RNA–Protein interactions for RNA: ENST00000304236.2

RAB40A-201, Transcript of RAB40A, member RAS oncogene family, humanhuman

APPRIS P1 TSL 2 BASIC

Gene RAB40A, Length 1,969 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB40A-201ENST00000304236 EIF5A2Q9GZV4 153 aaKnown RBP12.04□□□□□ -0.48
RAB40A-201ENST00000304236 SH3BGRL3Q9H299 93 aa12.04□□□□□ -0.48
RAB40A-201ENST00000304236 SPRR3Q9UBC9 169 aa12.04□□□□□ -0.48
RAB40A-201ENST00000304236 A0A1B0GU03 582 aa12.03□□□□□ -0.48
RAB40A-201ENST00000304236 BTBD17A6NE02 478 aa12.03□□□□□ -0.48
RAB40A-201ENST00000304236 GNLYP22749 145 aa12.03□□□□□ -0.48
RAB40A-201ENST00000304236 NFYBP25208 207 aa12.03□□□□□ -0.48
RAB40A-201ENST00000304236 CXorf66Q5JRM2 361 aaPredicted RBP12.03□□□□□ -0.48
RAB40A-201ENST00000304236 C20orf204Q6ZNR8 217 aa12.03□□□□□ -0.48
RAB40A-201ENST00000304236 TMEM182Q6ZP80 229 aaPredicted RBP12.03□□□□□ -0.48
RAB40A-201ENST00000304236 P4HA3Q7Z4N8 544 aa12.03□□□□□ -0.48
RAB40A-201ENST00000304236 C5orf24Q7Z6I8 188 aa12.03□□□□□ -0.48
RAB40A-201ENST00000304236 C15orf54Q8N8G6 183 aa12.03□□□□□ -0.48
RAB40A-201ENST00000304236 OR10V1Q8NGI7 309 aa12.03□□□□□ -0.48
RAB40A-201ENST00000304236 OR2G3Q8NGZ4 309 aa12.03□□□□□ -0.48
RAB40A-201ENST00000304236 CDH20Q9HBT6 801 aa12.03□□□□□ -0.48
RAB40A-201ENST00000304236 SERPINE2P07093 398 aa12.03□□□□□ -0.48
RAB40A-201ENST00000304236 SELEP16581 610 aa12.03□□□□□ -0.48
RAB40A-201ENST00000304236 ATP6V0CP27449 155 aa12.03□□□□□ -0.48
RAB40A-201ENST00000304236 UQCRFS1P47985 274 aa12.03□□□□□ -0.48
RAB40A-201ENST00000304236 UBE2NP61088 152 aaKnown RBP12.03□□□□□ -0.48
RAB40A-201ENST00000304236 CLINT1Q14677 625 aa12.03□□□□□ -0.48
RAB40A-201ENST00000304236 FAM213BQ8TBF2 198 aa12.03□□□□□ -0.48
RAB40A-201ENST00000304236 PLPPR1Q8TBJ4 325 aa12.03□□□□□ -0.48
RAB40A-201ENST00000304236 PSMG3-AS1Q96PY0 264 aa12.03□□□□□ -0.48
RAB40A-201ENST00000304236 OR51B6Q9H340 312 aa12.03□□□□□ -0.48
RAB40A-201ENST00000304236 ERRFI1Q9UJM3 462 aaPredicted RBP12.03□□□□□ -0.48
RAB40A-201ENST00000304236 AGFG2O95081 481 aa12.02□□□□□ -0.49
RAB40A-201ENST00000304236 HOXB1P14653 301 aaPredicted RBP12.02□□□□□ -0.49
RAB40A-201ENST00000304236 ZNF14P17017 642 aaPredicted RBP12.02□□□□□ -0.49
RAB40A-201ENST00000304236 PPP1CBP62140 327 aa12.02□□□□□ -0.49
RAB40A-201ENST00000304236 GABRA6Q16445 453 aa12.02□□□□□ -0.49
RAB40A-201ENST00000304236 RBMXL3Q8N7X1 1067 aaKnown RBP12.02□□□□□ -0.49
RAB40A-201ENST00000304236 OR5C1Q8NGR4 320 aa12.02□□□□□ -0.49
RAB40A-201ENST00000304236 LSM10Q969L4 123 aaKnown RBP12.02□□□□□ -0.49
RAB40A-201ENST00000304236 MAGT1Q9H0U3 335 aa12.02□□□□□ -0.49
RAB40A-201ENST00000304236 SLC35B3Q9H1N7 401 aa12.02□□□□□ -0.49
RAB40A-201ENST00000304236 BIN3Q9NQY0 253 aa12.02□□□□□ -0.49
RAB40A-201ENST00000304236 KLF2Q9Y5W3 355 aaPredicted RBP12.02□□□□□ -0.49
RAB40A-201ENST00000304236 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP12.01□□□□□ -0.49
RAB40A-201ENST00000304236 CHST1O43916 411 aa12.01□□□□□ -0.49
RAB40A-201ENST00000304236 SMPD2O60906 423 aa12.01□□□□□ -0.49
RAB40A-201ENST00000304236 RHBDL1O75783 438 aa12.01□□□□□ -0.49
RAB40A-201ENST00000304236 FOLR2P14207 255 aa12.01□□□□□ -0.49
RAB40A-201ENST00000304236 RAC2P15153 192 aa12.01□□□□□ -0.49
RAB40A-201ENST00000304236 FHITP49789 147 aa12.01□□□□□ -0.49
RAB40A-201ENST00000304236 RAB13P51153 203 aa12.01□□□□□ -0.49
RAB40A-201ENST00000304236 DYNLT3P51808 116 aa12.01□□□□□ -0.49
RAB40A-201ENST00000304236 ERVK11-1P61568 191 aa12.01□□□□□ -0.49
RAB40A-201ENST00000304236 RPL23AP62750 156 aaKnown RBP12.01□□□□□ -0.49
RAB40A-201ENST00000304236 C17orf78Q8N4C9 275 aa12.01□□□□□ -0.49
RAB40A-201ENST00000304236 RXFP4Q8TDU9 374 aa12.01□□□□□ -0.49
RAB40A-201ENST00000304236 RAB40CQ96S21 281 aa12.01□□□□□ -0.49
RAB40A-201ENST00000304236 SAV1Q9H4B6 383 aaPredicted RBP12.01□□□□□ -0.49
RAB40A-201ENST00000304236 TUBA4BQ9H853 241 aa12.01□□□□□ -0.49
RAB40A-201ENST00000304236 TMEM210A6NLX4 147 aa12.01□□□□□ -0.49
RAB40A-201ENST00000304236 COLCA2A8K830 154 aa12.01□□□□□ -0.49
RAB40A-201ENST00000304236 TNFSF12O43508 249 aa12.01□□□□□ -0.49
RAB40A-201ENST00000304236 DFFBO76075 338 aa12.01□□□□□ -0.49
RAB40A-201ENST00000304236 ACAA1P09110 424 aaPredicted RBP12.01□□□□□ -0.49
RAB40A-201ENST00000304236 CD200P41217 278 aa12.01□□□□□ -0.49
RAB40A-201ENST00000304236 ESPL1Q14674 2120 aa12.01□□□□□ -0.49
RAB40A-201ENST00000304236 RNFT1Q5M7Z0 435 aa12.01□□□□□ -0.49
RAB40A-201ENST00000304236 SPATA46Q5T0L3 261 aa12.01□□□□□ -0.49
RAB40A-201ENST00000304236 DPPA3Q6W0C5 159 aa12.01□□□□□ -0.49
RAB40A-201ENST00000304236 ZNF497Q6ZNH5 498 aa12.01□□□□□ -0.49
RAB40A-201ENST00000304236 STX12Q86Y82 276 aa12.01□□□□□ -0.49
RAB40A-201ENST00000304236 Q8NA96 180 aa12.01□□□□□ -0.49
RAB40A-201ENST00000304236 SCCPDHQ8NBX0 429 aa12.01□□□□□ -0.49
RAB40A-201ENST00000304236 GPR146Q96CH1 333 aa12.01□□□□□ -0.49
RAB40A-201ENST00000304236 KCNJ16Q9NPI9 418 aa12.01□□□□□ -0.49
RAB40A-201ENST00000304236 RNF115Q9Y4L5 304 aa12.01□□□□□ -0.49
RAB40A-201ENST00000304236 SH2D1BO14796 132 aa12□□□□□ -0.49
RAB40A-201ENST00000304236 CRYBA1P05813 215 aa12□□□□□ -0.49
RAB40A-201ENST00000304236 PGA5P0DJD9 388 aa12□□□□□ -0.49
RAB40A-201ENST00000304236 OMGP23515 440 aa12□□□□□ -0.49
RAB40A-201ENST00000304236 ASCL1P50553 236 aa12□□□□□ -0.49
RAB40A-201ENST00000304236 ZNF146Q15072 292 aa12□□□□□ -0.49
RAB40A-201ENST00000304236 FIP1L1Q6UN15 594 aaKnown RBP12□□□□□ -0.49
RAB40A-201ENST00000304236 TMEM171Q8WVE6 324 aa12□□□□□ -0.49
RAB40A-201ENST00000304236 GPHA2Q96T91 129 aa12□□□□□ -0.49
RAB40A-201ENST00000304236 ATP5SQ99766 215 aa12□□□□□ -0.49
RAB40A-201ENST00000304236 EGLN1Q9GZT9 426 aa12□□□□□ -0.49
RAB40A-201ENST00000304236 UNKLQ9H9P5 680 aaKnown RBP12□□□□□ -0.49
RAB40A-201ENST00000304236 RPS10P5Q9NQ39 176 aa12□□□□□ -0.49
RAB40A-201ENST00000304236 TAAR3PQ9P1P4 343 aa12□□□□□ -0.49
RAB40A-201ENST00000304236 MEX3AA1L020 520 aaKnown RBP11.99□□□□□ -0.49
RAB40A-201ENST00000304236 IQCF6A8MYZ5 107 aa11.99□□□□□ -0.49
RAB40A-201ENST00000304236 SLC33A1O00400 549 aaPredicted RBP11.99□□□□□ -0.49
RAB40A-201ENST00000304236 CNOT4O95628 575 aaKnown RBP11.99□□□□□ -0.49
RAB40A-201ENST00000304236 OR2H2O95918 312 aa11.99□□□□□ -0.49
RAB40A-201ENST00000304236 HOXA1P49639 335 aaPredicted RBP11.99□□□□□ -0.49
RAB40A-201ENST00000304236 TNFSF10P50591 281 aa11.99□□□□□ -0.49
RAB40A-201ENST00000304236 RAB2AP61019 212 aa11.99□□□□□ -0.49
RAB40A-201ENST00000304236 PRR30Q53SZ7 412 aaPredicted RBP11.99□□□□□ -0.49
RAB40A-201ENST00000304236 IGFL3Q6UXB1 125 aa11.99□□□□□ -0.49
RAB40A-201ENST00000304236 RNASE11Q8TAA1 199 aaKnown RBP11.99□□□□□ -0.49
RAB40A-201ENST00000304236 OR2J1Q9GZK6 312 aa11.99□□□□□ -0.49
RAB40A-201ENST00000304236 TRAPPC2LQ9UL33 140 aa11.99□□□□□ -0.49
RAB40A-201ENST00000304236 WIPI2Q9Y4P8 454 aa11.99□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 46.2 ms