RNA–Protein interactions for RNA: ENST00000263187.3

MSH4-201, Transcript of mutS homolog 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene MSH4, Length 3,266 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH4-201ENST00000263187 KRASP01116 189 aa7.76□□□□□ -1.17
MSH4-201ENST00000263187 IGKV1-39P01597 117 aa7.76□□□□□ -1.17
MSH4-201ENST00000263187 IGKV1D-39P04432 117 aa7.76□□□□□ -1.17
MSH4-201ENST00000263187 FABP4P15090 132 aa7.76□□□□□ -1.17
MSH4-201ENST00000263187 S100PP25815 95 aa7.76□□□□□ -1.17
MSH4-201ENST00000263187 WNT5AP41221 380 aa7.76□□□□□ -1.17
MSH4-201ENST00000263187 GFRA1P56159 465 aa7.76□□□□□ -1.17
MSH4-201ENST00000263187 ZNF816Q0VGE8 651 aaPredicted RBP7.76□□□□□ -1.17
MSH4-201ENST00000263187 EIF3IQ13347 325 aaKnown RBP7.76□□□□□ -1.17
MSH4-201ENST00000263187 ZNF787Q6DD87 383 aa7.76□□□□□ -1.17
MSH4-201ENST00000263187 ZNF383Q8NA42 475 aa7.76□□□□□ -1.17
MSH4-201ENST00000263187 LFNGQ8NES3 379 aa7.76□□□□□ -1.17
MSH4-201ENST00000263187 GATAD1Q8WUU5 269 aa7.76□□□□□ -1.17
MSH4-201ENST00000263187 TVP23CQ96ET8 276 aa7.76□□□□□ -1.17
MSH4-201ENST00000263187 PFDN5Q99471 154 aa7.76□□□□□ -1.17
MSH4-201ENST00000263187 PSENENQ9NZ42 101 aa7.76□□□□□ -1.17
MSH4-201ENST00000263187 IL36GQ9NZH8 169 aa7.76□□□□□ -1.17
MSH4-201ENST00000263187 RNF115Q9Y4L5 304 aa7.76□□□□□ -1.17
MSH4-201ENST00000263187 KIAA1549Q9HCM3 1950 aa7.76□□□□□ -1.17
MSH4-201ENST00000263187 CDIPTO14735 213 aa7.76□□□□□ -1.17
MSH4-201ENST00000263187 HIST1H2BKO60814 126 aa7.76□□□□□ -1.17
MSH4-201ENST00000263187 HIST1H2BJP06899 126 aa7.76□□□□□ -1.17
MSH4-201ENST00000263187 SOD3P08294 240 aa7.76□□□□□ -1.17
MSH4-201ENST00000263187 HIST1H2BOP23527 126 aa7.76□□□□□ -1.17
MSH4-201ENST00000263187 UCP1P25874 307 aa7.76□□□□□ -1.17
MSH4-201ENST00000263187 S100A2P29034 98 aa7.76□□□□□ -1.17
MSH4-201ENST00000263187 HIST1H2BBP33778 126 aa7.76□□□□□ -1.17
MSH4-201ENST00000263187 HIST1H2BDP58876 126 aa7.76□□□□□ -1.17
MSH4-201ENST00000263187 HIST1H2BCP62807 126 aa7.76□□□□□ -1.17
MSH4-201ENST00000263187 SRPXP78539 464 aa7.76□□□□□ -1.17
MSH4-201ENST00000263187 TLE4Q04727 773 aa7.76□□□□□ -1.17
MSH4-201ENST00000263187 ZFP36L1Q07352 338 aaKnown RBP7.76□□□□□ -1.17
MSH4-201ENST00000263187 HIST2H2BEQ16778 126 aa7.76□□□□□ -1.17
MSH4-201ENST00000263187 HIST2H2BFQ5QNW6 126 aaPredicted RBP7.76□□□□□ -1.17
MSH4-201ENST00000263187 BTNL3Q6UXE8 466 aa7.76□□□□□ -1.17
MSH4-201ENST00000263187 MCEMP1Q8IX19 187 aa7.76□□□□□ -1.17
MSH4-201ENST00000263187 GCNT2Q8N0V5 402 aa7.76□□□□□ -1.17
MSH4-201ENST00000263187 FAM58AQ8N1B3 248 aa7.76□□□□□ -1.17
MSH4-201ENST00000263187 HIST1H2BHQ93079 126 aa7.76□□□□□ -1.17
MSH4-201ENST00000263187 APH1AQ96BI3 265 aa7.76□□□□□ -1.17
MSH4-201ENST00000263187 RPUSD4Q96CM3 377 aaKnown RBP7.76□□□□□ -1.17
MSH4-201ENST00000263187 SNX22Q96L94 193 aa7.76□□□□□ -1.17
MSH4-201ENST00000263187 HIST1H2BNQ99877 126 aa7.76□□□□□ -1.17
MSH4-201ENST00000263187 HIST1H2BMQ99879 126 aa7.76□□□□□ -1.17
MSH4-201ENST00000263187 DLL3Q9NYJ7 618 aa7.76□□□□□ -1.17
MSH4-201ENST00000263187 KIAA1456Q9P272 454 aa7.76□□□□□ -1.17
MSH4-201ENST00000263187 OR2W1Q9Y3N9 320 aa7.76□□□□□ -1.17
MSH4-201ENST00000263187 KIR2DS1A0A191URI9 304 aa7.75□□□□□ -1.17
MSH4-201ENST00000263187 ANKRD30BLA7E2S9 258 aa7.75□□□□□ -1.17
