RNA–Protein interactions for RNA: ENST00000288398.10

TPM1-202, Transcript of tropomyosin 1, humanhuman

TSL 1 (best) BASIC

Gene TPM1, Length 1,295 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-202ENST00000288398 ST6GALNAC6Q969X2 333 aa11.03□□□□□ -0.64
TPM1-202ENST00000288398 OR14A2Q96R54 314 aa11.03□□□□□ -0.64
TPM1-202ENST00000288398 ZNF251Q9BRH9 671 aa11.03□□□□□ -0.64
TPM1-202ENST00000288398 CST11Q9H112 138 aa11.03□□□□□ -0.64
TPM1-202ENST00000288398 BANF2Q9H503 90 aa11.03□□□□□ -0.64
TPM1-202ENST00000288398 RCC2Q9P258 522 aaKnown RBP11.03□□□□□ -0.64
TPM1-202ENST00000288398 CLEC2DQ9UHP7 191 aa11.03□□□□□ -0.64
TPM1-202ENST00000288398 DNAH3Q8TD57 4116 aa11.02□□□□□ -0.64
TPM1-202ENST00000288398 TRAV8-7A0A075B6U6 113 aa11.02□□□□□ -0.65
TPM1-202ENST00000288398 UBE2QL1A1L167 161 aa11.02□□□□□ -0.65
TPM1-202ENST00000288398 EFCAB10A6NFE3 127 aa11.02□□□□□ -0.65
TPM1-202ENST00000288398 ZNF736B4DX44 427 aaPredicted RBP11.02□□□□□ -0.65
TPM1-202ENST00000288398 EBAG9O00559 213 aa11.02□□□□□ -0.65
TPM1-202ENST00000288398 SLC31A2O15432 143 aa11.02□□□□□ -0.65
TPM1-202ENST00000288398 LANCL1O43813 399 aa11.02□□□□□ -0.65
TPM1-202ENST00000288398 GLAP06280 429 aa11.02□□□□□ -0.65
TPM1-202ENST00000288398 SLC2A2P11168 524 aaPredicted RBP11.02□□□□□ -0.65
TPM1-202ENST00000288398 ECI1P42126 302 aa11.02□□□□□ -0.65
TPM1-202ENST00000288398 LUMP51884 338 aaPredicted RBP11.02□□□□□ -0.65
TPM1-202ENST00000288398 ZNF137PP52743 207 aa11.02□□□□□ -0.65
TPM1-202ENST00000288398 DOC2BQ14184 412 aa11.02□□□□□ -0.65
TPM1-202ENST00000288398 CT45A1Q5HYN5 189 aa11.02□□□□□ -0.65
TPM1-202ENST00000288398 OR1L1Q8NH94 360 aa11.02□□□□□ -0.65
TPM1-202ENST00000288398 CT45A3Q8NHU0 189 aa11.02□□□□□ -0.65
TPM1-202ENST00000288398 C4orf3Q8WVX3 66 aa11.02□□□□□ -0.65
TPM1-202ENST00000288398 KCTD7Q96MP8 289 aa11.02□□□□□ -0.65
TPM1-202ENST00000288398 CHCHD6Q9BRQ6 235 aa11.02□□□□□ -0.65
TPM1-202ENST00000288398 ABHD14AQ9BUJ0 271 aa11.02□□□□□ -0.65
TPM1-202ENST00000288398 TAF9BQ9HBM6 251 aa11.02□□□□□ -0.65
TPM1-202ENST00000288398 C8orf4Q9NR00 106 aa11.02□□□□□ -0.65
TPM1-202ENST00000288398 ABRACLQ9P1F3 81 aa11.02□□□□□ -0.65
TPM1-202ENST00000288398 KIAA1456Q9P272 454 aa11.02□□□□□ -0.65
TPM1-202ENST00000288398 ERGIC3Q9Y282 383 aa11.02□□□□□ -0.65
TPM1-202ENST00000288398 MAGEA13PA6NCF6 341 aa11.01□□□□□ -0.65
TPM1-202ENST00000288398 LY86O95711 162 aa11.01□□□□□ -0.65
TPM1-202ENST00000288398 LALBAP00709 142 aa11.01□□□□□ -0.65
TPM1-202ENST00000288398 IGHG4P01861 327 aa11.01□□□□□ -0.65
TPM1-202ENST00000288398 RCC1P18754 421 aaPredicted RBP11.01□□□□□ -0.65
TPM1-202ENST00000288398 ST3GAL4Q11206 333 aa11.01□□□□□ -0.65
TPM1-202ENST00000288398 LSAMPQ13449 338 aa11.01□□□□□ -0.65
TPM1-202ENST00000288398 LRRC36Q1X8D7 754 aa11.01□□□□□ -0.65
TPM1-202ENST00000288398 NKAPLQ5M9Q1 402 aa11.01□□□□□ -0.65
TPM1-202ENST00000288398 FAM53AQ6NSI3 398 aaPredicted RBP11.01□□□□□ -0.65
TPM1-202ENST00000288398 DHRSXQ8N5I4 330 aa11.01□□□□□ -0.65
TPM1-202ENST00000288398 FAM71E2Q8N5Q1 922 aa11.01□□□□□ -0.65
TPM1-202ENST00000288398 ZNF439Q8NDP4 499 aa11.01□□□□□ -0.65
TPM1-202ENST00000288398 GALMQ96C23 342 aa11.01□□□□□ -0.65
TPM1-202ENST00000288398 NEDD4LQ96PU5 975 aa11.01□□□□□ -0.65
