RNA–Protein interactions for RNA: ENST00000312481.11

COL6A5-202, Transcript of collagen type VI alpha 5 chain, humanhuman

TSL 1 (best)

Gene COL6A5, Length 9,226 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A5-202ENST00000312481 SLC25A53Q5H9E4 307 aa7.71□□□□□ -1.18
COL6A5-202ENST00000312481 HIST1H2BAQ96A08 127 aa7.71□□□□□ -1.18
COL6A5-202ENST00000312481 TWSG1Q9GZX9 223 aa7.71□□□□□ -1.18
COL6A5-202ENST00000312481 MTCH1Q9NZJ7 389 aa7.71□□□□□ -1.18
COL6A5-202ENST00000312481 PILRAQ9UKJ1 303 aa7.71□□□□□ -1.18
COL6A5-202ENST00000312481 MRPS16Q9Y3D3 137 aaKnown RBP7.71□□□□□ -1.18
COL6A5-202ENST00000312481 ZNF729A6NN14 1252 aaPredicted RBP7.71□□□□□ -1.18
COL6A5-202ENST00000312481 MKRN2OSH3BPM6 223 aa7.71□□□□□ -1.18
COL6A5-202ENST00000312481 RBFOX2O43251 390 aaKnown RBP eCLIP7.71□□□□□ -1.18
COL6A5-202ENST00000312481 VSIG8P0DPA2 414 aa7.71□□□□□ -1.18
COL6A5-202ENST00000312481 MRPL54Q6P161 138 aaKnown RBP7.71□□□□□ -1.18
COL6A5-202ENST00000312481 Q6ZS49 121 aa7.71□□□□□ -1.18
COL6A5-202ENST00000312481 CCL1P22362 96 aa7.7□□□□□ -1.18
COL6A5-202ENST00000312481 RPL24P83731 157 aaKnown RBP7.7□□□□□ -1.18
COL6A5-202ENST00000312481 CHCHD2P9Q5T1J5 151 aaPredicted RBP7.7□□□□□ -1.18
COL6A5-202ENST00000312481 OR4A5Q8NH83 315 aa7.7□□□□□ -1.18
COL6A5-202ENST00000312481 MRPL30Q8TCC3 161 aaKnown RBP7.7□□□□□ -1.18
COL6A5-202ENST00000312481 FAM131CQ96AQ9 280 aa7.7□□□□□ -1.18
COL6A5-202ENST00000312481 MENTQ9BUN1 341 aa7.7□□□□□ -1.18
COL6A5-202ENST00000312481 A0A1B0GTI1 187 aa7.7□□□□□ -1.18
COL6A5-202ENST00000312481 CEACAM6P40199 344 aa7.7□□□□□ -1.18
COL6A5-202ENST00000312481 B2MP61769 119 aa7.7□□□□□ -1.18
COL6A5-202ENST00000312481 FHL5Q5TD97 284 aa7.7□□□□□ -1.18
COL6A5-202ENST00000312481 MYPOPQ86VE0 399 aaPredicted RBP7.7□□□□□ -1.18
COL6A5-202ENST00000312481 THOC3Q96J01 351 aaKnown RBP7.7□□□□□ -1.18
COL6A5-202ENST00000312481 RSRP1Q9BUV0 290 aa7.7□□□□□ -1.18
COL6A5-202ENST00000312481 IZUMO4Q1ZYL8 232 aa7.7□□□□□ -1.18
COL6A5-202ENST00000312481 BOD1L2Q8IYS8 172 aa7.7□□□□□ -1.18
COL6A5-202ENST00000312481 ELOVL1Q9BW60 279 aa7.7□□□□□ -1.18
COL6A5-202ENST00000312481 ATXN7L1Q9ULK2 861 aaPredicted RBP7.7□□□□□ -1.18
COL6A5-202ENST00000312481 H3BMH7 237 aa7.7□□□□□ -1.18