MSH4-201ENST00000263187 SYNGR4O95473 234 aa7.75□□□□□ -1.17
MSH4-201ENST00000263187 MT-CO3P00414 261 aa7.75□□□□□ -1.17
MSH4-201ENST00000263187 COL8A2P25067 703 aa7.75□□□□□ -1.17
MSH4-201ENST00000263187 CEACAM6P40199 344 aa7.75□□□□□ -1.17
MSH4-201ENST00000263187 KIR2DS4P43632 304 aa7.75□□□□□ -1.17
MSH4-201ENST00000263187 PMP22Q01453 160 aa7.75□□□□□ -1.17
MSH4-201ENST00000263187 KIR2DS1Q14954 304 aa7.75□□□□□ -1.17
MSH4-201ENST00000263187 ZNF726P1Q15940 193 aa7.75□□□□□ -1.17
MSH4-201ENST00000263187 ZNF610Q8N9Z0 462 aa7.75□□□□□ -1.17
MSH4-201ENST00000263187 OR2M7Q8NG81 312 aa7.75□□□□□ -1.17
MSH4-201ENST00000263187 TUBA4BQ9H853 241 aa7.75□□□□□ -1.17
MSH4-201ENST00000263187 DEFB108AA8MXU0 73 aa7.75□□□□□ -1.17
MSH4-201ENST00000263187 RAMP3O60896 148 aa7.75□□□□□ -1.17
MSH4-201ENST00000263187 NEURL1O76050 574 aa7.75□□□□□ -1.17
MSH4-201ENST00000263187 CLDN1O95832 211 aa7.75□□□□□ -1.17
MSH4-201ENST00000263187 IGKV1-5P01602 117 aa7.75□□□□□ -1.17
MSH4-201ENST00000263187 PGA5P0DJD9 388 aa7.75□□□□□ -1.17
MSH4-201ENST00000263187 LMO1P25800 156 aa7.75□□□□□ -1.17
MSH4-201ENST00000263187 TAS2R30P59541 319 aa7.75□□□□□ -1.17
MSH4-201ENST00000263187 PLP2Q04941 152 aa7.75□□□□□ -1.17
MSH4-201ENST00000263187 RTP5Q14D33 572 aa7.75□□□□□ -1.17
MSH4-201ENST00000263187 ADIRFQ15847 76 aa7.75□□□□□ -1.17
MSH4-201ENST00000263187 KRTAP27-1Q3LI81 207 aa7.75□□□□□ -1.17
MSH4-201ENST00000263187 RIPPLY2Q5TAB7 128 aa7.75□□□□□ -1.17
MSH4-201ENST00000263187 ABHD17BQ5VST6 288 aa7.75□□□□□ -1.17
MSH4-201ENST00000263187 C6orf15Q6UXA7 325 aaPredicted RBP7.75□□□□□ -1.17
MSH4-201ENST00000263187 ZNF826PQ6ZT77 177 aa7.75□□□□□ -1.17
MSH4-201ENST00000263187 CCDC54Q8NEL0 328 aa7.75□□□□□ -1.17
MSH4-201ENST00000263187 RFESDQ8TAC1 157 aa7.75□□□□□ -1.17
MSH4-201ENST00000263187 FRZBQ92765 325 aa7.75□□□□□ -1.17
MSH4-201ENST00000263187 APOBEC3DQ96AK3 386 aaPredicted RBP7.75□□□□□ -1.17
MSH4-201ENST00000263187 PRDM14Q9GZV8 571 aa7.75□□□□□ -1.17
MSH4-201ENST00000263187 OR51M1Q9H341 326 aa7.75□□□□□ -1.17
MSH4-201ENST00000263187 PLSCR2Q9NRY7 297 aa7.75□□□□□ -1.17
MSH4-201ENST00000263187 FOXJ2Q9P0K8 574 aa7.75□□□□□ -1.17
MSH4-201ENST00000263187 IGHV3-43A0A0B4J1X8 118 aa7.74□□□□□ -1.17
MSH4-201ENST00000263187 NTN3O00634 580 aaPredicted RBP7.74□□□□□ -1.17
MSH4-201ENST00000263187 GALR2O43603 387 aaPredicted RBP7.74□□□□□ -1.17
MSH4-201ENST00000263187 IGHV3-43DP0DP04 118 aa7.74□□□□□ -1.17
MSH4-201ENST00000263187 LHX2P50458 406 aa7.74□□□□□ -1.17
MSH4-201ENST00000263187 HLA-DRB3P79483 266 aa7.74□□□□□ -1.17
MSH4-201ENST00000263187 OR1C1Q15619 314 aa7.74□□□□□ -1.17
MSH4-201ENST00000263187 ZNF324BQ6AW86 544 aaPredicted RBP7.74□□□□□ -1.17
MSH4-201ENST00000263187 TMPRSS7Q7RTY8 843 aa7.74□□□□□ -1.17
MSH4-201ENST00000263187 HAPLN4Q86UW8 402 aa7.74□□□□□ -1.17
MSH4-201ENST00000263187 OR10V1Q8NGI7 309 aa7.74□□□□□ -1.17
MSH4-201ENST00000263187 S100PBPQ96BU1 408 aa7.74□□□□□ -1.17
MSH4-201ENST00000263187 GNPNAT1Q96EK6 184 aaPredicted RBP7.74□□□□□ -1.17
MSH4-201ENST00000263187 RBKSQ9H477 322 aa7.74□□□□□ -1.17
MSH4-201ENST00000263187 SLC25A22Q9H936 323 aa7.74□□□□□ -1.17
MSH4-201ENST00000263187 CXorf65A6NEN9 183 aa7.74□□□□□ -1.17
Retrieved 100 of 20,778 RNA–protein pairs in 36.8 ms