RNA–Protein interactions for RNA: ENST00000306042.9

PTPRE-202, Transcript of protein tyrosine phosphatase, receptor type E, humanhuman

TSL 1 (best) BASIC

Gene PTPRE, Length 4,957 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRE-202ENST00000306042 ZNF436Q9C0F3 470 aaPredicted RBP7.88□□□□□ -1.15
PTPRE-202ENST00000306042 ARV1Q9H2C2 271 aa7.88□□□□□ -1.15
PTPRE-202ENST00000306042 PARP11Q9NR21 331 aa7.88□□□□□ -1.15
PTPRE-202ENST00000306042 NSG2Q9Y328 171 aa7.88□□□□□ -1.15
PTPRE-202ENST00000306042 AGAP20933 346 aa7.88□□□□□ -1.15
PTPRE-202ENST00000306042 ZNF672Q499Z4 452 aaPredicted RBP7.88□□□□□ -1.15
PTPRE-202ENST00000306042 OR4C13Q8NGP0 309 aa7.88□□□□□ -1.15
PTPRE-202ENST00000306042 FAM213BQ8TBF2 198 aa7.88□□□□□ -1.15
PTPRE-202ENST00000306042 SLIRPQ9GZT3 109 aaKnown RBP7.88□□□□□ -1.15
PTPRE-202ENST00000306042 DNASE2O00115 360 aaPredicted RBP7.88□□□□□ -1.15
PTPRE-202ENST00000306042 CEACAM4O75871 244 aa7.88□□□□□ -1.15
PTPRE-202ENST00000306042 FCGR3AP08637 254 aa7.88□□□□□ -1.15
PTPRE-202ENST00000306042 PSMB6P28072 239 aa7.88□□□□□ -1.15
PTPRE-202ENST00000306042 ARL16Q0P5N6 197 aa7.88□□□□□ -1.15
PTPRE-202ENST00000306042 TBC1D26Q86UD7 250 aa7.88□□□□□ -1.15
PTPRE-202ENST00000306042 CCDC190Q86UF4 302 aa7.88□□□□□ -1.15
PTPRE-202ENST00000306042 CELF2-AS1Q8N7Q2 184 aa7.88□□□□□ -1.15
PTPRE-202ENST00000306042 PGLYRP3Q96LB9 341 aa7.88□□□□□ -1.15
PTPRE-202ENST00000306042 OR5B12Q96R08 314 aa7.88□□□□□ -1.15
PTPRE-202ENST00000306042 NRIP2Q9BQI9 281 aa7.88□□□□□ -1.15
PTPRE-202ENST00000306042 TMEM165Q9HC07 324 aa7.88□□□□□ -1.15
PTPRE-202ENST00000306042 BEX4Q9NWD9 120 aaPredicted RBP7.88□□□□□ -1.15
PTPRE-202ENST00000306042 ZNF785A8K8V0 405 aa7.88□□□□□ -1.15
PTPRE-202ENST00000306042 COX7A2P2O60397 106 aa7.88□□□□□ -1.15
PTPRE-202ENST00000306042 S100A6P06703 90 aa7.88□□□□□ -1.15
PTPRE-202ENST00000306042 USF1P22415 310 aaPredicted RBP7.88□□□□□ -1.15
PTPRE-202ENST00000306042 CRYGSP22914 178 aa7.88□□□□□ -1.15
PTPRE-202ENST00000306042 EFNB2P52799 333 aa7.88□□□□□ -1.15
PTPRE-202ENST00000306042 TMEM30BQ3MIR4 351 aa7.88□□□□□ -1.15
PTPRE-202ENST00000306042 KCNIP4Q6PIL6 250 aa7.88□□□□□ -1.15
PTPRE-202ENST00000306042 GINS3Q9BRX5 216 aa7.88□□□□□ -1.15
