RNA–Protein interactions for RNA: ENST00000325110.10

HMGCS1-201, Transcript of 3-hydroxy-3-methylglutaryl-CoA synthase 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HMGCS1, Length 3,506 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCS1-201ENST00000325110 HBG1P69891 147 aa10.99□□□□□ -0.65
HMGCS1-201ENST00000325110 HBG2P69892 147 aa10.99□□□□□ -0.65
HMGCS1-201ENST00000325110 HLA-DRB3P79483 266 aa10.99□□□□□ -0.65
HMGCS1-201ENST00000325110 IL24Q13007 206 aa10.99□□□□□ -0.65
HMGCS1-201ENST00000325110 TMEM251Q8N6I4 163 aa10.99□□□□□ -0.65
HMGCS1-201ENST00000325110 CLEC18CQ8NCF0 446 aa10.99□□□□□ -0.65
HMGCS1-201ENST00000325110 ARV1Q9H2C2 271 aa10.99□□□□□ -0.65
HMGCS1-201ENST00000325110 MED12LQ86YW9 2145 aa10.99□□□□□ -0.65
HMGCS1-201ENST00000325110 IGHV3-43A0A0B4J1X8 118 aa10.99□□□□□ -0.65
HMGCS1-201ENST00000325110 DEFB108AA8MXU0 73 aa10.99□□□□□ -0.65
HMGCS1-201ENST00000325110 LYZL6O75951 148 aa10.99□□□□□ -0.65
HMGCS1-201ENST00000325110 CXCL1P09341 107 aa10.99□□□□□ -0.65
HMGCS1-201ENST00000325110 IGHV3-43DP0DP04 118 aa10.99□□□□□ -0.65
HMGCS1-201ENST00000325110 PLA2G5P39877 138 aa10.99□□□□□ -0.65
HMGCS1-201ENST00000325110 ERVS71-1P61550 626 aa10.99□□□□□ -0.65
HMGCS1-201ENST00000325110 FOXO1Q12778 655 aa10.99□□□□□ -0.65
HMGCS1-201ENST00000325110 SPSB3Q6PJ21 355 aa10.99□□□□□ -0.65
HMGCS1-201ENST00000325110 BTNL3Q6UXE8 466 aa10.99□□□□□ -0.65
HMGCS1-201ENST00000325110 TMEM56Q96MV1 263 aa10.99□□□□□ -0.65
HMGCS1-201ENST00000325110 TTTY12Q9BZ98 90 aa10.99□□□□□ -0.65
HMGCS1-201ENST00000325110 RNF122Q9H9V4 155 aa10.99□□□□□ -0.65
HMGCS1-201ENST00000325110 GAR1Q9NY12 217 aaKnown RBP10.99□□□□□ -0.65
HMGCS1-201ENST00000325110 KCNIP1Q9NZI2 227 aa10.99□□□□□ -0.65
HMGCS1-201ENST00000325110 TMEM56-RWDD3S4R434 201 aa10.99□□□□□ -0.65
HMGCS1-201ENST00000325110 UBE2CO00762 179 aa10.98□□□□□ -0.65
HMGCS1-201ENST00000325110 MT-CO3P00414 261 aa10.98□□□□□ -0.65
HMGCS1-201ENST00000325110 FABP4P15090 132 aa10.98□□□□□ -0.65
HMGCS1-201ENST00000325110 ZFP36L1Q07352 338 aaKnown RBP10.98□□□□□ -0.65
HMGCS1-201ENST00000325110 BAXQ07812 192 aa10.98□□□□□ -0.65
HMGCS1-201ENST00000325110 ICAM4Q14773 271 aa10.98□□□□□ -0.65
HMGCS1-201ENST00000325110 ASCL4Q6XD76 172 aa10.98□□□□□ -0.65
