RNA–Protein interactions for RNA: ENST00000287766.8

SLC6A1-201, Transcript of solute carrier family 6 member 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SLC6A1, Length 4,502 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLC6A1-201ENST00000287766 FAM87AP0C7U9 286 aa10.92□□□□□ -0.66
SLC6A1-201ENST00000287766 PRF1P14222 555 aa10.92□□□□□ -0.66
SLC6A1-201ENST00000287766 HLA-GP17693 338 aa10.92□□□□□ -0.66
SLC6A1-201ENST00000287766 HTR1DP28221 377 aa10.92□□□□□ -0.66
SLC6A1-201ENST00000287766 PPP1CCP36873 323 aaKnown RBP10.92□□□□□ -0.66
SLC6A1-201ENST00000287766 C1orf100Q5SVJ3 147 aa10.92□□□□□ -0.66
SLC6A1-201ENST00000287766 DENND4CQ5VZ89 1909 aa10.92□□□□□ -0.66
SLC6A1-201ENST00000287766 C1QL2Q7Z5L3 287 aa10.92□□□□□ -0.66
SLC6A1-201ENST00000287766 APCDD1LQ8NCL9 501 aa10.92□□□□□ -0.66
SLC6A1-201ENST00000287766 OR11L1Q8NGX0 322 aa10.92□□□□□ -0.66
SLC6A1-201ENST00000287766 BARX1Q9HBU1 254 aaPredicted RBP10.92□□□□□ -0.66
SLC6A1-201ENST00000287766 A0A1W2PQM1 296 aa10.92□□□□□ -0.66
SLC6A1-201ENST00000287766 IGHEP01854 428 aa10.92□□□□□ -0.66
SLC6A1-201ENST00000287766 COMPP49747 757 aaPredicted RBP10.92□□□□□ -0.66
SLC6A1-201ENST00000287766 RAB7AP51149 207 aa10.92□□□□□ -0.66
SLC6A1-201ENST00000287766 TEX30Q5JUR7 227 aa10.92□□□□□ -0.66
SLC6A1-201ENST00000287766 HES3Q5TGS1 186 aa10.92□□□□□ -0.66
SLC6A1-201ENST00000287766 C16orf82Q7Z2V1 217 aa10.92□□□□□ -0.66
SLC6A1-201ENST00000287766 CHRDL1Q9BU40 450 aa10.92□□□□□ -0.66
SLC6A1-201ENST00000287766 KIAA1456Q9P272 454 aa10.92□□□□□ -0.66
SLC6A1-201ENST00000287766 WNT16Q9UBV4 365 aa10.92□□□□□ -0.66
SLC6A1-201ENST00000287766 ST8SIA5O15466 376 aa10.92□□□□□ -0.66
SLC6A1-201ENST00000287766 MRGPRGQ86SM5 289 aa10.92□□□□□ -0.66
SLC6A1-201ENST00000287766 SCCPDHQ8NBX0 429 aa10.92□□□□□ -0.66
SLC6A1-201ENST00000287766 OR1P1Q8NH06 330 aa10.92□□□□□ -0.66
SLC6A1-201ENST00000287766 SYNGR2O43760 224 aa10.91□□□□□ -0.66
SLC6A1-201ENST00000287766 CA6P23280 308 aa10.91□□□□□ -0.66
SLC6A1-201ENST00000287766 GNG10P50151 68 aa10.91□□□□□ -0.66
SLC6A1-201ENST00000287766 RPEL1Q2QD12 228 aa10.91□□□□□ -0.66
SLC6A1-201ENST00000287766 ANKRD55Q3KP44 614 aa10.91□□□□□ -0.66
SLC6A1-201ENST00000287766 BLNKQ8WV28 456 aa10.91□□□□□ -0.66
