3-201ENST00000334859 RBFOX3A6NFN3 312 aa14.95□□□□□ -0.02
LRCH3-201ENST00000334859 TXNL1O43396 289 aa14.95□□□□□ -0.02
LRCH3-201ENST00000334859 DFFBO76075 338 aa14.95□□□□□ -0.02
LRCH3-201ENST00000334859 WISP2O76076 250 aa14.95□□□□□ -0.02
LRCH3-201ENST00000334859 IGKV1-5P01602 117 aa14.95□□□□□ -0.02
LRCH3-201ENST00000334859 PAX6P26367 422 aa14.95□□□□□ -0.02
LRCH3-201ENST00000334859 CEBPGP53567 150 aa14.95□□□□□ -0.02
LRCH3-201ENST00000334859 SOHLH1Q5JUK2 328 aa14.95□□□□□ -0.02
LRCH3-201ENST00000334859 SPSB3Q6PJ21 355 aa14.95□□□□□ -0.02
LRCH3-201ENST00000334859 SNIP1Q8TAD8 396 aaKnown RBP14.95□□□□□ -0.02
LRCH3-201ENST00000334859 HIST1H2BAQ96A08 127 aa14.95□□□□□ -0.02
LRCH3-201ENST00000334859 A0A1B0GW64 132 aa14.95□□□□□ -0.02
LRCH3-201ENST00000334859 IFNA5P01569 189 aa14.95□□□□□ -0.02
LRCH3-201ENST00000334859 HAGHQ16775 308 aa14.95□□□□□ -0.02
LRCH3-201ENST00000334859 DRAM1Q8N682 238 aa14.95□□□□□ -0.02
LRCH3-201ENST00000334859 OR8G5Q8NG78 346 aa14.95□□□□□ -0.02
LRCH3-201ENST00000334859 SFT2D1Q8WV19 159 aa14.95□□□□□ -0.02
LRCH3-201ENST00000334859 LSM10Q969L4 123 aaKnown RBP14.95□□□□□ -0.02
LRCH3-201ENST00000334859 MBNL3Q9NUK0 354 aaKnown RBP14.95□□□□□ -0.02
LRCH3-201ENST00000334859 KLF2Q9Y5W3 355 aaPredicted RBP14.95□□□□□ -0.02
LRCH3-201ENST00000334859 PUS1Q9Y606 427 aaKnown RBP eCLIP14.95□□□□□ -0.02
LRCH3-201ENST00000334859 A0A1W2PPH5 198 aa14.94□□□□□ -0.02
LRCH3-201ENST00000334859 BTBD17A6NE02 478 aa14.94□□□□□ -0.02
LRCH3-201ENST00000334859 A6NLC8 198 aa14.94□□□□□ -0.02
LRCH3-201ENST00000334859 TMEM210A6NLX4 147 aa14.94□□□□□ -0.02
LRCH3-201ENST00000334859 KIAA1324LA8MWY0 1029 aaPredicted RBP14.94□□□□□ -0.02
LRCH3-201ENST00000334859 WNT9BO14905 357 aa14.94□□□□□ -0.02
LRCH3-201ENST00000334859 SYNGR2O43760 224 aa14.94□□□□□ -0.02
LRCH3-201ENST00000334859 IGHG3P01860 377 aa14.94□□□□□ -0.02
LRCH3-201ENST00000334859 RAB5BP61020 215 aa14.94□□□□□ -0.02
LRCH3-201ENST00000334859 HOXA4Q00056 320 aaPredicted RBP14.94□□□□□ -0.02
LRCH3-201ENST00000334859 KRBOX4Q5JUW0 171 aa14.94□□□□□ -0.02
LRCH3-201ENST00000334859 ZNF826PQ6ZT77 177 aa14.94□□□□□ -0.02
LRCH3-201ENST00000334859 THNSL2Q86YJ6 484 aa14.94□□□□□ -0.02
LRCH3-201ENST00000334859 KCNIP1Q9NZI2 227 aa14.94□□□□□ -0.02
LRCH3-201ENST00000334859 WSB1Q9Y6I7 421 aa14.94□□□□□ -0.02
LRCH3-201ENST00000334859 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP14.94□□□□□ -0.02
LRCH3-201ENST00000334859 PSPNO60542 156 aa14.94□□□□□ -0.02
LRCH3-201ENST00000334859 WNT2P09544 360 aa14.94□□□□□ -0.02
LRCH3-201ENST00000334859 TAS2R30P59541 319 aa14.94□□□□□ -0.02
LRCH3-201ENST00000334859 RHEBQ15382 184 aa14.94□□□□□ -0.02
LRCH3-201ENST00000334859 VWA1Q6PCB0 445 aa14.94□□□□□ -0.02
LRCH3-201ENST00000334859 KDF1Q8NAX2 398 aaPredicted RBP14.94□□□□□ -0.02
LRCH3-201ENST00000334859 KIAA1456Q9P272 454 aa14.94□□□□□ -0.02
LRCH3-201ENST00000334859 WIPI2Q9Y4P8 454 aa14.94□□□□□ -0.02
LRCH3-201ENST00000334859 TMEM30CPA0ZSE6 113 aa14.93□□□□□ -0.02
LRCH3-201ENST00000334859 MLNRO43193 412 aa14.93□□□□□ -0.02
LRCH3-201ENST00000334859 METTL15P1P0C7V9 234 aa14.93□□□□□ -0.02
LRCH3-201ENST00000334859 CD82P27701 267 aa14.93□□□□□ -0.02
LRCH3-201ENST00000334859 TLE4Q04727 773 aa14.93□□□□□ -0.02
LRCH3-201ENST00000334859 ZNF585BQ52M93 769 aa14.93□□□□□ -0.02
LRCH3-201ENST00000334859 DEFB124Q8NES8 71 aa14.93□□□□□ -0.02
LRCH3-201ENST00000334859 FZR1Q9UM11 496 aa14.93□□□□□ -0.02
LRCH3-201ENST00000334859 PRR14LQ5THK1 2151 aa14.93□□□□□ -0.02
LRCH3-201ENST00000334859 CEACAM1P13688 526 aa14.92□□□□□ -0.02
LRCH3-201ENST00000334859 PTAFRP25105 342 aa14.92□□□□□ -0.02
LRCH3-201ENST00000334859 OR1L1Q8NH94 360 aa14.92□□□□□ -0.02
LRCH3-201ENST00000334859 SMDT1Q9H4I9 107 aa14.92□□□□□ -0.02
LRCH3-201ENST00000334859 PSENENQ9NZ42 101 aa14.92□□□□□ -0.02
LRCH3-201ENST00000334859 SPENQ96T58 3664 aaKnown RBP14.92□□□□□ -0.02
LRCH3-201ENST00000334859 SPAARA0A1B0GVQ0 90 aa14.92□□□□□ -0.02
LRCH3-201ENST00000334859 PCP4L1A6NKN8 68 aa14.92□□□□□ -0.02
LRCH3-201ENST00000334859 C1orf196B1AJZ1 125 aa14.92□□□□□ -0.02
LRCH3-201ENST00000334859 TIMM8AO60220 97 aaPredicted RBP14.92□□□□□ -0.02
Retrieved 100 of 20,778 RNA–protein pairs in 33.4 ms