COL6A5-202ENST00000312481 KLF7O75840 302 aaPredicted RBP7.7□□□□□ -1.18
COL6A5-202ENST00000312481 CD160O95971 181 aa7.7□□□□□ -1.18
COL6A5-202ENST00000312481 ZNF883P0CG24 379 aa7.7□□□□□ -1.18
COL6A5-202ENST00000312481 G6PCP35575 357 aa7.7□□□□□ -1.18
COL6A5-202ENST00000312481 SRSF5Q13243 272 aaKnown RBP7.7□□□□□ -1.18
COL6A5-202ENST00000312481 IGSF11Q5DX21 431 aa7.7□□□□□ -1.18
COL6A5-202ENST00000312481 C2CD4CQ8TF44 421 aa7.7□□□□□ -1.18
COL6A5-202ENST00000312481 NXPH1P58417 271 aa7.7□□□□□ -1.18
COL6A5-202ENST00000312481 ZNF506Q5JVG8 444 aa7.7□□□□□ -1.18
COL6A5-202ENST00000312481 DHRS11Q6UWP2 260 aa7.7□□□□□ -1.18
COL6A5-202ENST00000312481 CYP2G1PQ6ZSU1 146 aa7.7□□□□□ -1.18
COL6A5-202ENST00000312481 HSD17B8Q92506 261 aa7.7□□□□□ -1.18
COL6A5-202ENST00000312481 Q96M66 194 aa7.7□□□□□ -1.18
COL6A5-202ENST00000312481 GPR82Q96P67 336 aa7.7□□□□□ -1.18
COL6A5-202ENST00000312481 PPP1R3CQ9UQK1 317 aa7.7□□□□□ -1.18
COL6A5-202ENST00000312481 LY96Q9Y6Y9 160 aa7.7□□□□□ -1.18
COL6A5-202ENST00000312481 TRGV5A0A0B4J1U4 118 aa7.7□□□□□ -1.18
COL6A5-202ENST00000312481 ZNF260Q3ZCT1 412 aa7.7□□□□□ -1.18
COL6A5-202ENST00000312481 CST9Q5W186 159 aa7.7□□□□□ -1.18
COL6A5-202ENST00000312481 LINC00114Q6XXX2 140 aa7.7□□□□□ -1.18
COL6A5-202ENST00000312481 LURAP1LQ8IV03 231 aa7.7□□□□□ -1.18
COL6A5-202ENST00000312481 WDFY1Q8IWB7 410 aa7.7□□□□□ -1.18
COL6A5-202ENST00000312481 OR2H1Q9GZK4 316 aa7.7□□□□□ -1.18
COL6A5-202ENST00000312481 SRD5A3Q9H8P0 318 aa7.7□□□□□ -1.18
COL6A5-202ENST00000312481 FLRT3Q9NZU0 649 aa7.7□□□□□ -1.18
COL6A5-202ENST00000312481 PCDH15Q96QU1 1955 aa7.7□□□□□ -1.18
COL6A5-202ENST00000312481 SYNGR1O43759 233 aa7.7□□□□□ -1.18
COL6A5-202ENST00000312481 TSPAN2O60636 221 aa7.7□□□□□ -1.18
COL6A5-202ENST00000312481 UPK3AO75631 287 aa7.7□□□□□ -1.18
COL6A5-202ENST00000312481 P01737 135 aa7.7□□□□□ -1.18
COL6A5-202ENST00000312481 B4GALT1P15291 398 aa7.7□□□□□ -1.18
COL6A5-202ENST00000312481 MOGAT1Q96PD6 335 aa7.7□□□□□ -1.18
COL6A5-202ENST00000312481 GPR27Q9NS67 375 aa7.7□□□□□ -1.18
COL6A5-202ENST00000312481 KCNE3Q9Y6H6 103 aa7.7□□□□□ -1.18
COL6A5-202ENST00000312481 J3QRE1 110 aa7.69□□□□□ -1.18
