RNA–Protein interactions for RNA: ENST00000331920.10

PTCH1-201, Transcript of patched 1, humanhuman

APPRIS P1 TSL 5 BASIC

Gene PTCH1, Length 8,057 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCH1-201ENST00000331920 YLPM1P49750 1951 aaKnown RBP14.41□□□□□ -0.1
PTCH1-201ENST00000331920 C1QTNF9BB2RNN3 333 aa14.41□□□□□ -0.1
PTCH1-201ENST00000331920 LINC01387J3KSC0 135 aa14.41□□□□□ -0.1
PTCH1-201ENST00000331920 GPX1P07203 203 aa14.41□□□□□ -0.1
PTCH1-201ENST00000331920 CLEC2AQ6UVW9 174 aa14.41□□□□□ -0.1
PTCH1-201ENST00000331920 FGF20Q9NP95 211 aaPredicted RBP14.41□□□□□ -0.1
PTCH1-201ENST00000331920 SPOCK3Q9BQ16 436 aa14.4□□□□□ -0.1
PTCH1-201ENST00000331920 OPN4Q9UHM6 478 aa14.4□□□□□ -0.1
PTCH1-201ENST00000331920 MALP21145 153 aa14.4□□□□□ -0.1
PTCH1-201ENST00000331920 TRAF4Q9BUZ4 470 aaPredicted RBP14.4□□□□□ -0.1
PTCH1-201ENST00000331920 C9JCJ5 164 aa14.4□□□□□ -0.1
PTCH1-201ENST00000331920 TYMSP04818 313 aa14.4□□□□□ -0.1
PTCH1-201ENST00000331920 PRELID3AQ96N28 172 aa14.4□□□□□ -0.1
PTCH1-201ENST00000331920 F12P00748 615 aaPredicted RBP14.4□□□□□ -0.1
PTCH1-201ENST00000331920 IBA57Q5T440 356 aaKnown RBP14.4□□□□□ -0.1
PTCH1-201ENST00000331920 C12orf54Q6X4T0 127 aa14.4□□□□□ -0.1
PTCH1-201ENST00000331920 ASB5Q8WWX0 329 aa14.4□□□□□ -0.1
PTCH1-201ENST00000331920 TINAGQ9UJW2 476 aa14.4□□□□□ -0.1
PTCH1-201ENST00000331920 RGPD5Q99666 1765 aa14.4□□□□□ -0.1
PTCH1-201ENST00000331920 SRFP11831 508 aa14.4□□□□□ -0.1
PTCH1-201ENST00000331920 CCL28Q9NRJ3 127 aa14.4□□□□□ -0.1
PTCH1-201ENST00000331920 COL1A1P02452 1464 aaPredicted RBP14.4□□□□□ -0.1
PTCH1-201ENST00000331920 SYNGR1O43759 233 aa14.4□□□□□ -0.1
PTCH1-201ENST00000331920 CDK2AP2O75956 126 aa14.4□□□□□ -0.1
PTCH1-201ENST00000331920 PAQR9Q6ZVX9 377 aa14.4□□□□□ -0.1
PTCH1-201ENST00000331920 C2orf88Q9BSF0 95 aa14.4□□□□□ -0.1
PTCH1-201ENST00000331920 RCC2Q9P258 522 aaKnown RBP14.4□□□□□ -0.1
PTCH1-201ENST00000331920 CCL21O00585 134 aa14.39□□□□□ -0.11
PTCH1-201ENST00000331920 ACER2Q5QJU3 275 aa14.39□□□□□ -0.11
PTCH1-201ENST00000331920 FIZ1Q96SL8 496 aa14.39□□□□□ -0.11
PTCH1-201ENST00000331920 PSMG3Q9BT73 122 aaPredicted RBP14.39□□□□□ -0.11
PTCH1-201ENST00000331920 LEPROTL1O95214 131 aa14.39□□□□□ -0.11
