RNA–Protein interactions for RNA: ENST00000261889.9

SNX1-201, Transcript of sorting nexin 1, humanhuman

TSL 2 BASIC

Gene SNX1, Length 3,373 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX1-201ENST00000261889 C1orf87Q8N0U7 546 aa11.08□□□□□ -0.64
SNX1-201ENST00000261889 ZNF664Q8N3J9 261 aa11.08□□□□□ -0.64
SNX1-201ENST00000261889 OR5P3Q8WZ94 311 aa11.08□□□□□ -0.64
SNX1-201ENST00000261889 FAM234AQ9H0X4 552 aa11.08□□□□□ -0.64
SNX1-201ENST00000261889 Q9N2K0 584 aa11.08□□□□□ -0.64
SNX1-201ENST00000261889 PCNX1Q96RV3 2341 aa11.08□□□□□ -0.64
SNX1-201ENST00000261889 EXPH5Q8NEV8 1989 aa11.08□□□□□ -0.64
SNX1-201ENST00000261889 C1QTNF9BB2RNN3 333 aa11.08□□□□□ -0.64
SNX1-201ENST00000261889 KRASP01116 189 aa11.08□□□□□ -0.64
SNX1-201ENST00000261889 NR2C1P13056 603 aa11.08□□□□□ -0.64
SNX1-201ENST00000261889 UCP2P55851 309 aa11.08□□□□□ -0.64
SNX1-201ENST00000261889 RAB1AP62820 205 aa11.08□□□□□ -0.64
SNX1-201ENST00000261889 ZNF816Q0VGE8 651 aaPredicted RBP11.08□□□□□ -0.64
SNX1-201ENST00000261889 XKRY2A2RUG3 117 aa11.08□□□□□ -0.64
SNX1-201ENST00000261889 A6NNC1 897 aa11.08□□□□□ -0.64
SNX1-201ENST00000261889 YKT6O15498 198 aa11.08□□□□□ -0.64
SNX1-201ENST00000261889 PGLYRP1O75594 196 aaPredicted RBP11.08□□□□□ -0.64
SNX1-201ENST00000261889 IFNA5P01569 189 aa11.08□□□□□ -0.64
SNX1-201ENST00000261889 SUMO3P55854 103 aaPredicted RBP11.08□□□□□ -0.64
SNX1-201ENST00000261889 ZFP36L1Q07352 338 aaKnown RBP11.08□□□□□ -0.64
SNX1-201ENST00000261889 PRDX4Q13162 271 aa11.08□□□□□ -0.64
SNX1-201ENST00000261889 EIF3IQ13347 325 aaKnown RBP11.08□□□□□ -0.64
SNX1-201ENST00000261889 PMS2P11Q13670 270 aa11.08□□□□□ -0.64
SNX1-201ENST00000261889 BTNL3Q6UXE8 466 aa11.08□□□□□ -0.64
SNX1-201ENST00000261889 HAPLN4Q86UW8 402 aa11.08□□□□□ -0.64
SNX1-201ENST00000261889 C1orf210Q8IVY1 113 aa11.08□□□□□ -0.64
SNX1-201ENST00000261889 OR10D3Q8NH80 312 aa11.08□□□□□ -0.64
SNX1-201ENST00000261889 AMBPP02760 352 aa11.07□□□□□ -0.64
SNX1-201ENST00000261889 CST9LP1Q5W188 147 aa11.07□□□□□ -0.64
SNX1-201ENST00000261889 SPINK14Q6IE38 97 aa11.07□□□□□ -0.64
SNX1-201ENST00000261889 COMMD1Q8N668 190 aa11.07□□□□□ -0.64
SNX1-201ENST00000261889 SCGB1C1Q8TD33 95 aa11.07□□□□□ -0.64
SNX1-201ENST00000261889 OR2H1Q9GZK4 316 aa11.07□□□□□ -0.64
SNX1-201ENST00000261889 C12orf49Q9H741 205 aa11.07□□□□□ -0.64
SNX1-201ENST00000261889 TMEM38BQ9NVV0 291 aa11.07□□□□□ -0.64
SNX1-201ENST00000261889 OR14J1Q9UGF5 321 aa11.07□□□□□ -0.64
SNX1-201ENST00000261889 PINLYPA6NC86 204 aa11.07□□□□□ -0.64
SNX1-201ENST00000261889 TP53I11O14683 189 aa11.07□□□□□ -0.64
SNX1-201ENST00000261889 CLDN1O95832 211 aa11.07□□□□□ -0.64
SNX1-201ENST00000261889 CFIP05156 583 aa11.07□□□□□ -0.64
SNX1-201ENST00000261889 LIFP15018 202 aa11.07□□□□□ -0.64
SNX1-201ENST00000261889 OTX1P32242 354 aaPredicted RBP11.07□□□□□ -0.64
SNX1-201ENST00000261889 FAM189A2Q15884 450 aa11.07□□□□□ -0.64
SNX1-201ENST00000261889 TCF23Q7RTU1 214 aa11.07□□□□□ -0.64
SNX1-201ENST00000261889 LHX4Q969G2 390 aa11.07□□□□□ -0.64
SNX1-201ENST00000261889 SPSB1Q96BD6 273 aa11.07□□□□□ -0.64
SNX1-201ENST00000261889 CLN8Q9UBY8 286 aa11.07□□□□□ -0.64
SNX1-201ENST00000261889 LOC102723971A0A1B0GUV8 181 aa11.07□□□□□ -0.64
SNX1-201ENST00000261889 hCG_38984A0A1B0GV85 526 aa11.07□□□□□ -0.64
