RNA–Protein interactions for RNA: ENST00000322507.12

COL12A1-201, Transcript of collagen type XII alpha 1 chain, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene COL12A1, Length 11,723 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL12A1-201ENST00000322507 ANKRD20A5PA0PJZ0 165 aa8.6□□□□□ -1.03
COL12A1-201ENST00000322507 LANCL1O43813 399 aa8.6□□□□□ -1.03
COL12A1-201ENST00000322507 RPS16P62249 146 aaKnown RBP8.6□□□□□ -1.03
COL12A1-201ENST00000322507 PRSS54Q6PEW0 395 aa8.6□□□□□ -1.03
COL12A1-201ENST00000322507 LINC00696Q6ZRV3 163 aa8.6□□□□□ -1.03
COL12A1-201ENST00000322507 OR4X1Q8NH49 305 aa8.6□□□□□ -1.03
COL12A1-201ENST00000322507 ZNF707Q96C28 371 aaPredicted RBP8.6□□□□□ -1.03
COL12A1-201ENST00000322507 TRAV21A0A0B4J279 112 aa8.6□□□□□ -1.03
COL12A1-201ENST00000322507 A0A0B4J2E0 115 aa8.6□□□□□ -1.03
COL12A1-201ENST00000322507 A0A1B0GX12 115 aa8.6□□□□□ -1.03
COL12A1-201ENST00000322507 VEGFBP49765 207 aa8.6□□□□□ -1.03
COL12A1-201ENST00000322507 P2RY4P51582 365 aa8.6□□□□□ -1.03
COL12A1-201ENST00000322507 NUTF2P61970 127 aaKnown RBP8.6□□□□□ -1.03
COL12A1-201ENST00000322507 SLC38A11Q08AI6 406 aa8.6□□□□□ -1.03
COL12A1-201ENST00000322507 OR2V1Q8NHB1 315 aa8.6□□□□□ -1.03
COL12A1-201ENST00000322507 MS4A6AQ9H2W1 248 aa8.6□□□□□ -1.03
COL12A1-201ENST00000322507 COL5A3P25940 1745 aaPredicted RBP8.6□□□□□ -1.03
COL12A1-201ENST00000322507 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP8.6□□□□□ -1.03
COL12A1-201ENST00000322507 POLR2IP36954 125 aaKnown RBP8.6□□□□□ -1.03
COL12A1-201ENST00000322507 CLEC5AQ9NY25 188 aa8.6□□□□□ -1.03
COL12A1-201ENST00000322507 SERGEFQ9UGK8 458 aa8.6□□□□□ -1.03
COL12A1-201ENST00000322507 B9D1Q9UPM9 204 aa8.6□□□□□ -1.03
COL12A1-201ENST00000322507 CA11O75493 328 aa8.6□□□□□ -1.03
COL12A1-201ENST00000322507 SLC19A1P41440 591 aa8.6□□□□□ -1.03
COL12A1-201ENST00000322507 SLC25A2Q9BXI2 301 aa8.6□□□□□ -1.03
COL12A1-201ENST00000322507 TRAV8-1A0A0A6YYK1 113 aa8.6□□□□□ -1.03
COL12A1-201ENST00000322507 CSN3P07498 182 aa8.6□□□□□ -1.03
COL12A1-201ENST00000322507 HMGA1P17096 107 aaKnown RBP8.6□□□□□ -1.03
COL12A1-201ENST00000322507 RBPMS2Q6ZRY4 209 aaKnown RBP8.6□□□□□ -1.03
COL12A1-201ENST00000322507 OR5C1Q8NGR4 320 aa8.6□□□□□ -1.03