PTCH1-201ENST00000331920 SMIM13P0DJ93 91 aa14.39□□□□□ -0.11
PTCH1-201ENST00000331920 SUMO3P55854 103 aaPredicted RBP14.39□□□□□ -0.11
PTCH1-201ENST00000331920 SSPNQ14714 243 aa14.39□□□□□ -0.11
PTCH1-201ENST00000331920 UBE2V2Q15819 145 aa14.39□□□□□ -0.11
PTCH1-201ENST00000331920 ALKBH7Q9BT30 221 aaPredicted RBP14.39□□□□□ -0.11
PTCH1-201ENST00000331920 C2CD4DB7Z1M9 353 aa14.39□□□□□ -0.11
PTCH1-201ENST00000331920 HYPMO75409 117 aa14.39□□□□□ -0.11
PTCH1-201ENST00000331920 FXYD3Q14802 87 aa14.39□□□□□ -0.11
PTCH1-201ENST00000331920 SLC25A42Q86VD7 318 aa14.39□□□□□ -0.11
PTCH1-201ENST00000331920 OR52M1Q8NGK5 317 aa14.39□□□□□ -0.11
PTCH1-201ENST00000331920 TMEM171Q8WVE6 324 aa14.39□□□□□ -0.11
PTCH1-201ENST00000331920 IGHV4-39P01824 125 aa14.39□□□□□ -0.11
PTCH1-201ENST00000331920 SMAD4Q13485 552 aaKnown RBP14.39□□□□□ -0.11
PTCH1-201ENST00000331920 HIKESHIQ53FT3 197 aa14.39□□□□□ -0.11
PTCH1-201ENST00000331920 LAMTOR1Q6IAA8 161 aa14.39□□□□□ -0.11
PTCH1-201ENST00000331920 NUDT16L1Q9BRJ7 211 aaKnown RBP14.39□□□□□ -0.11
PTCH1-201ENST00000331920 NTMQ9P121 344 aa14.39□□□□□ -0.11
PTCH1-201ENST00000331920 SMAD7O15105 426 aaKnown RBP14.39□□□□□ -0.11
PTCH1-201ENST00000331920 LINC01565O15544 149 aa14.39□□□□□ -0.11
PTCH1-201ENST00000331920 ZFPL1O95159 310 aa14.39□□□□□ -0.11
PTCH1-201ENST00000331920 CADM4Q8NFZ8 388 aa14.39□□□□□ -0.11
PTCH1-201ENST00000331920 ASB1Q9Y576 335 aa14.39□□□□□ -0.11
PTCH1-201ENST00000331920 TDGF1P13385 188 aa14.39□□□□□ -0.11
PTCH1-201ENST00000331920 COL10A1Q03692 680 aa14.39□□□□□ -0.11
PTCH1-201ENST00000331920 ZNF385CQ66K41 422 aaPredicted RBP14.39□□□□□ -0.11
PTCH1-201ENST00000331920 NKX2-6A6NCS4 301 aa14.38□□□□□ -0.11
PTCH1-201ENST00000331920 SOCS1O15524 211 aa14.38□□□□□ -0.11
PTCH1-201ENST00000331920 IL19Q9UHD0 177 aa14.38□□□□□ -0.11
PTCH1-201ENST00000331920 REG1AP05451 166 aa14.38□□□□□ -0.11
PTCH1-201ENST00000331920 DIRC2Q96SL1 478 aa14.38□□□□□ -0.11
PTCH1-201ENST00000331920 PARLQ9H300 379 aa14.38□□□□□ -0.11
PTCH1-201ENST00000331920 ANKRD37Q7Z713 158 aa14.38□□□□□ -0.11
PTCH1-201ENST00000331920 SHISA4Q96DD7 197 aa14.38□□□□□ -0.11
PTCH1-201ENST00000331920 A0A1W2PS18 150 aa14.38□□□□□ -0.11
