RNA–Protein interactions for RNA: ENST00000316399.10

SOX6-201, Transcript of SRY-box 6, humanhuman

APPRIS P3 TSL 5 BASIC

Gene SOX6, Length 8,808 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SOX6-201ENST00000316399 TREM2Q9NZC2 230 aa6.28□□□□□ -1.4
SOX6-201ENST00000316399 CLN8Q9UBY8 286 aa6.28□□□□□ -1.4
SOX6-201ENST00000316399 SDK1Q7Z5N4 2213 aa6.28□□□□□ -1.4
SOX6-201ENST00000316399 A0A1B0GTH9 108 aa6.28□□□□□ -1.4
SOX6-201ENST00000316399 BCL3P20749 454 aa6.28□□□□□ -1.4
SOX6-201ENST00000316399 USF1P22415 310 aaPredicted RBP6.28□□□□□ -1.4
SOX6-201ENST00000316399 CALHM1Q8IU99 346 aa6.28□□□□□ -1.4
SOX6-201ENST00000316399 ZNF645Q8N7E2 425 aa6.28□□□□□ -1.4
SOX6-201ENST00000316399 NECAP1Q8NC96 275 aa6.28□□□□□ -1.4
SOX6-201ENST00000316399 OR10AC1Q8NH08 325 aa6.28□□□□□ -1.4
SOX6-201ENST00000316399 SAP30LQ9HAJ7 183 aa6.28□□□□□ -1.4
SOX6-201ENST00000316399 CCL28Q9NRJ3 127 aa6.28□□□□□ -1.4
SOX6-201ENST00000316399 DTX4Q9Y2E6 619 aa6.28□□□□□ -1.4
SOX6-201ENST00000316399 KLHDC2Q9Y2U9 406 aa6.28□□□□□ -1.4
SOX6-201ENST00000316399 SVILO95425 2214 aa6.28□□□□□ -1.4
SOX6-201ENST00000316399 IGKV1D-42A0A075B6H8 117 aa6.28□□□□□ -1.4
SOX6-201ENST00000316399 A0A087X0M5 115 aa6.28□□□□□ -1.4
SOX6-201ENST00000316399 A0A1B0GX30 115 aa6.28□□□□□ -1.4
SOX6-201ENST00000316399 NXPH3O95157 252 aa6.28□□□□□ -1.4
SOX6-201ENST00000316399 CFPP27918 469 aa6.28□□□□□ -1.4
SOX6-201ENST00000316399 CDX1P47902 265 aaPredicted RBP6.28□□□□□ -1.4
SOX6-201ENST00000316399 HERVK_113P61574 105 aa6.28□□□□□ -1.4
SOX6-201ENST00000316399 C12orf54Q6X4T0 127 aa6.28□□□□□ -1.4
SOX6-201ENST00000316399 NUP214P35658 2090 aaPredicted RBP6.28□□□□□ -1.4
SOX6-201ENST00000316399 K7ERU9 68 aa6.27□□□□□ -1.4
SOX6-201ENST00000316399 K7N7A8 449 aa6.27□□□□□ -1.4
SOX6-201ENST00000316399 CCL1P22362 96 aa6.27□□□□□ -1.4
SOX6-201ENST00000316399 SRSF7Q16629 238 aaKnown RBP eCLIP6.27□□□□□ -1.4
SOX6-201ENST00000316399 OR2B11Q5JQS5 317 aa6.27□□□□□ -1.4
SOX6-201ENST00000316399 DCAF12L2Q5VW00 463 aa6.27□□□□□ -1.4
SOX6-201ENST00000316399 PMS2CLQ68D20 193 aa6.27□□□□□ -1.4
SOX6-201ENST00000316399 FLYWCH2Q96CP2 140 aaKnown RBP6.27□□□□□ -1.4
SOX6-201ENST00000316399 LHFPL6Q9Y693 200 aa6.27□□□□□ -1.4
SOX6-201ENST00000316399 TRAV20A0A0B4J274 112 aa6.27□□□□□ -1.41
SOX6-201ENST00000316399 RPLP1P05386 114 aaKnown RBP6.27□□□□□ -1.41
SOX6-201ENST00000316399 TMIGD3P0DMS9 266 aaPredicted RBP6.27□□□□□ -1.41
SOX6-201ENST00000316399 IFITM2Q01629 132 aa6.27□□□□□ -1.41
SOX6-201ENST00000316399 HLA-DRB5Q30154 266 aa6.27□□□□□ -1.41
SOX6-201ENST00000316399 ABHD14AQ9BUJ0 271 aa6.27□□□□□ -1.41
SOX6-201ENST00000316399 JPT1Q9UK76 154 aa6.27□□□□□ -1.41
SOX6-201ENST00000316399 MRPS18CQ9Y3D5 142 aaKnown RBP6.27□□□□□ -1.41
SOX6-201ENST00000316399 BRCA1P38398 1863 aaKnown RBP6.27□□□□□ -1.41
SOX6-201ENST00000316399 IGHV5-10-1A0A0J9YXX1 117 aa6.27□□□□□ -1.41
SOX6-201ENST00000316399 GUCA2BQ16661 112 aa6.27□□□□□ -1.41
SOX6-201ENST00000316399 SLC23A3Q6PIS1 610 aa6.27□□□□□ -1.41
SOX6-201ENST00000316399 OR10AD1Q8NGE0 317 aa6.27□□□□□ -1.41
SOX6-201ENST00000316399 MRGPRDQ8TDS7 321 aa6.27□□□□□ -1.41
SOX6-201ENST00000316399 COPS9Q8WXC6 57 aa6.27□□□□□ -1.41
SOX6-201ENST00000316399 C5orf66Q9H5L9 145 aa6.27□□□□□ -1.41
