RNA–Protein interactions for RNA: ENST00000262570.9

CHCHD3-201, Transcript of coiled-coil-helix-coiled-coil-helix domain containing 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CHCHD3, Length 1,598 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHCHD3-201ENST00000262570 RUSC1-AS1Q66K80 236 aa13.54□□□□□ -0.24
CHCHD3-201ENST00000262570 ZNF626Q68DY1 528 aa13.54□□□□□ -0.24
CHCHD3-201ENST00000262570 PYHIN1Q6K0P9 492 aa13.54□□□□□ -0.24
CHCHD3-201ENST00000262570 FAM53AQ6NSI3 398 aaPredicted RBP13.54□□□□□ -0.24
CHCHD3-201ENST00000262570 BRD3OSQ6XYD6 125 aa13.54□□□□□ -0.24
CHCHD3-201ENST00000262570 CCDC190Q86UF4 302 aa13.54□□□□□ -0.24
CHCHD3-201ENST00000262570 PIP4P2Q8N4L2 257 aa13.54□□□□□ -0.24
CHCHD3-201ENST00000262570 OR52L2PQ8NGH6 319 aa13.54□□□□□ -0.24
CHCHD3-201ENST00000262570 GNG12Q9UBI6 72 aa13.54□□□□□ -0.24
CHCHD3-201ENST00000262570 ZNF69Q9UC07 566 aa13.54□□□□□ -0.24
CHCHD3-201ENST00000262570 JPT1Q9UK76 154 aa13.54□□□□□ -0.24
CHCHD3-201ENST00000262570 PSG11Q9UQ72 335 aa13.54□□□□□ -0.24
CHCHD3-201ENST00000262570 NIPBLQ6KC79 2804 aaeCLIP13.53□□□□□ -0.246e-6■■■□□ 17.7
CHCHD3-201ENST00000262570 ZFHX3Q15911 3703 aa13.53□□□□□ -0.24
CHCHD3-201ENST00000262570 A0A1W2PRD5 423 aa13.53□□□□□ -0.24
CHCHD3-201ENST00000262570 A0A1W2PRF3 423 aa13.53□□□□□ -0.24
CHCHD3-201ENST00000262570 A0A1W2PRM7 423 aa13.53□□□□□ -0.24
CHCHD3-201ENST00000262570 IGLV1-47P01700 117 aa13.53□□□□□ -0.24
CHCHD3-201ENST00000262570 HERPUD1Q15011 391 aa13.53□□□□□ -0.24
CHCHD3-201ENST00000262570 Q3ZCU0 254 aa13.53□□□□□ -0.24
CHCHD3-201ENST00000262570 STEAP3Q658P3 488 aa13.53□□□□□ -0.24
CHCHD3-201ENST00000262570 C9orf139Q6ZV77 190 aa13.53□□□□□ -0.24
CHCHD3-201ENST00000262570 BEST4Q8NFU0 473 aa13.53□□□□□ -0.24
CHCHD3-201ENST00000262570 OR9G1Q8NH87 305 aa13.53□□□□□ -0.24
CHCHD3-201ENST00000262570 LEAP2Q969E1 77 aa13.53□□□□□ -0.24
CHCHD3-201ENST00000262570 ANXA10Q9UJ72 324 aa13.53□□□□□ -0.24
CHCHD3-201ENST00000262570 ANAPC10Q9UM13 185 aa13.53□□□□□ -0.24
CHCHD3-201ENST00000262570 NPFFO15130 113 aa13.52□□□□□ -0.25
CHCHD3-201ENST00000262570 YPEL1O60688 119 aa13.52□□□□□ -0.25
CHCHD3-201ENST00000262570 DIRAS3O95661 229 aa13.52□□□□□ -0.25
CHCHD3-201ENST00000262570 IGHV3-7P01780 117 aa13.52□□□□□ -0.25
