RNA–Protein interactions for RNA: ENST00000309964.8

CLOCK-201, Transcript of clock circadian regulator, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CLOCK, Length 10,304 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLOCK-201ENST00000309964 FNDC7Q5VTL7 733 aa2.78□□□□□ -1.96
CLOCK-201ENST00000309964 OR9G1Q8NH87 305 aa2.78□□□□□ -1.96
CLOCK-201ENST00000309964 KCNK17Q96T54 332 aa2.78□□□□□ -1.96
CLOCK-201ENST00000309964 PCGF1Q9BSM1 259 aa2.78□□□□□ -1.96
CLOCK-201ENST00000309964 SEC11CQ9BY50 192 aa2.78□□□□□ -1.96
CLOCK-201ENST00000309964 HSPB8Q9UJY1 196 aa2.78□□□□□ -1.96
CLOCK-201ENST00000309964 CHST2Q9Y4C5 530 aa2.78□□□□□ -1.96
CLOCK-201ENST00000309964 SYNGR2O43760 224 aa2.78□□□□□ -1.96
CLOCK-201ENST00000309964 FCGR3BO75015 233 aa2.78□□□□□ -1.96
CLOCK-201ENST00000309964 PTGER1P34995 402 aa2.78□□□□□ -1.96
CLOCK-201ENST00000309964 P2RY1P47900 373 aa2.78□□□□□ -1.96
CLOCK-201ENST00000309964 TNXAQ16473 311 aa2.78□□□□□ -1.96
CLOCK-201ENST00000309964 FAM27D1Q5T7N8 215 aa2.78□□□□□ -1.96
CLOCK-201ENST00000309964 ZNF645Q8N7E2 425 aa2.78□□□□□ -1.96
CLOCK-201ENST00000309964 OR13C5Q8NGS8 318 aa2.78□□□□□ -1.96
CLOCK-201ENST00000309964 DCTN5Q9BTE1 182 aa2.78□□□□□ -1.96
CLOCK-201ENST00000309964 SMIM3Q9BZL3 60 aa2.78□□□□□ -1.96
CLOCK-201ENST00000309964 CACNG5Q9UF02 275 aa2.78□□□□□ -1.96
CLOCK-201ENST00000309964 ZNF230Q9UIE0 474 aaPredicted RBP2.78□□□□□ -1.96
CLOCK-201ENST00000309964 PILRAQ9UKJ1 303 aa2.78□□□□□ -1.96
CLOCK-201ENST00000309964 TMEM56-RWDD3S4R434 201 aa2.78□□□□□ -1.96
CLOCK-201ENST00000309964 IGHV1-69-2A0A0G2JMI3 117 aa2.78□□□□□ -1.96
CLOCK-201ENST00000309964 SLC25A5P05141 298 aaKnown RBP2.78□□□□□ -1.96
CLOCK-201ENST00000309964 MAS1LP35410 378 aa2.78□□□□□ -1.96
CLOCK-201ENST00000309964 CD81P60033 236 aa2.78□□□□□ -1.96
CLOCK-201ENST00000309964 IQCJQ1A5X6 159 aa2.78□□□□□ -1.96
CLOCK-201ENST00000309964 RSPO4Q2I0M5 234 aaPredicted RBP2.78□□□□□ -1.96
CLOCK-201ENST00000309964 VAX1Q5SQQ9 334 aa2.78□□□□□ -1.96
CLOCK-201ENST00000309964 SEZ6L2Q6UXD5 910 aa2.78□□□□□ -1.96
CLOCK-201ENST00000309964 GTSCR1Q86UQ5 136 aa2.78□□□□□ -1.96
CLOCK-201ENST00000309964 ADIPOR1Q96A54 375 aa2.78□□□□□ -1.96
