RNA–Protein interactions for RNA: ENST00000269397.8

CBX4-201, Transcript of chromobox 4, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene CBX4, Length 2,664 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBX4-201ENST00000269397 IL22RA2Q969J5 263 aa23.4■■□□□ 1.34
CBX4-201ENST00000269397 ADGRG7Q96K78 797 aa23.4■■□□□ 1.34
CBX4-201ENST00000269397 RAB40CQ96S21 281 aa23.4■■□□□ 1.34
CBX4-201ENST00000269397 HIPK2Q9H2X6 1198 aa23.4■■□□□ 1.34
CBX4-201ENST00000269397 ZNF503-AS2A6NEH8 195 aa23.4■■□□□ 1.34
CBX4-201ENST00000269397 PHOX2AO14813 284 aa23.4■■□□□ 1.34
CBX4-201ENST00000269397 HLA-BQ31612 363 aa23.4■■□□□ 1.34
CBX4-201ENST00000269397 CEACAM21Q3KPI0 293 aa23.4■■□□□ 1.34
CBX4-201ENST00000269397 COLCA1Q6ZS62 124 aa23.4■■□□□ 1.34
CBX4-201ENST00000269397 KCNE4Q8WWG9 221 aa23.4■■□□□ 1.34
CBX4-201ENST00000269397 PSMF1Q92530 271 aa23.4■■□□□ 1.34
CBX4-201ENST00000269397 C9J4A7 227 aa23.39■■□□□ 1.34
CBX4-201ENST00000269397 SYNGR2O43760 224 aa23.39■■□□□ 1.34
CBX4-201ENST00000269397 LILRA1O75019 489 aa23.39■■□□□ 1.34
CBX4-201ENST00000269397 PNRC1Q12796 327 aaPredicted RBP23.39■■□□□ 1.34
CBX4-201ENST00000269397 ADIRFQ15847 76 aa23.39■■□□□ 1.34
CBX4-201ENST00000269397 LILRB2Q8N423 598 aa23.39■■□□□ 1.34
CBX4-201ENST00000269397 DEPPQ9NTK1 212 aa23.39■■□□□ 1.34
CBX4-201ENST00000269397 UFSP2Q9NUQ7 469 aa23.39■■□□□ 1.34
CBX4-201ENST00000269397 ESPL1Q14674 2120 aa23.39■■□□□ 1.33
CBX4-201ENST00000269397 LRRC3CA6NJW4 275 aa23.39■■□□□ 1.33
CBX4-201ENST00000269397 CTXN2P0C2S0 81 aa23.39■■□□□ 1.33
CBX4-201ENST00000269397 TUBG1P23258 451 aa23.39■■□□□ 1.33
CBX4-201ENST00000269397 PRDM6Q9NQX0 595 aa23.39■■□□□ 1.33
CBX4-201ENST00000269397 MDH2P40926 338 aaKnown RBP23.38■■□□□ 1.33
CBX4-201ENST00000269397 SRSF7Q16629 238 aaKnown RBP eCLIP23.38■■□□□ 1.33
CBX4-201ENST00000269397 SPANXN5Q5MJ07 72 aa23.38■■□□□ 1.33
CBX4-201ENST00000269397 SPEM1Q8N4L4 309 aa23.38■■□□□ 1.33
CBX4-201ENST00000269397 IFI44Q8TCB0 444 aa23.38■■□□□ 1.33
CBX4-201ENST00000269397 GDF1P27539 372 aa23.38■■□□□ 1.33
CBX4-201ENST00000269397 S100GP29377 79 aa23.38■■□□□ 1.33
CBX4-201ENST00000269397 DDTP30046 118 aa23.38■■□□□ 1.33
CBX4-201ENST00000269397 IL2RGP31785 369 aa23.38■■□□□ 1.33
CBX4-201ENST00000269397 SSX9Q7RTT3 188 aa23.38■■□□□ 1.33
CBX4-201ENST00000269397 TRAV24A0A0B4J272 114 aa23.37■■□□□ 1.33
CBX4-201ENST00000269397 PINLYPA6NC86 204 aa23.37■■□□□ 1.33
CBX4-201ENST00000269397 CD300LBA8K4G0 201 aa23.37■■□□□ 1.33
CBX4-201ENST00000269397 COL19A1Q14993 1142 aa23.37■■□□□ 1.33
CBX4-201ENST00000269397 OR2Y1Q8NGV0 311 aa23.37■■□□□ 1.33
CBX4-201ENST00000269397 OR4X1Q8NH49 305 aa23.37■■□□□ 1.33
CBX4-201ENST00000269397 GAB2Q9UQC2 676 aa23.37■■□□□ 1.33
CBX4-201ENST00000269397 A0A087X0M5 115 aa23.37■■□□□ 1.33
CBX4-201ENST00000269397 A0A1B0GX30 115 aa23.37■■□□□ 1.33
CBX4-201ENST00000269397 SMCO3A2RU48 225 aa23.37■■□□□ 1.33
CBX4-201ENST00000269397 MAP1LC3B2A6NCE7 125 aa23.37■■□□□ 1.33
CBX4-201ENST00000269397 MRPL33O75394 65 aaKnown RBP23.37■■□□□ 1.33
CBX4-201ENST00000269397 IGKV1-5P01602 117 aa23.37■■□□□ 1.33
CBX4-201ENST00000269397 RNPS1Q15287 305 aaKnown RBP23.37■■□□□ 1.33
CBX4-201ENST00000269397 MAP1LC3BQ9GZQ8 125 aa23.37■■□□□ 1.33