HMGCS1-201ENST00000325110 OR5A2Q8NGI9 324 aa10.98□□□□□ -0.65
HMGCS1-201ENST00000325110 SMIM7Q9BQ49 75 aa10.98□□□□□ -0.65
HMGCS1-201ENST00000325110 CABLES2Q9BTV7 478 aa10.98□□□□□ -0.65
HMGCS1-201ENST00000325110 OR2J1Q9GZK6 312 aa10.98□□□□□ -0.65
HMGCS1-201ENST00000325110 ARRDC1-AS1Q9H2J1 176 aa10.98□□□□□ -0.65
HMGCS1-201ENST00000325110 COL5A1P20908 1838 aaPredicted RBP10.98□□□□□ -0.65
HMGCS1-201ENST00000325110 NBEAQ8NFP9 2946 aa10.98□□□□□ -0.65
HMGCS1-201ENST00000325110 DMDP11532 3685 aa10.98□□□□□ -0.65
HMGCS1-201ENST00000325110 H0Y980 276 aa10.98□□□□□ -0.65
HMGCS1-201ENST00000325110 YKT6O15498 198 aa10.98□□□□□ -0.65
HMGCS1-201ENST00000325110 SOX15O60248 233 aa10.98□□□□□ -0.65
HMGCS1-201ENST00000325110 RAC2P15153 192 aa10.98□□□□□ -0.65
HMGCS1-201ENST00000325110 ARR3P36575 388 aa10.98□□□□□ -0.65
HMGCS1-201ENST00000325110 EDDM3AQ14507 147 aa10.98□□□□□ -0.65
HMGCS1-201ENST00000325110 ATP1A1-AS1Q5TC04 95 aa10.98□□□□□ -0.65
HMGCS1-201ENST00000325110 Q6ZRM9 215 aa10.98□□□□□ -0.65
HMGCS1-201ENST00000325110 SSX9Q7RTT3 188 aa10.98□□□□□ -0.65
HMGCS1-201ENST00000325110 MDP1Q86V88 176 aa10.98□□□□□ -0.65
HMGCS1-201ENST00000325110 MRPL30Q8TCC3 161 aaKnown RBP10.98□□□□□ -0.65
HMGCS1-201ENST00000325110 GPR61Q9BZJ8 451 aa10.98□□□□□ -0.65
HMGCS1-201ENST00000325110 METTL1Q9UBP6 276 aaKnown RBP10.98□□□□□ -0.65
HMGCS1-201ENST00000325110 MAP1LC3B2A6NCE7 125 aa10.98□□□□□ -0.65
HMGCS1-201ENST00000325110 BTBD17A6NE02 478 aa10.98□□□□□ -0.65
HMGCS1-201ENST00000325110 ERVFRD-1P60508 538 aa10.98□□□□□ -0.65
HMGCS1-201ENST00000325110 NMSQ5H8A3 153 aa10.98□□□□□ -0.65
HMGCS1-201ENST00000325110 SNX22Q96L94 193 aa10.98□□□□□ -0.65
HMGCS1-201ENST00000325110 MAP1LC3BQ9GZQ8 125 aa10.98□□□□□ -0.65
HMGCS1-201ENST00000325110 SH2D2AQ9NP31 389 aa10.98□□□□□ -0.65
HMGCS1-201ENST00000325110 TAAR3PQ9P1P4 343 aa10.98□□□□□ -0.65
HMGCS1-201ENST00000325110 POLEQ07864 2286 aa10.98□□□□□ -0.65
HMGCS1-201ENST00000325110 TRAV24A0A0B4J272 114 aa10.97□□□□□ -0.65
HMGCS1-201ENST00000325110 A0A0U1RQK1 487 aa10.97□□□□□ -0.65
HMGCS1-201ENST00000325110 NAPSAO96009 420 aa10.97□□□□□ -0.65
HMGCS1-201ENST00000325110 FOLR2P14207 255 aa10.97□□□□□ -0.65
HMGCS1-201ENST00000325110 PMELP40967 661 aa10.97□□□□□ -0.65
