RNA–Protein interactions for RNA: ENST00000330295.9

CTHRC1-201, Transcript of collagen triple helix repeat containing 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CTHRC1, Length 1,271 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTHRC1-201ENST00000330295 OR51T1Q8NGJ9 327 aa11.4□□□□□ -0.58
CTHRC1-201ENST00000330295 OR1N2Q8NGR9 330 aa11.4□□□□□ -0.58
CTHRC1-201ENST00000330295 TMED9Q9BVK6 235 aa11.4□□□□□ -0.58
CTHRC1-201ENST00000330295 GON7Q9BXV9 100 aa11.4□□□□□ -0.58
CTHRC1-201ENST00000330295 SLC33A1O00400 549 aaPredicted RBP11.39□□□□□ -0.59
CTHRC1-201ENST00000330295 ST8SIA5O15466 376 aa11.39□□□□□ -0.59
CTHRC1-201ENST00000330295 FGF16O43320 207 aa11.39□□□□□ -0.59
CTHRC1-201ENST00000330295 OR7C1O76099 320 aaPredicted RBP11.39□□□□□ -0.59
CTHRC1-201ENST00000330295 CDRT1O95170 752 aa11.39□□□□□ -0.59
CTHRC1-201ENST00000330295 ARSBP15848 533 aa11.39□□□□□ -0.59
CTHRC1-201ENST00000330295 IRF3Q14653 427 aa11.39□□□□□ -0.59
CTHRC1-201ENST00000330295 SLC22A6Q4U2R8 563 aa11.39□□□□□ -0.59
CTHRC1-201ENST00000330295 GLT8D1Q68CQ7 371 aa11.39□□□□□ -0.59
CTHRC1-201ENST00000330295 Q6P435 159 aa11.39□□□□□ -0.59
CTHRC1-201ENST00000330295 ACSM6Q6P461 480 aa11.39□□□□□ -0.59
CTHRC1-201ENST00000330295 CEACAM19Q7Z692 300 aa11.39□□□□□ -0.59
CTHRC1-201ENST00000330295 OR10K1Q8NGX5 313 aa11.39□□□□□ -0.59
CTHRC1-201ENST00000330295 PHYHIPQ92561 330 aa11.39□□□□□ -0.59
CTHRC1-201ENST00000330295 MRPS24Q96EL2 167 aaKnown RBP11.39□□□□□ -0.59
CTHRC1-201ENST00000330295 UQCC2Q9BRT2 126 aa11.39□□□□□ -0.59
CTHRC1-201ENST00000330295 GHITMQ9H3K2 345 aa11.39□□□□□ -0.59
CTHRC1-201ENST00000330295 SPACA1Q9HBV2 294 aa11.39□□□□□ -0.59
CTHRC1-201ENST00000330295 TAS2R3Q9NYW6 316 aa11.39□□□□□ -0.59
CTHRC1-201ENST00000330295 GHRLQ9UBU3 117 aa11.39□□□□□ -0.59
CTHRC1-201ENST00000330295 ST3GAL6Q9Y274 331 aa11.39□□□□□ -0.59
CTHRC1-201ENST00000330295 MRPS28Q9Y2Q9 187 aaKnown RBP11.39□□□□□ -0.59
CTHRC1-201ENST00000330295 TRAV8-7A0A075B6U6 113 aa11.38□□□□□ -0.59
CTHRC1-201ENST00000330295 ODAMA1E959 279 aa11.38□□□□□ -0.59
CTHRC1-201ENST00000330295 MAGEA13PA6NCF6 341 aa11.38□□□□□ -0.59
CTHRC1-201ENST00000330295 CXorf65A6NEN9 183 aa11.38□□□□□ -0.59
CTHRC1-201ENST00000330295 NUPR2A6NF83 97 aa11.38□□□□□ -0.59
