RNA–Protein interactions for RNA: ENST00000276201.6

UPF3B-201, Transcript of UPF3B, regulator of nonsense mediated mRNA decay, humanhuman

TSL 1 (best) BASIC

Gene UPF3B, Length 2,378 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPF3B-201ENST00000276201 IL2RGP31785 369 aa8.84□□□□□ -0.99
UPF3B-201ENST00000276201 CD200P41217 278 aa8.84□□□□□ -0.99
UPF3B-201ENST00000276201 TDGF1P3P51864 188 aa8.84□□□□□ -0.99
UPF3B-201ENST00000276201 KRTAP27-1Q3LI81 207 aa8.84□□□□□ -0.99
UPF3B-201ENST00000276201 NMSQ5H8A3 153 aa8.84□□□□□ -0.99
UPF3B-201ENST00000276201 SELENOHQ8IZQ5 122 aaKnown RBP8.84□□□□□ -0.99
UPF3B-201ENST00000276201 ZFP62Q8NB50 900 aaPredicted RBP8.84□□□□□ -0.99
UPF3B-201ENST00000276201 Q8NFD4 153 aa8.84□□□□□ -0.99
UPF3B-201ENST00000276201 SPTSSAQ969W0 71 aa8.84□□□□□ -0.99
UPF3B-201ENST00000276201 NABP1Q96AH0 204 aa8.84□□□□□ -0.99
UPF3B-201ENST00000276201 PACRGQ96M98 296 aaPredicted RBP8.84□□□□□ -0.99
UPF3B-201ENST00000276201 TECTBQ96PL2 329 aa8.84□□□□□ -0.99
UPF3B-201ENST00000276201 NEU1Q99519 415 aa8.84□□□□□ -0.99
UPF3B-201ENST00000276201 SDF2L1Q9HCN8 221 aa8.84□□□□□ -0.99
UPF3B-201ENST00000276201 SH2D2AQ9NP31 389 aa8.84□□□□□ -0.99
UPF3B-201ENST00000276201 SVILO95425 2214 aa8.83□□□□□ -1
UPF3B-201ENST00000276201 BAHCC1Q9P281 2608 aa8.83□□□□□ -1
UPF3B-201ENST00000276201 C5orf63A6NC05 138 aa8.83□□□□□ -1
UPF3B-201ENST00000276201 G3V3Y1 287 aa8.83□□□□□ -1
UPF3B-201ENST00000276201 PDCD6O75340 191 aa8.83□□□□□ -1
UPF3B-201ENST00000276201 WISP2O76076 250 aa8.83□□□□□ -1
UPF3B-201ENST00000276201 CRYABP02511 175 aaKnown RBP8.83□□□□□ -1
UPF3B-201ENST00000276201 CCL3P10147 92 aa8.83□□□□□ -1
UPF3B-201ENST00000276201 KLK2P20151 261 aa8.83□□□□□ -1
UPF3B-201ENST00000276201 MEOX1P50221 254 aa8.83□□□□□ -1
UPF3B-201ENST00000276201 PDLIM4P50479 330 aa8.83□□□□□ -1
UPF3B-201ENST00000276201 RPL23AP62750 156 aaKnown RBP8.83□□□□□ -1
UPF3B-201ENST00000276201 VAMP2P63027 116 aa8.83□□□□□ -1
UPF3B-201ENST00000276201 RNFT1Q5M7Z0 435 aa8.83□□□□□ -1
UPF3B-201ENST00000276201 FADS6Q8N9I5 356 aa8.83□□□□□ -1
UPF3B-201ENST00000276201 OR2M3Q8NG83 312 aa8.83□□□□□ -1
UPF3B-201ENST00000276201 OR10G3Q8NGC4 313 aa8.83□□□□□ -1
UPF3B-201ENST00000276201 OR5L1Q8NGL2 311 aa8.83□□□□□ -1
UPF3B-201ENST00000276201 ZNF845Q96IR2 970 aaPredicted RBP8.83□□□□□ -1
UPF3B-201ENST00000276201 SGCZQ96LD1 299 aa8.83□□□□□ -1
UPF3B-201ENST00000276201 TP53RKQ96S44 253 aa8.83□□□□□ -1
UPF3B-201ENST00000276201 PSMG3Q9BT73 122 aaPredicted RBP8.83□□□□□ -1
UPF3B-201ENST00000276201 NDUFAF3Q9BU61 184 aa8.83□□□□□ -1
UPF3B-201ENST00000276201 ABHD14AQ9BUJ0 271 aa8.83□□□□□ -1
UPF3B-201ENST00000276201 GLRX2Q9NS18 164 aa8.83□□□□□ -1
UPF3B-201ENST00000276201 PPP1R14DQ9NXH3 145 aa8.83□□□□□ -1
UPF3B-201ENST00000276201 PINLYPA6NC86 204 aa8.83□□□□□ -1
UPF3B-201ENST00000276201 A8MWP6 167 aa8.83□□□□□ -1
UPF3B-201ENST00000276201 RNF224P0DH78 156 aa8.83□□□□□ -1
UPF3B-201ENST00000276201 AADACP22760 399 aa8.83□□□□□ -1
UPF3B-201ENST00000276201 CRYGSP22914 178 aa8.83□□□□□ -1
UPF3B-201ENST00000276201 GUCA1AP43080 201 aaPredicted RBP8.83□□□□□ -1