HMGCS1-201ENST00000325110 OR3A1P47881 315 aa10.97□□□□□ -0.65
HMGCS1-201ENST00000325110 ID3Q02535 119 aa10.97□□□□□ -0.65
HMGCS1-201ENST00000325110 GFI1BQ5VTD9 330 aa10.97□□□□□ -0.65
HMGCS1-201ENST00000325110 ZNF709Q8N972 641 aa10.97□□□□□ -0.65
HMGCS1-201ENST00000325110 LYPD6BQ8NI32 183 aa10.97□□□□□ -0.65
HMGCS1-201ENST00000325110 FAM210BQ96KR6 192 aa10.97□□□□□ -0.65
HMGCS1-201ENST00000325110 MUC3AQ02505 3323 aa10.97□□□□□ -0.65
HMGCS1-201ENST00000325110 NTN3O00634 580 aaPredicted RBP10.97□□□□□ -0.65
HMGCS1-201ENST00000325110 MEOX1P50221 254 aa10.97□□□□□ -0.65
HMGCS1-201ENST00000325110 S100A12P80511 92 aa10.97□□□□□ -0.65
HMGCS1-201ENST00000325110 WDR25Q64LD2 544 aaPredicted RBP10.97□□□□□ -0.65
HMGCS1-201ENST00000325110 ZNF826PQ6ZT77 177 aa10.97□□□□□ -0.65
HMGCS1-201ENST00000325110 C1orf87Q8N0U7 546 aa10.97□□□□□ -0.65
HMGCS1-201ENST00000325110 OR5D13Q8NGL4 314 aa10.97□□□□□ -0.65
HMGCS1-201ENST00000325110 RAB40CQ96S21 281 aa10.97□□□□□ -0.65
HMGCS1-201ENST00000325110 ZNF703Q9H7S9 590 aaPredicted RBP10.97□□□□□ -0.65
HMGCS1-201ENST00000325110 AURKAIP1Q9NWT8 199 aaPredicted RBP10.97□□□□□ -0.65
HMGCS1-201ENST00000325110 FOXJ2Q9P0K8 574 aa10.97□□□□□ -0.65
HMGCS1-201ENST00000325110 IFNA1P01562 189 aa10.97□□□□□ -0.65
HMGCS1-201ENST00000325110 DEFA4P12838 97 aa10.97□□□□□ -0.65
HMGCS1-201ENST00000325110 HOXC12P31275 282 aa10.97□□□□□ -0.65
HMGCS1-201ENST00000325110 G6PCP35575 357 aa10.97□□□□□ -0.65
HMGCS1-201ENST00000325110 GFRA1P56159 465 aa10.97□□□□□ -0.65
HMGCS1-201ENST00000325110 SLC38A11Q08AI6 406 aa10.97□□□□□ -0.65
HMGCS1-201ENST00000325110 FAM53AQ6NSI3 398 aaPredicted RBP10.97□□□□□ -0.65
HMGCS1-201ENST00000325110 SPNS3Q6ZMD2 512 aa10.97□□□□□ -0.65
HMGCS1-201ENST00000325110 RTL8AQ9BWD3 113 aa10.97□□□□□ -0.65
HMGCS1-201ENST00000325110 OR2D2Q9H210 308 aa10.97□□□□□ -0.65
HMGCS1-201ENST00000325110 PRO1933Q9H354 126 aa10.97□□□□□ -0.65
HMGCS1-201ENST00000325110 PLSCR2Q9NRY7 297 aa10.97□□□□□ -0.65
HMGCS1-201ENST00000325110 IL17BQ9UHF5 180 aa10.97□□□□□ -0.65
HMGCS1-201ENST00000325110 TINAGQ9UJW2 476 aa10.97□□□□□ -0.65
HMGCS1-201ENST00000325110 CYC1P08574 325 aa10.96□□□□□ -0.65
HMGCS1-201ENST00000325110 CELA3BP08861 270 aa10.96□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 30.3 ms