CTHRC1-201ENST00000330295 C12orf77C9JDV5 145 aa11.38□□□□□ -0.59
CTHRC1-201ENST00000330295 MRPS14O60783 128 aaKnown RBP11.38□□□□□ -0.59
CTHRC1-201ENST00000330295 SERPINA2P20848 420 aa11.38□□□□□ -0.59
CTHRC1-201ENST00000330295 MNDAP41218 407 aa11.38□□□□□ -0.59
CTHRC1-201ENST00000330295 RBM11P57052 281 aaKnown RBP11.38□□□□□ -0.59
CTHRC1-201ENST00000330295 AESQ08117 197 aa11.38□□□□□ -0.59
CTHRC1-201ENST00000330295 MLLT11Q13015 90 aaPredicted RBP11.38□□□□□ -0.59
CTHRC1-201ENST00000330295 MPV17LQ2QL34 196 aa11.38□□□□□ -0.59
CTHRC1-201ENST00000330295 NHLRC3Q5JS37 347 aa11.38□□□□□ -0.59
CTHRC1-201ENST00000330295 AWAT2Q6E213 333 aa11.38□□□□□ -0.59
CTHRC1-201ENST00000330295 SVOPQ8N4V2 548 aa11.38□□□□□ -0.59
CTHRC1-201ENST00000330295 TPRX1Q8N7U7 411 aa11.38□□□□□ -0.59
CTHRC1-201ENST00000330295 OR4D6Q8NGJ1 314 aa11.38□□□□□ -0.59
CTHRC1-201ENST00000330295 NEK7Q8TDX7 302 aa11.38□□□□□ -0.59
CTHRC1-201ENST00000330295 CORO2AQ92828 525 aa11.38□□□□□ -0.59
CTHRC1-201ENST00000330295 MUL1Q969V5 352 aa11.38□□□□□ -0.59
CTHRC1-201ENST00000330295 ORAI1Q96D31 301 aa11.38□□□□□ -0.59
CTHRC1-201ENST00000330295 YTHDF1Q9BYJ9 559 aaKnown RBP11.38□□□□□ -0.59
CTHRC1-201ENST00000330295 ING3Q9NXR8 418 aa11.38□□□□□ -0.59
CTHRC1-201ENST00000330295 LSM2Q9Y333 95 aaKnown RBP11.38□□□□□ -0.59
CTHRC1-201ENST00000330295 MEIKINA0A087WXM9 373 aa11.37□□□□□ -0.59
CTHRC1-201ENST00000330295 HSPB6O14558 160 aa11.37□□□□□ -0.59
CTHRC1-201ENST00000330295 HSPA12AO43301 675 aa11.37□□□□□ -0.59
CTHRC1-201ENST00000330295 ARL6IP5O75915 188 aa11.37□□□□□ -0.59
CTHRC1-201ENST00000330295 BRI3O95415 125 aa11.37□□□□□ -0.59
CTHRC1-201ENST00000330295 UBBP0CG47 229 aa11.37□□□□□ -0.59
CTHRC1-201ENST00000330295 CEACAM3P40198 252 aa11.37□□□□□ -0.59
CTHRC1-201ENST00000330295 GLIPR1P48060 266 aa11.37□□□□□ -0.59
CTHRC1-201ENST00000330295 TPBGQ13641 420 aa11.37□□□□□ -0.59
CTHRC1-201ENST00000330295 PMS2P11Q13670 270 aa11.37□□□□□ -0.59
CTHRC1-201ENST00000330295 PIGYQ3MUY2 71 aa11.37□□□□□ -0.59
CTHRC1-201ENST00000330295 HSD17B12Q53GQ0 312 aa11.37□□□□□ -0.59
CTHRC1-201ENST00000330295 ATAD3CQ5T2N8 411 aa11.37□□□□□ -0.59
CTHRC1-201ENST00000330295 TPTE2P1Q5T6R2 138 aa11.37□□□□□ -0.59
CTHRC1-201ENST00000330295 LIPKQ5VXJ0 399 aa11.37□□□□□ -0.59