SLC6A1-201ENST00000287766 FOXJ2Q9P0K8 574 aa10.91□□□□□ -0.66
SLC6A1-201ENST00000287766 B3GAT1Q9P2W7 334 aa10.91□□□□□ -0.66
SLC6A1-201ENST00000287766 NEURL1O76050 574 aa10.91□□□□□ -0.66
SLC6A1-201ENST00000287766 MBPP02686 304 aaPredicted RBP10.91□□□□□ -0.66
SLC6A1-201ENST00000287766 VDAC1P21796 283 aa10.91□□□□□ -0.66
SLC6A1-201ENST00000287766 MZT1Q08AG7 82 aa10.91□□□□□ -0.66
SLC6A1-201ENST00000287766 OR8B8Q15620 311 aa10.91□□□□□ -0.66
SLC6A1-201ENST00000287766 KHDC3LQ587J8 217 aa10.91□□□□□ -0.66
SLC6A1-201ENST00000287766 Q5PR19 223 aa10.91□□□□□ -0.66
SLC6A1-201ENST00000287766 LEMD1Q68G75 181 aa10.91□□□□□ -0.66
SLC6A1-201ENST00000287766 DHRS13Q6UX07 377 aa10.91□□□□□ -0.66
SLC6A1-201ENST00000287766 OIT3Q8WWZ8 545 aa10.91□□□□□ -0.66
SLC6A1-201ENST00000287766 RAB24Q969Q5 203 aa10.91□□□□□ -0.66
SLC6A1-201ENST00000287766 S1PR3Q99500 378 aa10.91□□□□□ -0.66
SLC6A1-201ENST00000287766 PCED1AQ9H1Q7 454 aa10.91□□□□□ -0.66
SLC6A1-201ENST00000287766 ZNF665Q9H7R5 613 aa10.91□□□□□ -0.66
SLC6A1-201ENST00000287766 FANCMQ8IYD8 2048 aa10.91□□□□□ -0.66
SLC6A1-201ENST00000287766 INTS1Q8N201 2190 aaKnown RBP10.91□□□□□ -0.66
SLC6A1-201ENST00000287766 PDCD6O75340 191 aa10.91□□□□□ -0.66
SLC6A1-201ENST00000287766 GCGP01275 180 aa10.91□□□□□ -0.66
SLC6A1-201ENST00000287766 NDUFB7P17568 137 aa10.91□□□□□ -0.66
SLC6A1-201ENST00000287766 G6PCP35575 357 aa10.91□□□□□ -0.66
SLC6A1-201ENST00000287766 IL11RAQ14626 422 aa10.91□□□□□ -0.66
SLC6A1-201ENST00000287766 AQP3Q92482 292 aa10.91□□□□□ -0.66
SLC6A1-201ENST00000287766 ANAPC16Q96DE5 110 aa10.91□□□□□ -0.66
SLC6A1-201ENST00000287766 RARRES2Q99969 163 aa10.91□□□□□ -0.66
SLC6A1-201ENST00000287766 DCAF16Q9NXF7 216 aa10.91□□□□□ -0.66
SLC6A1-201ENST00000287766 POLDIP2Q9Y2S7 368 aa10.91□□□□□ -0.66
SLC6A1-201ENST00000287766 COX7A2P2O60397 106 aa10.9□□□□□ -0.66
SLC6A1-201ENST00000287766 CNIH1O95406 144 aa10.9□□□□□ -0.66
SLC6A1-201ENST00000287766 FBP1P09467 338 aa10.9□□□□□ -0.66
SLC6A1-201ENST00000287766 C19orf35Q6ZS72 473 aa10.9□□□□□ -0.66
SLC6A1-201ENST00000287766 CLDN23Q96B33 292 aa10.9□□□□□ -0.66
SLC6A1-201ENST00000287766 C5orf66Q9H5L9 145 aa10.9□□□□□ -0.66
SLC6A1-201ENST00000287766 HEXA-AS1Q9H8Q6 139 aa10.9□□□□□ -0.66
