RNA–Protein interactions for RNA: ENST00000274030.10

USP53-201, Transcript of ubiquitin specific peptidase 53, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene USP53, Length 5,936 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP53-201ENST00000274030 RNFT1Q5M7Z0 435 aa9.96□□□□□ -0.82
USP53-201ENST00000274030 FAM27BQ5VT28 67 aa9.96□□□□□ -0.82
USP53-201ENST00000274030 WDR73Q6P4I2 378 aa9.96□□□□□ -0.82
USP53-201ENST00000274030 OR1L8Q8NGR8 309 aa9.96□□□□□ -0.82
USP53-201ENST00000274030 OR2V2Q96R30 315 aa9.96□□□□□ -0.82
USP53-201ENST00000274030 ZFC3H1O60293 1989 aaKnown RBP9.96□□□□□ -0.82
USP53-201ENST00000274030 IGHV1-45A0A0A0MS14 117 aa9.95□□□□□ -0.82
USP53-201ENST00000274030 EPOPA6NHQ4 379 aa9.95□□□□□ -0.82
USP53-201ENST00000274030 DXOO77932 396 aaKnown RBP9.95□□□□□ -0.82
USP53-201ENST00000274030 FTH1P19P0C7X4 201 aa9.95□□□□□ -0.82
USP53-201ENST00000274030 SLC35B1P78383 322 aa9.95□□□□□ -0.82
USP53-201ENST00000274030 HLA-DRB5Q30154 266 aa9.95□□□□□ -0.82
USP53-201ENST00000274030 TEPPQ6URK8 271 aa9.95□□□□□ -0.82
USP53-201ENST00000274030 RBPMS2Q6ZRY4 209 aaKnown RBP9.95□□□□□ -0.82
USP53-201ENST00000274030 H3BQ15 152 aa9.95□□□□□ -0.82
USP53-201ENST00000274030 SCTP09683 121 aa9.95□□□□□ -0.82
USP53-201ENST00000274030 IFITM3Q01628 133 aa9.95□□□□□ -0.82
USP53-201ENST00000274030 GGTLC2Q14390 218 aa9.95□□□□□ -0.82
USP53-201ENST00000274030 DCAF12L2Q5VW00 463 aa9.95□□□□□ -0.82
USP53-201ENST00000274030 HSD17B13Q7Z5P4 300 aaPredicted RBP9.95□□□□□ -0.82
USP53-201ENST00000274030 TMEM171Q8WVE6 324 aa9.95□□□□□ -0.82
USP53-201ENST00000274030 TRAF4Q9BUZ4 470 aaPredicted RBP9.95□□□□□ -0.82
USP53-201ENST00000274030 TEX30Q5JUR7 227 aa9.95□□□□□ -0.82
USP53-201ENST00000274030 DHRS11Q6UWP2 260 aa9.95□□□□□ -0.82
USP53-201ENST00000274030 PILRAQ9UKJ1 303 aa9.95□□□□□ -0.82
USP53-201ENST00000274030 ARAP2Q8WZ64 1704 aa9.95□□□□□ -0.82
USP53-201ENST00000274030 C17orf51A8MQB3 221 aa9.95□□□□□ -0.82
USP53-201ENST00000274030 CDS2O95674 445 aa9.95□□□□□ -0.82
USP53-201ENST00000274030 PLAUP00749 431 aa9.95□□□□□ -0.82
USP53-201ENST00000274030 GPR6P46095 362 aaPredicted RBP9.95□□□□□ -0.82
USP53-201ENST00000274030 ZFP36L2P47974 494 aaKnown RBP9.95□□□□□ -0.82
USP53-201ENST00000274030 OR1L1Q8NH94 360 aa9.95□□□□□ -0.82
USP53-201ENST00000274030 FAM216AQ8WUB2 273 aa9.95□□□□□ -0.82
USP53-201ENST00000274030 POM121Q96HA1 1249 aa9.95□□□□□ -0.82
USP53-201ENST00000274030 P2RX4Q99571 388 aa9.95□□□□□ -0.82
USP53-201ENST00000274030 POLR2AP24928 1970 aaKnown RBP9.95□□□□□ -0.82
USP53-201ENST00000274030 C4orf51C9J302 202 aa9.95□□□□□ -0.82
USP53-201ENST00000274030 EIF3GO75821 320 aaKnown RBP eCLIP9.95□□□□□ -0.82
USP53-201ENST00000274030 PRF1P14222 555 aa9.95□□□□□ -0.82
USP53-201ENST00000274030 CHCHD2P9Q5T1J5 151 aaPredicted RBP9.95□□□□□ -0.82
USP53-201ENST00000274030 Q6ZN92 141 aa9.95□□□□□ -0.82
USP53-201ENST00000274030 GSX1Q9H4S2 264 aaPredicted RBP9.95□□□□□ -0.82
USP53-201ENST00000274030 A0A1B0GU03 582 aa9.94□□□□□ -0.82
USP53-201ENST00000274030 TMEM210A6NLX4 147 aa9.94□□□□□ -0.82
USP53-201ENST00000274030 AP4M1O00189 453 aa9.94□□□□□ -0.82
USP53-201ENST00000274030 TSPAN2O60636 221 aa9.94□□□□□ -0.82
USP53-201ENST00000274030 PNRC1Q12796 327 aaPredicted RBP9.94□□□□□ -0.82