CTHRC1-201ENST00000330295 GLIPR1L1Q6UWM5 242 aa11.37□□□□□ -0.59
CTHRC1-201ENST00000330295 ZNF367Q7RTV3 350 aa11.37□□□□□ -0.59
CTHRC1-201ENST00000330295 THNSL2Q86YJ6 484 aa11.37□□□□□ -0.59
CTHRC1-201ENST00000330295 ABHD12Q8N2K0 398 aa11.37□□□□□ -0.59
CTHRC1-201ENST00000330295 ZNF596Q8TC21 504 aa11.37□□□□□ -0.59
CTHRC1-201ENST00000330295 MGLLQ99685 303 aa11.37□□□□□ -0.59
CTHRC1-201ENST00000330295 CST11Q9H112 138 aa11.37□□□□□ -0.59
CTHRC1-201ENST00000330295 NCOR1P1Q9H4R4 102 aa11.37□□□□□ -0.59
CTHRC1-201ENST00000330295 IFT22Q9H7X7 185 aa11.37□□□□□ -0.59
CTHRC1-201ENST00000330295 TUBA4BQ9H853 241 aa11.37□□□□□ -0.59
CTHRC1-201ENST00000330295 RRP15Q9Y3B9 282 aaKnown RBP11.37□□□□□ -0.59
CTHRC1-201ENST00000330295 DYNC1H1Q14204 4646 aaKnown RBP11.36□□□□□ -0.59
CTHRC1-201ENST00000330295 FAM90A18PA6NE21 464 aa11.36□□□□□ -0.59
CTHRC1-201ENST00000330295 FAM90A16PA6NEW6 464 aa11.36□□□□□ -0.59
CTHRC1-201ENST00000330295 FAM90A20PA6NIJ5 464 aa11.36□□□□□ -0.59
CTHRC1-201ENST00000330295 ZNF729A6NN14 1252 aaPredicted RBP11.36□□□□□ -0.59
CTHRC1-201ENST00000330295 FAM90A9PA6NNJ1 464 aa11.36□□□□□ -0.59
CTHRC1-201ENST00000330295 FAM90A12PA8MX19 464 aa11.36□□□□□ -0.59
CTHRC1-201ENST00000330295 FAM90A5PA8MXJ8 464 aa11.36□□□□□ -0.59
CTHRC1-201ENST00000330295 I3L521 148 aa11.36□□□□□ -0.59
CTHRC1-201ENST00000330295 TOR1AO14656 332 aa11.36□□□□□ -0.59
CTHRC1-201ENST00000330295 IGHG4P01861 327 aa11.36□□□□□ -0.59
CTHRC1-201ENST00000330295 FAM90A15PP0C7V4 464 aa11.36□□□□□ -0.59
CTHRC1-201ENST00000330295 FAM90A13PP0C7W8 464 aa11.36□□□□□ -0.59
CTHRC1-201ENST00000330295 FAM90A14PP0C7W9 464 aa11.36□□□□□ -0.59
CTHRC1-201ENST00000330295 FAM90A24PP0C7X0 464 aa11.36□□□□□ -0.59
CTHRC1-201ENST00000330295 SRMP19623 302 aa11.36□□□□□ -0.59
CTHRC1-201ENST00000330295 GABARAPL2P60520 117 aa11.36□□□□□ -0.59
CTHRC1-201ENST00000330295 RUNX1Q01196 453 aa11.36□□□□□ -0.59
CTHRC1-201ENST00000330295 RBM39Q14498 530 aaKnown RBP11.36□□□□□ -0.59
CTHRC1-201ENST00000330295 ATXN7L3Q14CW9 347 aaPredicted RBP11.36□□□□□ -0.59
CTHRC1-201ENST00000330295 TBCEQ15813 527 aaPredicted RBP11.36□□□□□ -0.59
CTHRC1-201ENST00000330295 LGALS9CQ6DKI2 356 aa11.36□□□□□ -0.59
CTHRC1-201ENST00000330295 CCDC144NLQ6NUI1 221 aa11.36□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 48 ms