SLC6A1-201ENST00000287766 CTNNBIP1Q9NSA3 81 aaPredicted RBP10.9□□□□□ -0.66
SLC6A1-201ENST00000287766 CADP27708 2225 aa10.9□□□□□ -0.66
SLC6A1-201ENST00000287766 IGKV3D-11A0A0A0MRZ8 115 aa10.9□□□□□ -0.66
SLC6A1-201ENST00000287766 WISP1O95388 367 aa10.9□□□□□ -0.66
SLC6A1-201ENST00000287766 RPL13AP40429 203 aaKnown RBP10.9□□□□□ -0.66
SLC6A1-201ENST00000287766 TAS2R60P59551 318 aa10.9□□□□□ -0.66
SLC6A1-201ENST00000287766 RAC3P60763 192 aa10.9□□□□□ -0.66
SLC6A1-201ENST00000287766 LSM6P62312 80 aaKnown RBP10.9□□□□□ -0.66
SLC6A1-201ENST00000287766 SNAI3Q3KNW1 292 aa10.9□□□□□ -0.66
SLC6A1-201ENST00000287766 OR1L6Q8NGR2 347 aa10.9□□□□□ -0.66
SLC6A1-201ENST00000287766 KCNE4Q8WWG9 221 aa10.9□□□□□ -0.66
SLC6A1-201ENST00000287766 RTL8AQ9BWD3 113 aa10.9□□□□□ -0.66
SLC6A1-201ENST00000287766 KLRC4-KLRK1H3BQV0 150 aa10.9□□□□□ -0.66
SLC6A1-201ENST00000287766 ACTL6AO96019 429 aa10.9□□□□□ -0.66
SLC6A1-201ENST00000287766 CSN1S1P47710 185 aa10.9□□□□□ -0.66
SLC6A1-201ENST00000287766 SUB1P53999 127 aaKnown RBP eCLIP10.9□□□□□ -0.66
SLC6A1-201ENST00000287766 ZP4Q12836 540 aa10.9□□□□□ -0.66
SLC6A1-201ENST00000287766 TBC1D26Q86UD7 250 aa10.9□□□□□ -0.66
SLC6A1-201ENST00000287766 OR2Y1Q8NGV0 311 aa10.9□□□□□ -0.66
SLC6A1-201ENST00000287766 TMEM204Q9BSN7 226 aa10.9□□□□□ -0.66
SLC6A1-201ENST00000287766 RALYQ9UKM9 306 aaKnown RBP10.9□□□□□ -0.66
SLC6A1-201ENST00000287766 FRMPD3Q5JV73 1810 aa10.9□□□□□ -0.66
SLC6A1-201ENST00000287766 GAGE10A6NGK3 116 aa10.9□□□□□ -0.67
SLC6A1-201ENST00000287766 ZNF718Q3SXZ3 478 aa10.9□□□□□ -0.67
SLC6A1-201ENST00000287766 HOGA1Q86XE5 327 aa10.9□□□□□ -0.67
SLC6A1-201ENST00000287766 CARFQ8N187 725 aa10.9□□□□□ -0.67
SLC6A1-201ENST00000287766 ZNF488Q96MN9 340 aa10.9□□□□□ -0.67
SLC6A1-201ENST00000287766 RNF2Q99496 336 aa10.9□□□□□ -0.67
SLC6A1-201ENST00000287766 WDR61Q9GZS3 305 aaKnown RBP10.9□□□□□ -0.67
SLC6A1-201ENST00000287766 GPR132Q9UNW8 380 aa10.9□□□□□ -0.67
SLC6A1-201ENST00000287766 CACNA1HO95180 2353 aa10.9□□□□□ -0.67
SLC6A1-201ENST00000287766 MSGN1A6NI15 193 aa10.89□□□□□ -0.67
SLC6A1-201ENST00000287766 IGHV3-13P01766 116 aa10.89□□□□□ -0.67
SLC6A1-201ENST00000287766 IGHV3-7P01780 117 aa10.89□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 60.2 ms