CLOCK-201ENST00000309964 SNRNP40Q96DI7 357 aaKnown RBP2.78□□□□□ -1.96
CLOCK-201ENST00000309964 RAX2Q96IS3 184 aa2.78□□□□□ -1.96
CLOCK-201ENST00000309964 OR5M11Q96RB7 305 aa2.78□□□□□ -1.96
CLOCK-201ENST00000309964 PSG11Q9UQ72 335 aa2.78□□□□□ -1.96
CLOCK-201ENST00000309964 NEUROG3Q9Y4Z2 214 aa2.78□□□□□ -1.96
CLOCK-201ENST00000309964 SCGB1D1O95968 90 aa2.78□□□□□ -1.96
CLOCK-201ENST00000309964 ARG1P05089 322 aa2.78□□□□□ -1.96
CLOCK-201ENST00000309964 OR3A4PP47883 348 aa2.78□□□□□ -1.96
CLOCK-201ENST00000309964 SUMO1P63165 101 aaKnown RBP2.78□□□□□ -1.96
CLOCK-201ENST00000309964 KLF9Q13886 244 aaPredicted RBP2.78□□□□□ -1.96
CLOCK-201ENST00000309964 WDR38Q5JTN6 314 aa2.78□□□□□ -1.96
CLOCK-201ENST00000309964 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa2.78□□□□□ -1.96
CLOCK-201ENST00000309964 ZNF600Q6ZNG1 722 aa2.78□□□□□ -1.96
CLOCK-201ENST00000309964 CENPVQ7Z7K6 275 aaPredicted RBP2.78□□□□□ -1.96
CLOCK-201ENST00000309964 EEF1AKMT3Q96AZ1 226 aa2.78□□□□□ -1.96
CLOCK-201ENST00000309964 PGLYRP3Q96LB9 341 aa2.78□□□□□ -1.96
CLOCK-201ENST00000309964 LURAP1Q96LR2 239 aa2.78□□□□□ -1.96
CLOCK-201ENST00000309964 NTN4Q9HB63 628 aa2.78□□□□□ -1.96
CLOCK-201ENST00000309964 JPT1Q9UK76 154 aa2.78□□□□□ -1.96
CLOCK-201ENST00000309964 KCNK7Q9Y2U2 307 aa2.78□□□□□ -1.96
CLOCK-201ENST00000309964 LOC105371242A0A075B767 164 aa2.78□□□□□ -1.96
CLOCK-201ENST00000309964 A0A0U1RQS6 177 aa2.78□□□□□ -1.96
CLOCK-201ENST00000309964 A0A1W2PPV9 198 aa2.78□□□□□ -1.96
CLOCK-201ENST00000309964 TMEM229AB2RXF0 380 aa2.78□□□□□ -1.96
CLOCK-201ENST00000309964 CD3DP04234 171 aa2.78□□□□□ -1.96
CLOCK-201ENST00000309964 CTLA4P16410 223 aa2.78□□□□□ -1.96
CLOCK-201ENST00000309964 GABRB1P18505 474 aa2.78□□□□□ -1.96
CLOCK-201ENST00000309964 BTF3P20290 206 aaKnown RBP2.78□□□□□ -1.96
CLOCK-201ENST00000309964 COL8A1P27658 744 aa2.78□□□□□ -1.96
CLOCK-201ENST00000309964 FCER1GP30273 86 aa2.78□□□□□ -1.96
CLOCK-201ENST00000309964 CDAP32320 146 aa2.78□□□□□ -1.96
CLOCK-201ENST00000309964 SLC38A11Q08AI6 406 aa2.78□□□□□ -1.96
CLOCK-201ENST00000309964 SMN1Q16637 294 aaKnown RBP2.78□□□□□ -1.96
CLOCK-201ENST00000309964 FFAR4Q5NUL3 377 aa2.78□□□□□ -1.96