UPF3B-201ENST00000276201 DYNLT3P51808 116 aa8.83□□□□□ -1
UPF3B-201ENST00000276201 PHLDA2Q53GA4 152 aa8.83□□□□□ -1
UPF3B-201ENST00000276201 SLC25A26Q70HW3 274 aa8.83□□□□□ -1
UPF3B-201ENST00000276201 CMTM1Q8IZ96 169 aa8.83□□□□□ -1
UPF3B-201ENST00000276201 PLPPR1Q8TBJ4 325 aa8.83□□□□□ -1
UPF3B-201ENST00000276201 PIGTQ969N2 578 aa8.83□□□□□ -1
UPF3B-201ENST00000276201 RHOVQ96L33 236 aa8.83□□□□□ -1
UPF3B-201ENST00000276201 CALHM2Q9HA72 323 aa8.83□□□□□ -1
UPF3B-201ENST00000276201 CHCHD2Q9Y6H1 151 aaPredicted RBP8.83□□□□□ -1
UPF3B-201ENST00000276201 A0A087WZY1 265 aa8.82□□□□□ -1
UPF3B-201ENST00000276201 H3BML4 177 aa8.82□□□□□ -1
UPF3B-201ENST00000276201 M0R135 149 aa8.82□□□□□ -1
UPF3B-201ENST00000276201 VAMP5O95183 116 aa8.82□□□□□ -1
UPF3B-201ENST00000276201 PPYP01298 95 aa8.82□□□□□ -1
UPF3B-201ENST00000276201 RD3LP0DJH9 198 aa8.82□□□□□ -1
UPF3B-201ENST00000276201 BCL2P10415 239 aa8.82□□□□□ -1
UPF3B-201ENST00000276201 EDN3P14138 238 aa8.82□□□□□ -1
UPF3B-201ENST00000276201 FABP4P15090 132 aa8.82□□□□□ -1
UPF3B-201ENST00000276201 SSX2Q16385 188 aa8.82□□□□□ -1
UPF3B-201ENST00000276201 GFI1BQ5VTD9 330 aa8.82□□□□□ -1
UPF3B-201ENST00000276201 MRPL52Q86TS9 123 aaKnown RBP8.82□□□□□ -1
UPF3B-201ENST00000276201 ST6GALNAC3Q8NDV1 305 aa8.82□□□□□ -1
UPF3B-201ENST00000276201 OR2M7Q8NG81 312 aa8.82□□□□□ -1
UPF3B-201ENST00000276201 OR5C1Q8NGR4 320 aa8.82□□□□□ -1
UPF3B-201ENST00000276201 ZNF799Q96GE5 643 aa8.82□□□□□ -1
UPF3B-201ENST00000276201 ACY3Q96HD9 319 aa8.82□□□□□ -1
UPF3B-201ENST00000276201 MEGF10Q96KG7 1140 aa8.82□□□□□ -1
UPF3B-201ENST00000276201 ELL3Q9HB65 397 aaPredicted RBP8.82□□□□□ -1
UPF3B-201ENST00000276201 RYDENQ9NUL5 291 aaKnown RBP8.82□□□□□ -1
UPF3B-201ENST00000276201 VAX2Q9UIW0 290 aa8.82□□□□□ -1
UPF3B-201ENST00000276201 EML6Q6ZMW3 1958 aa8.82□□□□□ -1
UPF3B-201ENST00000276201 KLRC4-KLRK1H3BQV0 150 aa8.81□□□□□ -1
UPF3B-201ENST00000276201 VDAC1P21796 283 aa8.81□□□□□ -1
UPF3B-201ENST00000276201 RAB35Q15286 201 aa8.81□□□□□ -1
UPF3B-201ENST00000276201 TSPO2Q5TGU0 170 aa8.81□□□□□ -1
UPF3B-201ENST00000276201 OSR2Q8N2R0 312 aa8.81□□□□□ -1
UPF3B-201ENST00000276201 OR10A7Q8NGE5 316 aa8.81□□□□□ -1
UPF3B-201ENST00000276201 OR5D13Q8NGL4 314 aa8.81□□□□□ -1
UPF3B-201ENST00000276201 OR2V1Q8NHB1 315 aa8.81□□□□□ -1
UPF3B-201ENST00000276201 NPRL2Q8WTW4 380 aa8.81□□□□□ -1
UPF3B-201ENST00000276201 CA5BP1Q8WTZ4 195 aa8.81□□□□□ -1
UPF3B-201ENST00000276201 REEP6Q96HR9 211 aa8.81□□□□□ -1
UPF3B-201ENST00000276201 SSX3Q99909 188 aa8.81□□□□□ -1
UPF3B-201ENST00000276201 PROK2Q9HC23 129 aa8.81□□□□□ -1
UPF3B-201ENST00000276201 ESPL1Q14674 2120 aa8.81□□□□□ -1
UPF3B-201ENST00000276201 POLEQ07864 2286 aa8.81□□□□□ -1
UPF3B-201ENST00000276201 RELNP78509 3460 aa8.81□□□□□ -1
UPF3B-201ENST00000276201 P04436 131 aa8.81□□□□□ -1
UPF3B-201ENST00000276201 OPRM1P35372 400 aa8.81□□□□□ -1
UPF3B-201ENST00000276201 FXYD4P59646 89 aa8.81□□□□□ -1
UPF3B-201ENST00000276201 MALLQ13021 153 aa8.81□□□□□ -1
UPF3B-201ENST00000276201 PRDX4Q13162 271 aa8.81□□□□□ -1
UPF3B-201ENST00000276201 FIP1L1Q6UN15 594 aaKnown RBP8.81□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 41.3 ms