PTCH1-201ENST00000331920 KLF9Q13886 244 aaPredicted RBP14.38□□□□□ -0.11
PTCH1-201ENST00000331920 ZNF770Q6IQ21 691 aaPredicted RBP14.38□□□□□ -0.11
PTCH1-201ENST00000331920 ZNF275Q9NSD4 429 aaPredicted RBP14.38□□□□□ -0.11
PTCH1-201ENST00000331920 COX19Q49B96 90 aa14.38□□□□□ -0.11
PTCH1-201ENST00000331920 TRAV8-6A0A0B4J262 113 aa14.38□□□□□ -0.11
PTCH1-201ENST00000331920 GDF9O60383 454 aa14.38□□□□□ -0.11
PTCH1-201ENST00000331920 HBZP02008 142 aa14.38□□□□□ -0.11
PTCH1-201ENST00000331920 MAGEA5P43359 124 aa14.38□□□□□ -0.11
PTCH1-201ENST00000331920 ZNF784Q8NCA9 323 aaPredicted RBP14.38□□□□□ -0.11
PTCH1-201ENST00000331920 RNASEH2CQ8TDP1 164 aaKnown RBP14.38□□□□□ -0.11
PTCH1-201ENST00000331920 VSTM2LQ96N03 204 aa14.38□□□□□ -0.11
PTCH1-201ENST00000331920 TMEM70Q9BUB7 260 aa14.38□□□□□ -0.11
PTCH1-201ENST00000331920 MTFP1Q9UDX5 166 aa14.38□□□□□ -0.11
PTCH1-201ENST00000331920 NALCNQ8IZF0 1738 aa14.38□□□□□ -0.11
PTCH1-201ENST00000331920 C7orf77A4D0Y5 90 aa14.37□□□□□ -0.11
PTCH1-201ENST00000331920 THY1P04216 161 aa14.37□□□□□ -0.11
PTCH1-201ENST00000331920 FCARP24071 287 aa14.37□□□□□ -0.11
PTCH1-201ENST00000331920 MTURNQ8N3F0 131 aa14.37□□□□□ -0.11
PTCH1-201ENST00000331920 RNF7Q9UBF6 113 aa14.37□□□□□ -0.11
PTCH1-201ENST00000331920 SHPRHQ149N8 1683 aa14.37□□□□□ -0.11
PTCH1-201ENST00000331920 FAM74A7A6NL05 159 aa14.37□□□□□ -0.11
PTCH1-201ENST00000331920 A8MWL6 223 aa14.37□□□□□ -0.11
PTCH1-201ENST00000331920 SLC25A20O43772 301 aa14.37□□□□□ -0.11
PTCH1-201ENST00000331920 TMEM50BP56557 158 aa14.37□□□□□ -0.11
PTCH1-201ENST00000331920 ANKRD33Q7Z3H0 272 aa14.37□□□□□ -0.11
PTCH1-201ENST00000331920 ZNF707Q96C28 371 aaPredicted RBP14.37□□□□□ -0.11
PTCH1-201ENST00000331920 C18orf15Q96N68 181 aa14.37□□□□□ -0.11
PTCH1-201ENST00000331920 FAM106CPP0CH98 169 aa14.37□□□□□ -0.11
PTCH1-201ENST00000331920 CCR5P51681 352 aa14.37□□□□□ -0.11
PTCH1-201ENST00000331920 PTOV1Q86YD1 416 aa14.37□□□□□ -0.11
PTCH1-201ENST00000331920 UBALD2Q8IYN6 164 aa14.37□□□□□ -0.11
PTCH1-201ENST00000331920 LHFPL5Q8TAF8 219 aa14.37□□□□□ -0.11
PTCH1-201ENST00000331920 CA10Q9NS85 328 aa14.37□□□□□ -0.11
PTCH1-201ENST00000331920 ADRA2AP08913 450 aa14.37□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 101.5 ms