RNA–Protein interactions for RNA: ENST00000295911.6

CLRN1-201, Transcript of clarin 1, humanhuman

TSL 1 (best) BASIC

Gene CLRN1, Length 1,444 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLRN1-201ENST00000295911 TOLLIPQ9H0E2 274 aa7.78□□□□□ -1.16
CLRN1-201ENST00000295911 PLEKHF2Q9H8W4 249 aa7.78□□□□□ -1.16
CLRN1-201ENST00000295911 MSL2Q9HCI7 577 aa7.78□□□□□ -1.16
CLRN1-201ENST00000295911 MMP26Q9NRE1 261 aa7.78□□□□□ -1.16
CLRN1-201ENST00000295911 LIN7CQ9NUP9 197 aaKnown RBP7.78□□□□□ -1.16
CLRN1-201ENST00000295911 ASF1BQ9NVP2 202 aa7.78□□□□□ -1.16
CLRN1-201ENST00000295911 ELOVL5Q9NYP7 299 aa7.78□□□□□ -1.16
CLRN1-201ENST00000295911 OR1A1Q9P1Q5 309 aa7.78□□□□□ -1.16
CLRN1-201ENST00000295911 FZR1Q9UM11 496 aa7.78□□□□□ -1.16
CLRN1-201ENST00000295911 CUL9Q8IWT3 2517 aa7.78□□□□□ -1.16
CLRN1-201ENST00000295911 B8ZZF3 427 aa7.78□□□□□ -1.16
CLRN1-201ENST00000295911 K7EM74 188 aa7.78□□□□□ -1.16
CLRN1-201ENST00000295911 LGALS8O00214 317 aa7.78□□□□□ -1.16
CLRN1-201ENST00000295911 WNT9BO14905 357 aa7.78□□□□□ -1.16
CLRN1-201ENST00000295911 ADAM20O43506 726 aa7.78□□□□□ -1.16
CLRN1-201ENST00000295911 PSPNO60542 156 aa7.78□□□□□ -1.16
CLRN1-201ENST00000295911 SEC11BP0C7V7 166 aa7.78□□□□□ -1.16
CLRN1-201ENST00000295911 IL2RGP31785 369 aa7.78□□□□□ -1.16
CLRN1-201ENST00000295911 RAB5CP51148 216 aa7.78□□□□□ -1.16
CLRN1-201ENST00000295911 NKX6-1P78426 367 aaPredicted RBP7.78□□□□□ -1.16
CLRN1-201ENST00000295911 ID3Q02535 119 aa7.78□□□□□ -1.16
CLRN1-201ENST00000295911 PRAMEF6Q5VXH4 476 aa7.78□□□□□ -1.16
CLRN1-201ENST00000295911 ZNF826PQ6ZT77 177 aa7.78□□□□□ -1.16
CLRN1-201ENST00000295911 PRR18Q8N4B5 295 aa7.78□□□□□ -1.16
CLRN1-201ENST00000295911 OR2C3Q8N628 320 aa7.78□□□□□ -1.16
CLRN1-201ENST00000295911 TCTEX1D1Q8N7M0 179 aa7.78□□□□□ -1.16
CLRN1-201ENST00000295911 OR1S2Q8NGQ3 325 aa7.78□□□□□ -1.16
CLRN1-201ENST00000295911 SUN5Q8TC36 379 aa7.78□□□□□ -1.16
CLRN1-201ENST00000295911 FAM216AQ8WUB2 273 aa7.78□□□□□ -1.16
CLRN1-201ENST00000295911 LRRC29Q8WV35 223 aa7.78□□□□□ -1.16
CLRN1-201ENST00000295911 NINJ1Q92982 152 aa7.78□□□□□ -1.16
CLRN1-201ENST00000295911 GINS3Q9BRX5 216 aa7.78□□□□□ -1.16
CLRN1-201ENST00000295911 C11orf1Q9H5F2 150 aa7.78□□□□□ -1.16
CLRN1-201ENST00000295911 NARFLQ9H6Q4 476 aa7.78□□□□□ -1.16
CLRN1-201ENST00000295911 FAM212BQ9NTI7 297 aaPredicted RBP7.78□□□□□ -1.16
CLRN1-201ENST00000295911 UFSP2Q9NUQ7 469 aa7.78□□□□□ -1.16
CLRN1-201ENST00000295911 DUSP13Q9UII6 198 aa7.78□□□□□ -1.16
CLRN1-201ENST00000295911 PRR14LQ5THK1 2151 aa7.77□□□□□ -1.17
CLRN1-201ENST00000295911 IGLV3-9A0A075B6K5 115 aa7.77□□□□□ -1.17
CLRN1-201ENST00000295911 IGHV3-64DA0A0J9YX35 117 aa7.77□□□□□ -1.17
CLRN1-201ENST00000295911 WRBO00258 174 aa7.77□□□□□ -1.17
CLRN1-201ENST00000295911 TNFSF12O43508 249 aa7.77□□□□□ -1.17
CLRN1-201ENST00000295911 ATG12O94817 140 aa7.77□□□□□ -1.17
CLRN1-201ENST00000295911 PRDX2P32119 198 aa7.77□□□□□ -1.17
CLRN1-201ENST00000295911 COL10A1Q03692 680 aa7.77□□□□□ -1.17
CLRN1-201ENST00000295911 BAXQ07812 192 aa7.77□□□□□ -1.17
CLRN1-201ENST00000295911 ZNF266Q14584 549 aa7.77□□□□□ -1.17
CLRN1-201ENST00000295911 KRBOX4Q5JUW0 171 aa7.77□□□□□ -1.17
CLRN1-201ENST00000295911 FAM219AQ8IW50 185 aa7.77□□□□□ -1.17