COL12A1-201ENST00000322507 FAM234AQ9H0X4 552 aa8.6□□□□□ -1.03
COL12A1-201ENST00000322507 ZNF665Q9H7R5 613 aa8.6□□□□□ -1.03
COL12A1-201ENST00000322507 UPK1AO00322 258 aa8.6□□□□□ -1.03
COL12A1-201ENST00000322507 NAAAQ02083 359 aa8.6□□□□□ -1.03
COL12A1-201ENST00000322507 GSG1Q2KHT4 349 aa8.6□□□□□ -1.03
COL12A1-201ENST00000322507 HSF4Q9ULV5 492 aa8.6□□□□□ -1.03
COL12A1-201ENST00000322507 A0A1W2PRS3 328 aa8.6□□□□□ -1.03
COL12A1-201ENST00000322507 EVI2AP22794 236 aa8.6□□□□□ -1.03
COL12A1-201ENST00000322507 TCF24Q7RTU0 167 aa8.6□□□□□ -1.03
COL12A1-201ENST00000322507 H1FOOQ8IZA3 346 aaPredicted RBP8.6□□□□□ -1.03
COL12A1-201ENST00000322507 TMEM230Q96A57 120 aa8.6□□□□□ -1.03
COL12A1-201ENST00000322507 C2orf88Q9BSF0 95 aa8.6□□□□□ -1.03
COL12A1-201ENST00000322507 C3orf80F5H4A9 247 aa8.6□□□□□ -1.03
COL12A1-201ENST00000322507 CDKN2AP42771 156 aaKnown RBP8.6□□□□□ -1.03
COL12A1-201ENST00000322507 P2RY1P47900 373 aa8.6□□□□□ -1.03
COL12A1-201ENST00000322507 TMEM211Q6ICI0 200 aa8.6□□□□□ -1.03
COL12A1-201ENST00000322507 TMEM207Q6UWW9 146 aa8.6□□□□□ -1.03
COL12A1-201ENST00000322507 C12orf49Q9H741 205 aa8.6□□□□□ -1.03
COL12A1-201ENST00000322507 ZGLP1P0C6A0 271 aa8.59□□□□□ -1.03
COL12A1-201ENST00000322507 PRSS8Q16651 343 aa8.59□□□□□ -1.03
COL12A1-201ENST00000322507 NXPH3O95157 252 aa8.59□□□□□ -1.03
COL12A1-201ENST00000322507 Q6ZNB5 142 aa8.59□□□□□ -1.03
COL12A1-201ENST00000322507 OR13H1Q8NG92 308 aa8.59□□□□□ -1.03
COL12A1-201ENST00000322507 OR11H12B2RN74 326 aa8.59□□□□□ -1.03
COL12A1-201ENST00000322507 ICOSLGO75144 302 aa8.59□□□□□ -1.03
COL12A1-201ENST00000322507 GNB1P62873 340 aa8.59□□□□□ -1.03
COL12A1-201ENST00000322507 SLC25A26Q70HW3 274 aa8.59□□□□□ -1.03
COL12A1-201ENST00000322507 OR11H1Q8NG94 326 aa8.59□□□□□ -1.03
COL12A1-201ENST00000322507 OR11H2Q8NH07 326 aa8.59□□□□□ -1.03
COL12A1-201ENST00000322507 SPATA25Q9BR10 227 aa8.59□□□□□ -1.03
COL12A1-201ENST00000322507 GHITMQ9H3K2 345 aa8.59□□□□□ -1.03
COL12A1-201ENST00000322507 CTDSPLO15194 276 aa8.59□□□□□ -1.03
COL12A1-201ENST00000322507 ZNF414Q96IQ9 312 aa8.59□□□□□ -1.03
COL12A1-201ENST00000322507 TNFRSF6BO95407 300 aa8.59□□□□□ -1.03
COL12A1-201ENST00000322507 MAS1LP35410 378 aa8.59□□□□□ -1.03
COL12A1-201ENST00000322507 ST3GAL2Q16842 350 aa8.59□□□□□ -1.03