SNX1-201ENST00000261889 NPIPB13A6NJU9 1138 aa11.07□□□□□ -0.64
SNX1-201ENST00000261889 NPIPB4C9JG80 1138 aa11.07□□□□□ -0.64
SNX1-201ENST00000261889 FAM27BQ5VT28 67 aa11.07□□□□□ -0.64
SNX1-201ENST00000261889 LFNGQ8NES3 379 aa11.07□□□□□ -0.64
SNX1-201ENST00000261889 OR4F5Q8NH21 305 aa11.07□□□□□ -0.64
SNX1-201ENST00000261889 ZDHHC16Q969W1 377 aa11.07□□□□□ -0.64
SNX1-201ENST00000261889 HIST1H2AAQ96QV6 131 aa11.07□□□□□ -0.64
SNX1-201ENST00000261889 OR4C12Q96R67 309 aa11.07□□□□□ -0.64
SNX1-201ENST00000261889 OR4F4Q96R69 305 aa11.07□□□□□ -0.64
SNX1-201ENST00000261889 ATP5SQ99766 215 aa11.07□□□□□ -0.64
SNX1-201ENST00000261889 DERL1Q9BUN8 251 aa11.07□□□□□ -0.64
SNX1-201ENST00000261889 PSENENQ9NZ42 101 aa11.07□□□□□ -0.64
SNX1-201ENST00000261889 TNCP24821 2201 aa11.06□□□□□ -0.64
SNX1-201ENST00000261889 PIEZO2Q9H5I5 2752 aa11.06□□□□□ -0.64
SNX1-201ENST00000261889 GRIFINA4D1Z8 144 aa11.06□□□□□ -0.64
SNX1-201ENST00000261889 MAP1LC3B2A6NCE7 125 aa11.06□□□□□ -0.64
SNX1-201ENST00000261889 FAM166BA8MTA8 275 aa11.06□□□□□ -0.64
SNX1-201ENST00000261889 DEFB108AA8MXU0 73 aa11.06□□□□□ -0.64
SNX1-201ENST00000261889 SPINK4O60575 86 aa11.06□□□□□ -0.64
SNX1-201ENST00000261889 IGKV1-39P01597 117 aa11.06□□□□□ -0.64
SNX1-201ENST00000261889 IGKV1D-39P04432 117 aa11.06□□□□□ -0.64
SNX1-201ENST00000261889 DTYMKP23919 212 aa11.06□□□□□ -0.64
SNX1-201ENST00000261889 CLDN15P56746 228 aa11.06□□□□□ -0.64
SNX1-201ENST00000261889 TLE4Q04727 773 aa11.06□□□□□ -0.64
SNX1-201ENST00000261889 SSX2Q16385 188 aa11.06□□□□□ -0.64
SNX1-201ENST00000261889 NMSQ5H8A3 153 aa11.06□□□□□ -0.64
SNX1-201ENST00000261889 TMEM54Q969K7 222 aa11.06□□□□□ -0.64
SNX1-201ENST00000261889 MALSU1Q96EH3 234 aa11.06□□□□□ -0.64
SNX1-201ENST00000261889 GPR87Q9BY21 358 aa11.06□□□□□ -0.64
SNX1-201ENST00000261889 MAP1LC3BQ9GZQ8 125 aa11.06□□□□□ -0.64
SNX1-201ENST00000261889 DECR2Q9NUI1 292 aa11.06□□□□□ -0.64
SNX1-201ENST00000261889 TSTD3H0UI37 97 aa11.06□□□□□ -0.64
SNX1-201ENST00000261889 GATCO43716 136 aaKnown RBP11.06□□□□□ -0.64
SNX1-201ENST00000261889 GZMBP10144 247 aa11.06□□□□□ -0.64
SNX1-201ENST00000261889 BCL2P10415 239 aa11.06□□□□□ -0.64
SNX1-201ENST00000261889 TAS2R30P59541 319 aa11.06□□□□□ -0.64
SNX1-201ENST00000261889 PCOLCEQ15113 449 aa11.06□□□□□ -0.64
SNX1-201ENST00000261889 RAB35Q15286 201 aa11.06□□□□□ -0.64
SNX1-201ENST00000261889 LHFPL2Q6ZUX7 228 aa11.06□□□□□ -0.64
SNX1-201ENST00000261889 MRPL41Q8IXM3 137 aaKnown RBP11.06□□□□□ -0.64
SNX1-201ENST00000261889 ANGPTL4Q9BY76 406 aa11.06□□□□□ -0.64
SNX1-201ENST00000261889 COL5A1P20908 1838 aaPredicted RBP11.06□□□□□ -0.64
SNX1-201ENST00000261889 NBASA2RRP1 2371 aa11.06□□□□□ -0.64
SNX1-201ENST00000261889 IGHV3-43A0A0B4J1X8 118 aa11.05□□□□□ -0.64
SNX1-201ENST00000261889 CLDN34H7C241 214 aa11.05□□□□□ -0.64
SNX1-201ENST00000261889 RAMP3O60896 148 aa11.05□□□□□ -0.64
SNX1-201ENST00000261889 UMODP07911 640 aa11.05□□□□□ -0.64
SNX1-201ENST00000261889 IGHV3-43DP0DP04 118 aa11.05□□□□□ -0.64
SNX1-201ENST00000261889 CA6P23280 308 aa11.05□□□□□ -0.64
SNX1-201ENST00000261889 ZNF506Q5JVG8 444 aa11.05□□□□□ -0.64
SNX1-201ENST00000261889 RPS19BP1Q86WX3 136 aaKnown RBP11.05□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 42.7 ms