CHCHD3-201ENST00000262570 SRD5A1P18405 259 aa13.52□□□□□ -0.25
CHCHD3-201ENST00000262570 ETV6P41212 452 aa13.52□□□□□ -0.25
CHCHD3-201ENST00000262570 MORN2Q502X0 79 aa13.52□□□□□ -0.25
CHCHD3-201ENST00000262570 MIDNQ504T8 468 aa13.52□□□□□ -0.25
CHCHD3-201ENST00000262570 IGSF11Q5DX21 431 aa13.52□□□□□ -0.25
CHCHD3-201ENST00000262570 BEND2Q8NDZ0 799 aa13.52□□□□□ -0.25
CHCHD3-201ENST00000262570 OR10V1Q8NGI7 309 aa13.52□□□□□ -0.25
CHCHD3-201ENST00000262570 SNAPC3Q92966 411 aa13.52□□□□□ -0.25
CHCHD3-201ENST00000262570 YPEL2Q96QA6 119 aa13.52□□□□□ -0.25
CHCHD3-201ENST00000262570 CABLES2Q9BTV7 478 aa13.52□□□□□ -0.25
CHCHD3-201ENST00000262570 MS4A7Q9GZW8 240 aaPredicted RBP13.52□□□□□ -0.25
CHCHD3-201ENST00000262570 V9GYH0 126 aa13.52□□□□□ -0.25
CHCHD3-201ENST00000262570 J3QR06 171 aa13.51□□□□□ -0.25
CHCHD3-201ENST00000262570 CTDSPLO15194 276 aa13.51□□□□□ -0.25
CHCHD3-201ENST00000262570 ARG1P05089 322 aa13.51□□□□□ -0.25
CHCHD3-201ENST00000262570 NAT1P18440 290 aa13.51□□□□□ -0.25
CHCHD3-201ENST00000262570 EPHA1P21709 976 aa13.51□□□□□ -0.25
CHCHD3-201ENST00000262570 ZBTB25P24278 435 aa13.51□□□□□ -0.25
CHCHD3-201ENST00000262570 SAA4P35542 130 aa13.51□□□□□ -0.25
CHCHD3-201ENST00000262570 PPP1CCP36873 323 aaKnown RBP13.51□□□□□ -0.25
CHCHD3-201ENST00000262570 MRPS10P82664 201 aaKnown RBP13.51□□□□□ -0.25
CHCHD3-201ENST00000262570 GNMTQ14749 295 aa13.51□□□□□ -0.25
CHCHD3-201ENST00000262570 FAM131AQ6UXB0 335 aa13.51□□□□□ -0.25
CHCHD3-201ENST00000262570 C8orf31Q8N9H6 132 aa13.51□□□□□ -0.25
CHCHD3-201ENST00000262570 ZNF439Q8NDP4 499 aa13.51□□□□□ -0.25
CHCHD3-201ENST00000262570 OR4P4Q8NGL7 312 aa13.51□□□□□ -0.25
CHCHD3-201ENST00000262570 OR52I2Q8NH67 350 aa13.51□□□□□ -0.25
CHCHD3-201ENST00000262570 ZNF596Q8TC21 504 aa13.51□□□□□ -0.25
CHCHD3-201ENST00000262570 IFT46Q9NQC8 304 aa13.51□□□□□ -0.25
CHCHD3-201ENST00000262570 PTTG2Q9NZH5 202 aa13.51□□□□□ -0.25
CHCHD3-201ENST00000262570 OR1A1Q9P1Q5 309 aa13.51□□□□□ -0.25
CHCHD3-201ENST00000262570 SLC23A1Q9UHI7 598 aa13.51□□□□□ -0.25
CHCHD3-201ENST00000262570 SOX21Q9Y651 276 aaPredicted RBP13.51□□□□□ -0.25
CHCHD3-201ENST00000262570 TRBV6-7A0A0A0MS04 114 aa13.5□□□□□ -0.25
CHCHD3-201ENST00000262570 GABARAPH6UMI1 98 aa13.5□□□□□ -0.25