PTPRE-202ENST00000306042 RSRP1Q9BUV0 290 aa7.88□□□□□ -1.15
PTPRE-202ENST00000306042 PRNDQ9UKY0 176 aa7.88□□□□□ -1.15
PTPRE-202ENST00000306042 COL4A3Q01955 1670 aa7.88□□□□□ -1.15
PTPRE-202ENST00000306042 HBE1P02100 147 aa7.87□□□□□ -1.15
PTPRE-202ENST00000306042 OR5AC1P0C628 307 aa7.87□□□□□ -1.15
PTPRE-202ENST00000306042 RHEBQ15382 184 aa7.87□□□□□ -1.15
PTPRE-202ENST00000306042 MPPED2Q15777 294 aa7.87□□□□□ -1.15
PTPRE-202ENST00000306042 BAK1Q16611 211 aa7.87□□□□□ -1.15
PTPRE-202ENST00000306042 NCMAPQ5T1S8 102 aa7.87□□□□□ -1.15
PTPRE-202ENST00000306042 FGFBP3Q8TAT2 258 aa7.87□□□□□ -1.15
PTPRE-202ENST00000306042 ZNRF4Q8WWF5 429 aa7.87□□□□□ -1.15
PTPRE-202ENST00000306042 SLX1AQ9BQ83 275 aa7.87□□□□□ -1.15
PTPRE-202ENST00000306042 DENND4CQ5VZ89 1909 aa7.87□□□□□ -1.15
PTPRE-202ENST00000306042 I3L521 148 aa7.87□□□□□ -1.15
PTPRE-202ENST00000306042 NDUFS8O00217 210 aa7.87□□□□□ -1.15
PTPRE-202ENST00000306042 RHBDL1O75783 438 aa7.87□□□□□ -1.15
PTPRE-202ENST00000306042 CTSDP07339 412 aaPredicted RBP7.87□□□□□ -1.15
PTPRE-202ENST00000306042 CEACAM8P31997 349 aaPredicted RBP7.87□□□□□ -1.15
PTPRE-202ENST00000306042 NKX2-5P52952 324 aaPredicted RBP7.87□□□□□ -1.15
PTPRE-202ENST00000306042 PAFAH1B2P68402 229 aa7.87□□□□□ -1.15
PTPRE-202ENST00000306042 SURF2Q15527 256 aaPredicted RBP7.87□□□□□ -1.15
PTPRE-202ENST00000306042 ZNF674Q2M3X9 581 aa7.87□□□□□ -1.15
PTPRE-202ENST00000306042 C1orf100Q5SVJ3 147 aa7.87□□□□□ -1.15
PTPRE-202ENST00000306042 SLC25A42Q86VD7 318 aa7.87□□□□□ -1.15
PTPRE-202ENST00000306042 POC1AQ8NBT0 407 aa7.87□□□□□ -1.15
PTPRE-202ENST00000306042 OR5R1Q8NH85 324 aa7.87□□□□□ -1.15
PTPRE-202ENST00000306042 OR1L1Q8NH94 360 aa7.87□□□□□ -1.15
PTPRE-202ENST00000306042 DCTN5Q9BTE1 182 aa7.87□□□□□ -1.15
PTPRE-202ENST00000306042 LPAR5Q9H1C0 372 aa7.87□□□□□ -1.15
PTPRE-202ENST00000306042 IGF2RP11717 2491 aa7.87□□□□□ -1.15
PTPRE-202ENST00000306042 A6NNC1 897 aa7.87□□□□□ -1.15
PTPRE-202ENST00000306042 SNRPGP15A8MWD9 76 aa7.87□□□□□ -1.15
PTPRE-202ENST00000306042 UBA52P62987 128 aaKnown RBP7.87□□□□□ -1.15
PTPRE-202ENST00000306042 WDFY1Q8IWB7 410 aa7.87□□□□□ -1.15
PTPRE-202ENST00000306042 RBPMSQ93062 196 aaKnown RBP7.87□□□□□ -1.15