COL12A1-201ENST00000322507 C9orf40Q8IXQ3 194 aa8.59□□□□□ -1.03
COL12A1-201ENST00000322507 ZNF576Q9H609 170 aa8.59□□□□□ -1.03
COL12A1-201ENST00000322507 ATP23Q9Y6H3 246 aa8.59□□□□□ -1.03
COL12A1-201ENST00000322507 CACNA1HO95180 2353 aa8.59□□□□□ -1.03
COL12A1-201ENST00000322507 TRAV2A0A0B4J234 112 aa8.59□□□□□ -1.03
COL12A1-201ENST00000322507 ACP1P24666 158 aa8.59□□□□□ -1.03
COL12A1-201ENST00000322507 TSPO2Q5TGU0 170 aa8.59□□□□□ -1.03
COL12A1-201ENST00000322507 RASL11AQ6T310 242 aa8.59□□□□□ -1.03
COL12A1-201ENST00000322507 SIRT6Q8N6T7 355 aa8.59□□□□□ -1.03
COL12A1-201ENST00000322507 MTFP1Q9UDX5 166 aa8.59□□□□□ -1.03
COL12A1-201ENST00000322507 CACNA1GO43497 2377 aa8.59□□□□□ -1.03
COL12A1-201ENST00000322507 TRAV8-7A0A075B6U6 113 aa8.59□□□□□ -1.03
COL12A1-201ENST00000322507 A8MWL6 223 aa8.59□□□□□ -1.03
COL12A1-201ENST00000322507 TIAL1Q01085 375 aaKnown RBP eCLIP8.59□□□□□ -1.03
COL12A1-201ENST00000322507 SLC25A37Q9NYZ2 338 aa8.59□□□□□ -1.03
COL12A1-201ENST00000322507 ADAM20O43506 726 aa8.59□□□□□ -1.03
COL12A1-201ENST00000322507 SOX8P57073 446 aa8.59□□□□□ -1.03
COL12A1-201ENST00000322507 ATXN8Q156A1 80 aa8.59□□□□□ -1.03
COL12A1-201ENST00000322507 NPDC1Q9NQX5 325 aaPredicted RBP8.59□□□□□ -1.03
COL12A1-201ENST00000322507 PPIL1Q9Y3C6 166 aa8.59□□□□□ -1.03
COL12A1-201ENST00000322507 TRBV23-1A0A0A0MS06 115 aa8.59□□□□□ -1.03
COL12A1-201ENST00000322507 FITM1A5D6W6 292 aa8.59□□□□□ -1.03
COL12A1-201ENST00000322507 GJB3O75712 270 aa8.59□□□□□ -1.03
COL12A1-201ENST00000322507 RTN4RL2Q86UN3 420 aa8.59□□□□□ -1.03
COL12A1-201ENST00000322507 F11RQ9Y624 299 aaKnown RBP8.59□□□□□ -1.03
COL12A1-201ENST00000322507 SHANK1Q9Y566 2161 aa8.59□□□□□ -1.04
COL12A1-201ENST00000322507 EFSO43281 561 aa8.59□□□□□ -1.04
COL12A1-201ENST00000322507 FGF17O60258 216 aa8.59□□□□□ -1.04
COL12A1-201ENST00000322507 OR1L8Q8NGR8 309 aa8.59□□□□□ -1.04
COL12A1-201ENST00000322507 RIF1Q5UIP0 2472 aaKnown RBP8.58□□□□□ -1.04
COL12A1-201ENST00000322507 RBMY1BA6NDE4 496 aaKnown RBP8.58□□□□□ -1.04
COL12A1-201ENST00000322507 RBMY1EA6NEQ0 496 aaKnown RBP8.58□□□□□ -1.04
COL12A1-201ENST00000322507 SLC25A20O43772 301 aa8.58□□□□□ -1.04
COL12A1-201ENST00000322507 RBMY1DP0C7P1 496 aaKnown RBP8.58□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 32.4 ms