CLOCK-201ENST00000309964 CELF2-AS1Q8N7Q2 184 aa2.78□□□□□ -1.96
CLOCK-201ENST00000309964 OR5M8Q8NGP6 311 aa2.78□□□□□ -1.96
CLOCK-201ENST00000309964 RAB24Q969Q5 203 aa2.78□□□□□ -1.96
CLOCK-201ENST00000309964 OR10C1Q96KK4 312 aa2.78□□□□□ -1.96
CLOCK-201ENST00000309964 MRPS18AQ9NVS2 196 aaKnown RBP2.78□□□□□ -1.96
CLOCK-201ENST00000309964 MTCH1Q9NZJ7 389 aa2.78□□□□□ -1.96
CLOCK-201ENST00000309964 METRNQ9UJH8 293 aa2.78□□□□□ -1.96
CLOCK-201ENST00000309964 ZNF320A2RRD8 509 aa2.78□□□□□ -1.96
CLOCK-201ENST00000309964 OOSP1A8MZH6 123 aa2.78□□□□□ -1.96
CLOCK-201ENST00000309964 UBE2L6O14933 153 aa2.78□□□□□ -1.96
CLOCK-201ENST00000309964 IGHMP01871 453 aa2.78□□□□□ -1.96
CLOCK-201ENST00000309964 HPXP02790 462 aa2.78□□□□□ -1.96
CLOCK-201ENST00000309964 TRGC1P0CF51 173 aa2.78□□□□□ -1.96
CLOCK-201ENST00000309964 CCKARP32238 428 aa2.78□□□□□ -1.96
CLOCK-201ENST00000309964 TIMP3P35625 211 aa2.78□□□□□ -1.96
CLOCK-201ENST00000309964 DLX6P56179 175 aa2.78□□□□□ -1.96
CLOCK-201ENST00000309964 HIST1H3AP68431 136 aa2.78□□□□□ -1.96
CLOCK-201ENST00000309964 OSR1Q8TAX0 266 aaPredicted RBP2.78□□□□□ -1.96
CLOCK-201ENST00000309964 CTHRC1Q96CG8 243 aa2.78□□□□□ -1.96
CLOCK-201ENST00000309964 MARVELD1Q9BSK0 173 aa2.78□□□□□ -1.96
CLOCK-201ENST00000309964 CLEC7AQ9BXN2 247 aa2.78□□□□□ -1.96
CLOCK-201ENST00000309964 TMPRSS13Q9BYE2 586 aa2.78□□□□□ -1.96
CLOCK-201ENST00000309964 SLC35B3Q9H1N7 401 aa2.78□□□□□ -1.96
CLOCK-201ENST00000309964 MMP26Q9NRE1 261 aa2.78□□□□□ -1.96
CLOCK-201ENST00000309964 KCNE3Q9Y6H6 103 aa2.78□□□□□ -1.96
CLOCK-201ENST00000309964 IGLV3-12A0A075B6K2 115 aa2.78□□□□□ -1.97
CLOCK-201ENST00000309964 ZNF705GA8MUZ8 300 aaPredicted RBP2.78□□□□□ -1.97
CLOCK-201ENST00000309964 A8MWL6 223 aa2.78□□□□□ -1.97
CLOCK-201ENST00000309964 HAX1O00165 279 aa2.78□□□□□ -1.97
CLOCK-201ENST00000309964 LILRA1O75019 489 aa2.78□□□□□ -1.97
CLOCK-201ENST00000309964 MT-ND6P03923 174 aa2.78□□□□□ -1.97
CLOCK-201ENST00000309964 CCL3P10147 92 aa2.78□□□□□ -1.97
CLOCK-201ENST00000309964 ZP3P21754 424 aa2.78□□□□□ -1.97
CLOCK-201ENST00000309964 DEFA6Q01524 100 aa2.78□□□□□ -1.97
CLOCK-201ENST00000309964 SAPCD1Q5SSQ6 148 aa2.78□□□□□ -1.97
Retrieved 100 of 20,778 RNA–protein pairs in 33.3 ms