SOX6-201ENST00000316399 IGHV1-45A0A0A0MS14 117 aa6.27□□□□□ -1.41
SOX6-201ENST00000316399 IGHV3-15A0A0B4J1V0 119 aa6.27□□□□□ -1.41
SOX6-201ENST00000316399 SLC31A2O15432 143 aa6.27□□□□□ -1.41
SOX6-201ENST00000316399 GLI4P10075 376 aa6.27□□□□□ -1.41
SOX6-201ENST00000316399 SLC25A53Q5H9E4 307 aa6.27□□□□□ -1.41
SOX6-201ENST00000316399 LRP11Q86VZ4 500 aa6.27□□□□□ -1.41
SOX6-201ENST00000316399 TUSC5Q8IXB3 177 aa6.27□□□□□ -1.41
SOX6-201ENST00000316399 OR2I1PQ8NGU4 316 aa6.27□□□□□ -1.41
SOX6-201ENST00000316399 TMEM37Q8WXS4 190 aa6.27□□□□□ -1.41
SOX6-201ENST00000316399 ATOH1Q92858 354 aaPredicted RBP6.27□□□□□ -1.41
SOX6-201ENST00000316399 SNX22Q96L94 193 aa6.27□□□□□ -1.41
SOX6-201ENST00000316399 CEP290O15078 2479 aa6.27□□□□□ -1.41
SOX6-201ENST00000316399 A0A0G2JK05 382 aa6.27□□□□□ -1.41
SOX6-201ENST00000316399 LYZL2Q7Z4W2 148 aa6.27□□□□□ -1.41
SOX6-201ENST00000316399 VPS25Q9BRG1 176 aa6.27□□□□□ -1.41
SOX6-201ENST00000316399 ATG101Q9BSB4 218 aa6.27□□□□□ -1.41
SOX6-201ENST00000316399 NPVFQ9HCQ7 196 aa6.27□□□□□ -1.41
SOX6-201ENST00000316399 COA4Q9NYJ1 87 aa6.27□□□□□ -1.41
SOX6-201ENST00000316399 OR4A8P0C604 315 aa6.27□□□□□ -1.41
SOX6-201ENST00000316399 MUC1P15941 1255 aaPredicted RBP6.27□□□□□ -1.41
SOX6-201ENST00000316399 C1QL3Q5VWW1 255 aa6.27□□□□□ -1.41
SOX6-201ENST00000316399 TMEM252Q8N6L7 170 aa6.27□□□□□ -1.41
SOX6-201ENST00000316399 CYB561D1Q8N8Q1 229 aa6.27□□□□□ -1.41
SOX6-201ENST00000316399 OR4C5Q8NGB2 326 aa6.27□□□□□ -1.41
SOX6-201ENST00000316399 ZDHHC8Q9ULC8 765 aa6.27□□□□□ -1.41
SOX6-201ENST00000316399 DOCK5Q9H7D0 1870 aa6.27□□□□□ -1.41
SOX6-201ENST00000316399 DAOP14920 347 aa6.27□□□□□ -1.41
SOX6-201ENST00000316399 ACP1P24666 158 aa6.27□□□□□ -1.41
SOX6-201ENST00000316399 P2RY4P51582 365 aa6.27□□□□□ -1.41
SOX6-201ENST00000316399 H2BFSP57053 126 aa6.27□□□□□ -1.41
SOX6-201ENST00000316399 GNB1P62873 340 aa6.27□□□□□ -1.41
SOX6-201ENST00000316399 PUSL1Q8N0Z8 303 aaKnown RBP6.27□□□□□ -1.41
SOX6-201ENST00000316399 WNT2BQ93097 391 aa6.27□□□□□ -1.41
SOX6-201ENST00000316399 TMEM54Q969K7 222 aa6.27□□□□□ -1.41
SOX6-201ENST00000316399 GNRHR2Q96P88 292 aa6.27□□□□□ -1.41
SOX6-201ENST00000316399 RASL11BQ9BPW5 248 aa6.27□□□□□ -1.41
SOX6-201ENST00000316399 COL25A1Q9BXS0 654 aaPredicted RBP6.27□□□□□ -1.41
SOX6-201ENST00000316399 SRSF10O75494 262 aaKnown RBP6.26□□□□□ -1.41
SOX6-201ENST00000316399 TGIF2LXQ8IUE1 241 aa6.26□□□□□ -1.41
SOX6-201ENST00000316399 OR8B3Q8NGG8 313 aa6.26□□□□□ -1.41
SOX6-201ENST00000316399 OR8B2Q96RD0 313 aa6.26□□□□□ -1.41
SOX6-201ENST00000316399 GNB4Q9HAV0 340 aa6.26□□□□□ -1.41
SOX6-201ENST00000316399 DICER1Q9UPY3 1922 aaKnown RBP6.26□□□□□ -1.41
SOX6-201ENST00000316399 A0A1B0GW64 132 aa6.26□□□□□ -1.41
SOX6-201ENST00000316399 LNP1A1A4G5 178 aa6.26□□□□□ -1.41
SOX6-201ENST00000316399 ANKRD36A6QL64 1941 aa6.26□□□□□ -1.41
SOX6-201ENST00000316399 MS4A18H0YCH9 400 aa6.26□□□□□ -1.41
SOX6-201ENST00000316399 MS4A18Q3C1V0 323 aa6.26□□□□□ -1.41
SOX6-201ENST00000316399 COL5A1-AS1Q5SY13 56 aa6.26□□□□□ -1.41
SOX6-201ENST00000316399 MMD2Q8IY49 270 aa6.26□□□□□ -1.41
SOX6-201ENST00000316399 LRTM2Q8N967 370 aa6.26□□□□□ -1.41
Retrieved 100 of 20,778 RNA–protein pairs in 32 ms