CBX4-201ENST00000269397 TMEM242Q9NWH2 141 aa23.37■■□□□ 1.33
CBX4-201ENST00000269397 WDFY4Q6ZS81 3184 aa23.37■■□□□ 1.33
CBX4-201ENST00000269397 IL11RAQ14626 422 aa23.36■■□□□ 1.33
CBX4-201ENST00000269397 MBD3L1Q8WWY6 194 aa23.36■■□□□ 1.33
CBX4-201ENST00000269397 A0A1W2PR80 420 aa23.36■■□□□ 1.33
CBX4-201ENST00000269397 OTX2P32243 289 aa23.36■■□□□ 1.33
CBX4-201ENST00000269397 OR4C12Q96R67 309 aa23.36■■□□□ 1.33
CBX4-201ENST00000269397 SMIM7Q9BQ49 75 aa23.36■■□□□ 1.33
CBX4-201ENST00000269397 VAX2Q9UIW0 290 aa23.36■■□□□ 1.33
CBX4-201ENST00000269397 RBM7Q9Y580 266 aaKnown RBP23.36■■□□□ 1.33
CBX4-201ENST00000269397 Q0VFX4 171 aa23.36■■□□□ 1.33
CBX4-201ENST00000269397 SGCZQ96LD1 299 aa23.36■■□□□ 1.33
CBX4-201ENST00000269397 UBE2L5PA0A1B0GUS4 154 aa23.35■■□□□ 1.33
CBX4-201ENST00000269397 IGLV2-14P01704 120 aa23.35■■□□□ 1.33
CBX4-201ENST00000269397 PKIAP61925 76 aa23.35■■□□□ 1.33
CBX4-201ENST00000269397 OR8G2PQ6IF36 304 aa23.35■■□□□ 1.33
CBX4-201ENST00000269397 RPUSD4Q96CM3 377 aaKnown RBP23.35■■□□□ 1.33
CBX4-201ENST00000269397 KCNS2Q9ULS6 477 aa23.35■■□□□ 1.33
CBX4-201ENST00000269397 URB1O60287 2271 aaKnown RBP23.35■■□□□ 1.33
CBX4-201ENST00000269397 TRBV24-1A0A075B6N3 115 aa23.35■■□□□ 1.33
CBX4-201ENST00000269397 K7ESF4 209 aa23.35■■□□□ 1.33
CBX4-201ENST00000269397 ZNF737O75373 536 aa23.35■■□□□ 1.33
CBX4-201ENST00000269397 OPN1MWP04001 364 aa23.35■■□□□ 1.33
CBX4-201ENST00000269397 OPN1MW2P0DN77 364 aa23.35■■□□□ 1.33
CBX4-201ENST00000269397 OPN1MW3P0DN78 364 aa23.35■■□□□ 1.33
CBX4-201ENST00000269397 C16orf82Q7Z2V1 217 aa23.35■■□□□ 1.33
CBX4-201ENST00000269397 CYTIPO60759 359 aa23.34■■□□□ 1.33
CBX4-201ENST00000269397 CYC1P08574 325 aa23.34■■□□□ 1.33
CBX4-201ENST00000269397 ERVS71-1P61550 626 aa23.34■■□□□ 1.33
CBX4-201ENST00000269397 LRRC75BQ2VPJ9 315 aa23.34■■□□□ 1.33
CBX4-201ENST00000269397 SAXO1Q8IYX7 474 aa23.34■■□□□ 1.33
CBX4-201ENST00000269397 OR10A7Q8NGE5 316 aa23.34■■□□□ 1.33
CBX4-201ENST00000269397 OR10V1Q8NGI7 309 aa23.34■■□□□ 1.33
CBX4-201ENST00000269397 HIST1H2AAQ96QV6 131 aa23.34■■□□□ 1.33
CBX4-201ENST00000269397 TSTD3H0UI37 97 aa23.34■■□□□ 1.33
CBX4-201ENST00000269397 RHBDL1O75783 438 aa23.34■■□□□ 1.33
CBX4-201ENST00000269397 IGKV1D-33P01593 117 aa23.34■■□□□ 1.33
CBX4-201ENST00000269397 IGKV1-33P01594 117 aa23.34■■□□□ 1.33
CBX4-201ENST00000269397 FOLR3P41439 243 aa23.34■■□□□ 1.33
CBX4-201ENST00000269397 COL10A1Q03692 680 aa23.34■■□□□ 1.33
CBX4-201ENST00000269397 DOCK11Q5JSL3 2073 aa23.34■■□□□ 1.33
CBX4-201ENST00000269397 WDR1O75083 606 aa23.33■■□□□ 1.33
CBX4-201ENST00000269397 CXCL12P48061 93 aa23.33■■□□□ 1.33
CBX4-201ENST00000269397 RTP5Q14D33 572 aa23.33■■□□□ 1.33
CBX4-201ENST00000269397 TESK1Q15569 626 aa23.33■■□□□ 1.33
CBX4-201ENST00000269397 MRGPRGQ86SM5 289 aa23.33■■□□□ 1.33
CBX4-201ENST00000269397 LHX4Q969G2 390 aa23.33■■□□□ 1.33
CBX4-201ENST00000269397 CDH20Q9HBT6 801 aa23.33■■□□□ 1.33
CBX4-201ENST00000269397 PITPNC1Q9UKF7 332 aa23.33■■□□□ 1.33
CBX4-201ENST00000269397 LAMP3Q9UQV4 416 aa23.33■■□□□ 1.33
CBX4-201ENST00000269397 DNAJC13O75165 2243 aa23.33■■□□□ 1.32
Retrieved 100 of 20,778 RNA–protein pairs in 31.6 ms