PTPRE-202ENST00000306042 WDFY2Q96P53 400 aa7.87□□□□□ -1.15
PTPRE-202ENST00000306042 PLEKHA2Q9HB19 425 aa7.87□□□□□ -1.15
PTPRE-202ENST00000306042 WASHC3Q9Y3C0 194 aa7.87□□□□□ -1.15
PTPRE-202ENST00000306042 V9GYS6 101 aa7.87□□□□□ -1.15
PTPRE-202ENST00000306042 TRBV5-7A0A0A0MS05 114 aa7.87□□□□□ -1.15
PTPRE-202ENST00000306042 GNG7O60262 68 aa7.87□□□□□ -1.15
PTPRE-202ENST00000306042 B3GALNT1O75752 331 aa7.87□□□□□ -1.15
PTPRE-202ENST00000306042 CD200P41217 278 aa7.87□□□□□ -1.15
PTPRE-202ENST00000306042 NPBWR1P48145 328 aa7.87□□□□□ -1.15
PTPRE-202ENST00000306042 SPINK9Q5DT21 86 aa7.87□□□□□ -1.15
PTPRE-202ENST00000306042 DYNLRB2Q8TF09 96 aa7.87□□□□□ -1.15
PTPRE-202ENST00000306042 ZNF486Q96H40 463 aaPredicted RBP7.87□□□□□ -1.15
PTPRE-202ENST00000306042 ABHD14BQ96IU4 210 aa7.87□□□□□ -1.15
PTPRE-202ENST00000306042 ABHD1Q96SE0 405 aa7.87□□□□□ -1.15
PTPRE-202ENST00000306042 RANGRFQ9HD47 186 aaPredicted RBP7.87□□□□□ -1.15
PTPRE-202ENST00000306042 Q9N2K0 584 aa7.87□□□□□ -1.15
PTPRE-202ENST00000306042 ADAM10O14672 748 aa7.86□□□□□ -1.15
PTPRE-202ENST00000306042 OR7C2O60412 319 aa7.86□□□□□ -1.15
PTPRE-202ENST00000306042 IGHV1-46P01743 117 aa7.86□□□□□ -1.15
PTPRE-202ENST00000306042 F2RP25116 425 aa7.86□□□□□ -1.15
PTPRE-202ENST00000306042 OR2B8PP59922 312 aa7.86□□□□□ -1.15
PTPRE-202ENST00000306042 PROK2Q9HC23 129 aa7.86□□□□□ -1.15
PTPRE-202ENST00000306042 DPRXA6NFQ7 191 aa7.86□□□□□ -1.15
PTPRE-202ENST00000306042 NDUFB6O95139 128 aa7.86□□□□□ -1.15
PTPRE-202ENST00000306042 APELAP0DMC3 54 aa7.86□□□□□ -1.15
PTPRE-202ENST00000306042 IGFL2Q6UWQ7 119 aa7.86□□□□□ -1.15
PTPRE-202ENST00000306042 HOGA1Q86XE5 327 aa7.86□□□□□ -1.15
PTPRE-202ENST00000306042 FAM90A1Q86YD7 464 aa7.86□□□□□ -1.15
PTPRE-202ENST00000306042 OR1L8Q8NGR8 309 aa7.86□□□□□ -1.15
PTPRE-202ENST00000306042 NMES1Q9C002 83 aa7.86□□□□□ -1.15
PTPRE-202ENST00000306042 LSM2Q9Y333 95 aaKnown RBP7.86□□□□□ -1.15
PTPRE-202ENST00000306042 RPL12P30050 165 aaKnown RBP7.86□□□□□ -1.15
PTPRE-202ENST00000306042 CENPVQ7Z7K6 275 aaPredicted RBP7.86□□□□□ -1.15
PTPRE-202ENST00000306042 LRP11Q86VZ4 500 aa7.86□□□□□ -1.15
Retrieved 100 of 20,778 RNA–protein pairs in 26.1 ms