USP53-201ENST00000274030 FAM214BQ7L5A3 538 aa9.94□□□□□ -0.82
USP53-201ENST00000274030 ASCL5Q7RTU5 278 aa9.94□□□□□ -0.82
USP53-201ENST00000274030 CCDC88CQ9P219 2028 aa9.94□□□□□ -0.82
USP53-201ENST00000274030 SIGLEC5O15389 551 aa9.94□□□□□ -0.82
USP53-201ENST00000274030 VSIG10L2P0DP72 767 aa9.94□□□□□ -0.82
USP53-201ENST00000274030 HCP5Q6MZN7 132 aa9.94□□□□□ -0.82
USP53-201ENST00000274030 DPPA3Q6W0C5 159 aa9.94□□□□□ -0.82
USP53-201ENST00000274030 SCGB1D4Q6XE38 83 aa9.94□□□□□ -0.82
USP53-201ENST00000274030 MUC15Q8N387 334 aa9.94□□□□□ -0.82
USP53-201ENST00000274030 MRPL30Q8TCC3 161 aaKnown RBP9.94□□□□□ -0.82
USP53-201ENST00000274030 ITLN1Q8WWA0 313 aa9.94□□□□□ -0.82
USP53-201ENST00000274030 PERPQ96FX8 193 aa9.94□□□□□ -0.82
USP53-201ENST00000274030 KCNMB2Q9Y691 235 aa9.94□□□□□ -0.82
USP53-201ENST00000274030 CACNA1EQ15878 2313 aa9.94□□□□□ -0.82
USP53-201ENST00000274030 HBZP02008 142 aa9.94□□□□□ -0.82
USP53-201ENST00000274030 CD1BP29016 333 aa9.94□□□□□ -0.82
USP53-201ENST00000274030 C1orf185Q5T7R7 199 aa9.94□□□□□ -0.82
USP53-201ENST00000274030 FGF11Q92914 225 aa9.94□□□□□ -0.82
USP53-201ENST00000274030 STARD4Q96DR4 205 aa9.94□□□□□ -0.82
USP53-201ENST00000274030 IGSF23A1L1A6 192 aa9.94□□□□□ -0.82
USP53-201ENST00000274030 SNURFLB1AK76 121 aa9.94□□□□□ -0.82
USP53-201ENST00000274030 PRNTQ86SH4 94 aa9.94□□□□□ -0.82
USP53-201ENST00000274030 MRPL37Q9BZE1 423 aaKnown RBP9.94□□□□□ -0.82
USP53-201ENST00000274030 ZNF831Q5JPB2 1677 aa9.94□□□□□ -0.82
USP53-201ENST00000274030 GCM2O75603 506 aaPredicted RBP9.94□□□□□ -0.82
USP53-201ENST00000274030 OVCH2Q7RTZ1 564 aa9.94□□□□□ -0.82
USP53-201ENST00000274030 DYNLRB2Q8TF09 96 aa9.94□□□□□ -0.82
USP53-201ENST00000274030 RSG1Q9BU20 258 aa9.94□□□□□ -0.82
USP53-201ENST00000274030 IFT22Q9H7X7 185 aa9.94□□□□□ -0.82
USP53-201ENST00000274030 PRDM6Q9NQX0 595 aa9.94□□□□□ -0.82
USP53-201ENST00000274030 CGB1A6NKQ9 187 aa9.93□□□□□ -0.82
USP53-201ENST00000274030 ZIC3O60481 467 aa9.93□□□□□ -0.82
USP53-201ENST00000274030 PPOXP50336 477 aa9.93□□□□□ -0.82
USP53-201ENST00000274030 CEACAM21Q3KPI0 293 aa9.93□□□□□ -0.82
USP53-201ENST00000274030 CDCP2Q5VXM1 449 aa9.93□□□□□ -0.82
USP53-201ENST00000274030 OR8A1Q8NGG7 326 aa9.93□□□□□ -0.82
USP53-201ENST00000274030 AP5S1Q9NUS5 200 aa9.93□□□□□ -0.82
USP53-201ENST00000274030 OR5AC2Q9NZP5 309 aa9.93□□□□□ -0.82
USP53-201ENST00000274030 AUP1Q9Y679 476 aa9.93□□□□□ -0.82
USP53-201ENST00000274030 B4E171 279 aa9.93□□□□□ -0.82
USP53-201ENST00000274030 MMP9P14780 707 aa9.93□□□□□ -0.82
USP53-201ENST00000274030 TSPAN7P41732 249 aa9.93□□□□□ -0.82
USP53-201ENST00000274030 PARP11Q9NR21 331 aa9.93□□□□□ -0.82
USP53-201ENST00000274030 DOPEY2Q9Y3R5 2298 aa9.93□□□□□ -0.82
USP53-201ENST00000274030 K7N7A8 449 aa9.93□□□□□ -0.82
USP53-201ENST00000274030 RAB29O14966 203 aa9.93□□□□□ -0.82
USP53-201ENST00000274030 C1QL1O75973 258 aa9.93□□□□□ -0.82
USP53-201ENST00000274030 PGA4P0DJD7 388 aa9.93□□□□□ -0.82
USP53-201ENST00000274030 PSMB2P49721 201 aa9.93□□□□□ -0.82
USP53-201ENST00000274030 KCNMB1Q16558 191 aa9.93□□□□□ -0.82
USP53-201ENST00000274030 LOC389332A0A1B0GUA5 103 aa9.93□□□□□ -0.82
USP53-201ENST00000274030 CA11O75493 328 aa9.93□□□□□ -0.82
USP53-201ENST00000274030 OR2H2O95918 312 aa9.93□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 33.3 ms