CHCHD3-201ENST00000262570 TOR1AO14656 332 aa13.5□□□□□ -0.25
CHCHD3-201ENST00000262570 FCER2P06734 321 aa13.5□□□□□ -0.25
CHCHD3-201ENST00000262570 ZNF134P52741 427 aa13.5□□□□□ -0.25
CHCHD3-201ENST00000262570 PRRX1P54821 245 aa13.5□□□□□ -0.25
CHCHD3-201ENST00000262570 TUSC1Q2TAM9 212 aa13.5□□□□□ -0.25
CHCHD3-201ENST00000262570 HLA-DRB5Q30154 266 aa13.5□□□□□ -0.25
CHCHD3-201ENST00000262570 LY6G6FQ5SQ64 297 aa13.5□□□□□ -0.25
CHCHD3-201ENST00000262570 BCL6BQ8N143 479 aaPredicted RBP13.5□□□□□ -0.25
CHCHD3-201ENST00000262570 LINC00311Q8N616 119 aa13.5□□□□□ -0.25
CHCHD3-201ENST00000262570 C22orf15Q8WYQ4 148 aa13.5□□□□□ -0.25
CHCHD3-201ENST00000262570 AJUBAQ96IF1 538 aa13.5□□□□□ -0.25
CHCHD3-201ENST00000262570 TOLLIPQ9H0E2 274 aa13.5□□□□□ -0.25
CHCHD3-201ENST00000262570 KLK11Q9UBX7 282 aa13.5□□□□□ -0.25
CHCHD3-201ENST00000262570 A0A1W2PPE3 182 aa13.49□□□□□ -0.25
CHCHD3-201ENST00000262570 BET1O15155 118 aa13.49□□□□□ -0.25
CHCHD3-201ENST00000262570 HSPA12AO43301 675 aa13.49□□□□□ -0.25
CHCHD3-201ENST00000262570 RGS11O94810 467 aa13.49□□□□□ -0.25
CHCHD3-201ENST00000262570 CTXN2P0C2S0 81 aa13.49□□□□□ -0.25
CHCHD3-201ENST00000262570 FAM157CP0CG43 387 aa13.49□□□□□ -0.25
CHCHD3-201ENST00000262570 PTBP1P26599 531 aaKnown RBP eCLIP13.49□□□□□ -0.251e-6■■■■□ 25.8
CHCHD3-201ENST00000262570 CEACAM6P40199 344 aa13.49□□□□□ -0.25
CHCHD3-201ENST00000262570 GNG10P50151 68 aa13.49□□□□□ -0.25
CHCHD3-201ENST00000262570 LGALS4P56470 323 aa13.49□□□□□ -0.25
CHCHD3-201ENST00000262570 SPANXN2Q5MJ10 180 aa13.49□□□□□ -0.25
CHCHD3-201ENST00000262570 LDLRAD2Q5SZI1 272 aa13.49□□□□□ -0.25
CHCHD3-201ENST00000262570 LINC00299Q6ZSB3 139 aa13.49□□□□□ -0.25
CHCHD3-201ENST00000262570 SLC25A48Q6ZT89 311 aaKnown RBP13.49□□□□□ -0.25
CHCHD3-201ENST00000262570 LHFPL4Q7Z7J7 247 aa13.49□□□□□ -0.25
CHCHD3-201ENST00000262570 LURAP1LQ8IV03 231 aa13.49□□□□□ -0.25
CHCHD3-201ENST00000262570 OR10J5Q8NHC4 309 aa13.49□□□□□ -0.25
CHCHD3-201ENST00000262570 SMIM4Q8WVI0 70 aa13.49□□□□□ -0.25
CHCHD3-201ENST00000262570 FCAMRQ8WWV6 532 aa13.49□□□□□ -0.25
CHCHD3-201ENST00000262570 MMP28Q9H239 520 aa13.49□□□□□ -0.25
CHCHD3-201ENST00000262570 ZNRD1Q9P1U0 126 aa13.49□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 41.5 ms