COL6A5-202ENST00000312481 AQP7O14520 342 aa7.69□□□□□ -1.18
COL6A5-202ENST00000312481 HPXP02790 462 aa7.69□□□□□ -1.18
COL6A5-202ENST00000312481 TMEM50BP56557 158 aa7.69□□□□□ -1.18
COL6A5-202ENST00000312481 EDDM3BP56851 147 aa7.69□□□□□ -1.18
COL6A5-202ENST00000312481 NHLH1Q02575 133 aa7.69□□□□□ -1.18
COL6A5-202ENST00000312481 BPIFA4PQ86YQ2 179 aa7.69□□□□□ -1.18
COL6A5-202ENST00000312481 FAM24BQ8N5W8 94 aa7.69□□□□□ -1.18
COL6A5-202ENST00000312481 ARL6IP6Q8N6S5 226 aa7.69□□□□□ -1.18
COL6A5-202ENST00000312481 GATAD1Q8WUU5 269 aa7.69□□□□□ -1.18
COL6A5-202ENST00000312481 TMEM14DPA8MWL7 114 aa7.69□□□□□ -1.18
COL6A5-202ENST00000312481 KBTBD11O94819 623 aa7.69□□□□□ -1.18
COL6A5-202ENST00000312481 IFITM3Q01628 133 aa7.69□□□□□ -1.18
COL6A5-202ENST00000312481 JOSD1Q15040 202 aaPredicted RBP7.69□□□□□ -1.18
COL6A5-202ENST00000312481 C12orf76Q8N812 135 aaPredicted RBP7.69□□□□□ -1.18
COL6A5-202ENST00000312481 RELTQ969Z4 430 aa7.69□□□□□ -1.18
COL6A5-202ENST00000312481 ZNF596Q8TC21 504 aa7.69□□□□□ -1.18
COL6A5-202ENST00000312481 NDUFB3O43676 98 aa7.69□□□□□ -1.18
COL6A5-202ENST00000312481 GCM2O75603 506 aaPredicted RBP7.69□□□□□ -1.18
COL6A5-202ENST00000312481 OR10G3Q8NGC4 313 aa7.69□□□□□ -1.18
COL6A5-202ENST00000312481 SPSB4Q96A44 273 aa7.69□□□□□ -1.18
COL6A5-202ENST00000312481 MED29Q9NX70 200 aa7.69□□□□□ -1.18
COL6A5-202ENST00000312481 DOK5Q9P104 306 aa7.69□□□□□ -1.18
COL6A5-202ENST00000312481 ERRFI1Q9UJM3 462 aaPredicted RBP7.69□□□□□ -1.18
COL6A5-202ENST00000312481 ODAMA1E959 279 aa7.69□□□□□ -1.18
COL6A5-202ENST00000312481 TMEM229AB2RXF0 380 aa7.69□□□□□ -1.18
COL6A5-202ENST00000312481 MAS1LP35410 378 aa7.69□□□□□ -1.18
COL6A5-202ENST00000312481 OR3A4PP47883 348 aa7.69□□□□□ -1.18
COL6A5-202ENST00000312481 ZNF146Q15072 292 aa7.69□□□□□ -1.18
COL6A5-202ENST00000312481 DHCR7Q9UBM7 475 aaKnown RBP7.69□□□□□ -1.18
COL6A5-202ENST00000312481 MS4A18H0YCH9 400 aa7.69□□□□□ -1.18
COL6A5-202ENST00000312481 TNFSF11O14788 317 aa7.69□□□□□ -1.18
COL6A5-202ENST00000312481 HLA-DRB5Q30154 266 aa7.69□□□□□ -1.18
COL6A5-202ENST00000312481 MS4A18Q3C1V0 323 aa7.69□□□□□ -1.18
COL6A5-202ENST00000312481 Q6ZN92 141 aa7.69□□□□□ -1.18
Retrieved 100 of 20,778 RNA–protein pairs in 32.3 ms