TPM1-202ENST00000288398 HSPB9Q9BQS6 159 aa11.01□□□□□ -0.65
TPM1-202ENST00000288398 PARP11Q9NR21 331 aa11.01□□□□□ -0.65
TPM1-202ENST00000288398 PLSCR3Q9NRY6 295 aa11.01□□□□□ -0.65
TPM1-202ENST00000288398 GHRLQ9UBU3 117 aa11.01□□□□□ -0.65
TPM1-202ENST00000288398 JPT1Q9UK76 154 aa11.01□□□□□ -0.65
TPM1-202ENST00000288398 TRBV5-7A0A0A0MS05 114 aa11□□□□□ -0.65
TPM1-202ENST00000288398 PDCD6O75340 191 aa11□□□□□ -0.65
TPM1-202ENST00000288398 IGF1P05019 195 aa11□□□□□ -0.65
TPM1-202ENST00000288398 OR8U8P0C7N1 319 aa11□□□□□ -0.65
TPM1-202ENST00000288398 CELP19835 753 aa11□□□□□ -0.65
TPM1-202ENST00000288398 F2RL1P55085 397 aa11□□□□□ -0.65
TPM1-202ENST00000288398 ZNF260Q3ZCT1 412 aa11□□□□□ -0.65
TPM1-202ENST00000288398 ZNF554Q86TJ5 538 aa11□□□□□ -0.65
TPM1-202ENST00000288398 RNF152Q8N8N0 203 aa11□□□□□ -0.65
TPM1-202ENST00000288398 OR2AK2Q8NG84 335 aa11□□□□□ -0.65
TPM1-202ENST00000288398 FAM46BQ96A09 425 aa11□□□□□ -0.65
TPM1-202ENST00000288398 PGLYRP3Q96LB9 341 aa11□□□□□ -0.65
TPM1-202ENST00000288398 UQCC2Q9BRT2 126 aa11□□□□□ -0.65
TPM1-202ENST00000288398 CHMP1AQ9HD42 196 aaPredicted RBP11□□□□□ -0.65
TPM1-202ENST00000288398 STEAP1Q9UHE8 339 aa11□□□□□ -0.65
TPM1-202ENST00000288398 LRRC42Q9Y546 428 aa11□□□□□ -0.65
TPM1-202ENST00000288398 UBBP0CG47 229 aa10.99□□□□□ -0.65
TPM1-202ENST00000288398 PPP1CCP36873 323 aaKnown RBP10.99□□□□□ -0.65
TPM1-202ENST00000288398 ZNF134P52741 427 aa10.99□□□□□ -0.65
TPM1-202ENST00000288398 ACTBP60709 375 aa10.99□□□□□ -0.65
TPM1-202ENST00000288398 RPS11P62280 158 aaKnown RBP eCLIP10.99□□□□□ -0.65
TPM1-202ENST00000288398 PLGLAQ15195 96 aa10.99□□□□□ -0.65
TPM1-202ENST00000288398 MORN2Q502X0 79 aa10.99□□□□□ -0.65
TPM1-202ENST00000288398 C8orf59Q8N0T1 100 aaPredicted RBP10.99□□□□□ -0.65
TPM1-202ENST00000288398 PACRGLQ8N7B6 248 aa10.99□□□□□ -0.65
TPM1-202ENST00000288398 OR11H1Q8NG94 326 aa10.99□□□□□ -0.65
TPM1-202ENST00000288398 OR52L2PQ8NGH6 319 aa10.99□□□□□ -0.65
TPM1-202ENST00000288398 GGHQ92820 318 aa10.99□□□□□ -0.65
TPM1-202ENST00000288398 Q96M66 194 aa10.99□□□□□ -0.65
TPM1-202ENST00000288398 DERL3Q96Q80 235 aa10.99□□□□□ -0.65
TPM1-202ENST00000288398 PRR25Q96S07 402 aa10.99□□□□□ -0.65
TPM1-202ENST00000288398 CNOT2Q9NZN8 540 aaKnown RBP10.99□□□□□ -0.65
TPM1-202ENST00000288398 ZNF580Q9UK33 172 aa10.99□□□□□ -0.65
TPM1-202ENST00000288398 VSIG4Q9Y279 399 aa10.99□□□□□ -0.65
TPM1-202ENST00000288398 WSB1Q9Y6I7 421 aa10.99□□□□□ -0.65
TPM1-202ENST00000288398 U3KQK5 164 aa10.99□□□□□ -0.65
TPM1-202ENST00000288398 NBEAL2Q6ZNJ1 2754 aa10.98□□□□□ -0.65
TPM1-202ENST00000288398 NBR2O15453 112 aa10.98□□□□□ -0.65
TPM1-202ENST00000288398 SC5DO75845 299 aa10.98□□□□□ -0.65
TPM1-202ENST00000288398 VSIG8P0DPA2 414 aa10.98□□□□□ -0.65
TPM1-202ENST00000288398 PSMB8P28062 276 aa10.98□□□□□ -0.65
TPM1-202ENST00000288398 INSL3P51460 131 aa10.98□□□□□ -0.65
TPM1-202ENST00000288398 WNT4P56705 351 aa10.98□□□□□ -0.65
TPM1-202ENST00000288398 ADARB1P78563 741 aaKnown RBP10.98□□□□□ -0.65
TPM1-202ENST00000288398 HTD2P86397 168 aa10.98□□□□□ -0.65
TPM1-202ENST00000288398 CFHR3Q02985 330 aa10.98□□□□□ -0.65
TPM1-202ENST00000288398 GNMTQ14749 295 aa10.98□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 37.6 ms