CLRN1-201ENST00000295911 SPACA3Q8IXA5 215 aa7.77□□□□□ -1.17
CLRN1-201ENST00000295911 Q8N3U1 123 aa7.77□□□□□ -1.17
CLRN1-201ENST00000295911 ZNF645Q8N7E2 425 aa7.77□□□□□ -1.17
CLRN1-201ENST00000295911 OR51H1Q8NH63 302 aa7.77□□□□□ -1.17
CLRN1-201ENST00000295911 RNASE11Q8TAA1 199 aaKnown RBP7.77□□□□□ -1.17
CLRN1-201ENST00000295911 PARP11Q9NR21 331 aa7.77□□□□□ -1.17
CLRN1-201ENST00000295911 LYRM2Q9NU23 88 aaPredicted RBP7.77□□□□□ -1.17
CLRN1-201ENST00000295911 KCNS2Q9ULS6 477 aa7.77□□□□□ -1.17
CLRN1-201ENST00000295911 PPP1R3CQ9UQK1 317 aa7.77□□□□□ -1.17
CLRN1-201ENST00000295911 TP53TG5Q9Y2B4 290 aa7.77□□□□□ -1.17
CLRN1-201ENST00000295911 TANC2Q9HCD6 1990 aa7.76□□□□□ -1.17
CLRN1-201ENST00000295911 TRAV39A0A0B4J263 110 aa7.76□□□□□ -1.17
CLRN1-201ENST00000295911 SRRM5B3KS81 715 aa7.76□□□□□ -1.17
CLRN1-201ENST00000295911 C12orf77C9JDV5 145 aa7.76□□□□□ -1.17
CLRN1-201ENST00000295911 K7ENP7 123 aa7.76□□□□□ -1.17
CLRN1-201ENST00000295911 SPINT2O43291 252 aa7.76□□□□□ -1.17
CLRN1-201ENST00000295911 PITX3O75364 302 aa7.76□□□□□ -1.17
CLRN1-201ENST00000295911 MED6O75586 246 aa7.76□□□□□ -1.17
CLRN1-201ENST00000295911 IGLV2-14P01704 120 aa7.76□□□□□ -1.17
CLRN1-201ENST00000295911 HBZP02008 142 aa7.76□□□□□ -1.17
CLRN1-201ENST00000295911 ADH4P08319 380 aa7.76□□□□□ -1.17
CLRN1-201ENST00000295911 OR8U9P0C7N5 309 aa7.76□□□□□ -1.17
CLRN1-201ENST00000295911 SPP1P10451 314 aa7.76□□□□□ -1.17
CLRN1-201ENST00000295911 PSG2P11465 335 aa7.76□□□□□ -1.17
CLRN1-201ENST00000295911 GZMHP20718 246 aa7.76□□□□□ -1.17
CLRN1-201ENST00000295911 GABRA2P47869 451 aa7.76□□□□□ -1.17
CLRN1-201ENST00000295911 OR3A1P47881 315 aa7.76□□□□□ -1.17
CLRN1-201ENST00000295911 CEBPDP49716 269 aaPredicted RBP7.76□□□□□ -1.17
CLRN1-201ENST00000295911 TDGF1P3P51864 188 aa7.76□□□□□ -1.17
CLRN1-201ENST00000295911 POLR2GP62487 172 aaKnown RBP eCLIP7.76□□□□□ -1.17
CLRN1-201ENST00000295911 RPL23AP62750 156 aaKnown RBP7.76□□□□□ -1.17
CLRN1-201ENST00000295911 HTD2P86397 168 aa7.76□□□□□ -1.17
CLRN1-201ENST00000295911 EWSR1Q01844 656 aaKnown RBP eCLIP7.76□□□□□ -1.17
CLRN1-201ENST00000295911 AESQ08117 197 aa7.76□□□□□ -1.17
CLRN1-201ENST00000295911 PJVKQ0ZLH3 352 aa7.76□□□□□ -1.17
CLRN1-201ENST00000295911 TBR1Q16650 682 aa7.76□□□□□ -1.17
CLRN1-201ENST00000295911 ZGRF1Q86YA3 2104 aa7.76□□□□□ -1.17
CLRN1-201ENST00000295911 DOLPP1Q86YN1 238 aa7.76□□□□□ -1.17
CLRN1-201ENST00000295911 RPRMLQ8N4K4 120 aa7.76□□□□□ -1.17
CLRN1-201ENST00000295911 COMMD1Q8N668 190 aa7.76□□□□□ -1.17
CLRN1-201ENST00000295911 DRAM1Q8N682 238 aa7.76□□□□□ -1.17
CLRN1-201ENST00000295911 BPIFCQ8NFQ6 507 aa7.76□□□□□ -1.17
CLRN1-201ENST00000295911 OR8U1Q8NH10 309 aa7.76□□□□□ -1.17
CLRN1-201ENST00000295911 ERGIC1Q969X5 290 aa7.76□□□□□ -1.17
CLRN1-201ENST00000295911 SNX22Q96L94 193 aa7.76□□□□□ -1.17
CLRN1-201ENST00000295911 RAB40CQ96S21 281 aa7.76□□□□□ -1.17
CLRN1-201ENST00000295911 SMIM3Q9BZL3 60 aa7.76□□□□□ -1.17
CLRN1-201ENST00000295911 NCOR1P1Q9H4R4 102 aa7.76□□□□□ -1.17
CLRN1-201ENST00000295911 RAB9BQ9NP90 201 aa7.76□□□□□ -1.17
CLRN1-201ENST00000295911 TPSG1Q9NRR2 321 aa7.76□□□□□ -1.17
CLRN1-201ENST00000295911 LUZP4Q9P127 313 aa7.76□□□□□ -1.17
Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms