RNA–Protein interactions for RNA: ENST00000261556.10

TMEM260-201, Transcript of transmembrane protein 260, humanhuman

APPRIS P1 TSL 2 BASIC

Gene TMEM260, Length 4,264 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM260-201ENST00000261556 ZNF841Q6ZN19 808 aa11.33□□□□□ -0.6
TMEM260-201ENST00000261556 OR4D5Q8NGN0 318 aa11.33□□□□□ -0.6
TMEM260-201ENST00000261556 PIGTQ969N2 578 aa11.33□□□□□ -0.6
TMEM260-201ENST00000261556 NGBQ9NPG2 151 aa11.33□□□□□ -0.6
TMEM260-201ENST00000261556 THYN1Q9P016 225 aa11.33□□□□□ -0.6
TMEM260-201ENST00000261556 WDR81Q562E7 1941 aa11.33□□□□□ -0.6
TMEM260-201ENST00000261556 PPIAL4DF5H284 164 aa11.32□□□□□ -0.6
TMEM260-201ENST00000261556 PAGE4O60829 102 aa11.32□□□□□ -0.6
TMEM260-201ENST00000261556 MT-ATP6P00846 226 aa11.32□□□□□ -0.6
TMEM260-201ENST00000261556 HIST1H1DP16402 221 aaKnown RBP11.32□□□□□ -0.6
TMEM260-201ENST00000261556 MPV17L2Q567V2 206 aa11.32□□□□□ -0.6
TMEM260-201ENST00000261556 C1QL3Q5VWW1 255 aa11.32□□□□□ -0.6
TMEM260-201ENST00000261556 MRPL54Q6P161 138 aaKnown RBP11.32□□□□□ -0.6
TMEM260-201ENST00000261556 CDX2Q99626 313 aaPredicted RBP11.32□□□□□ -0.6
TMEM260-201ENST00000261556 C20orf144Q9BQM9 153 aa11.32□□□□□ -0.6
TMEM260-201ENST00000261556 MRPL18Q9H0U6 180 aaKnown RBP11.32□□□□□ -0.6
TMEM260-201ENST00000261556 PEF1Q9UBV8 284 aaKnown RBP11.32□□□□□ -0.6
TMEM260-201ENST00000261556 IL18BPO95998 194 aa11.32□□□□□ -0.6
TMEM260-201ENST00000261556 PRTGQ2VWP7 1150 aa11.32□□□□□ -0.6
TMEM260-201ENST00000261556 FCRL6Q6DN72 434 aa11.32□□□□□ -0.6
TMEM260-201ENST00000261556 LINC01555Q8NAE3 123 aa11.32□□□□□ -0.6
TMEM260-201ENST00000261556 OR52M1Q8NGK5 317 aa11.32□□□□□ -0.6
TMEM260-201ENST00000261556 OR13G1Q8NGZ3 307 aa11.32□□□□□ -0.6
TMEM260-201ENST00000261556 ZDHHC19Q8WVZ1 309 aaPredicted RBP11.32□□□□□ -0.6
TMEM260-201ENST00000261556 CFHR5Q9BXR6 569 aa11.32□□□□□ -0.6
TMEM260-201ENST00000261556 DOCK1Q14185 1865 aa11.32□□□□□ -0.6
TMEM260-201ENST00000261556 COL6A6A6NMZ7 2263 aa11.32□□□□□ -0.6
TMEM260-201ENST00000261556 A0A1W2PP11 408 aa11.32□□□□□ -0.6
TMEM260-201ENST00000261556 CORTO00230 105 aa11.32□□□□□ -0.6
TMEM260-201ENST00000261556 HSPB6O14558 160 aa11.32□□□□□ -0.6
TMEM260-201ENST00000261556 RBFOX2O43251 390 aaKnown RBP eCLIP11.32□□□□□ -0.6
TMEM260-201ENST00000261556 LTC4SQ16873 150 aa11.32□□□□□ -0.6
TMEM260-201ENST00000261556 RNF133Q8WVZ7 376 aa11.32□□□□□ -0.6
TMEM260-201ENST00000261556 ZNRF4Q8WWF5 429 aa11.32□□□□□ -0.6
TMEM260-201ENST00000261556 UHRF2Q96PU4 802 aa11.32□□□□□ -0.6
TMEM260-201ENST00000261556 PECRQ9BY49 303 aa11.32□□□□□ -0.6
TMEM260-201ENST00000261556 ESPL1Q14674 2120 aa11.32□□□□□ -0.6
TMEM260-201ENST00000261556 A0A1B0GW15 77 aa11.32□□□□□ -0.6
TMEM260-201ENST00000261556 ADAM20O43506 726 aa11.32□□□□□ -0.6
TMEM260-201ENST00000261556 EPPINO95925 133 aa11.32□□□□□ -0.6
TMEM260-201ENST00000261556 PTGER4P35408 488 aa11.32□□□□□ -0.6
TMEM260-201ENST00000261556 DUSP2Q05923 314 aa11.32□□□□□ -0.6
TMEM260-201ENST00000261556 SPEM2Q0P670 501 aa11.32□□□□□ -0.6
TMEM260-201ENST00000261556 PLPPR5Q32ZL2 321 aa11.32□□□□□ -0.6
TMEM260-201ENST00000261556 BRICD5Q6PL45 260 aa11.32□□□□□ -0.6
TMEM260-201ENST00000261556 MRGPRGQ86SM5 289 aa11.32□□□□□ -0.6
TMEM260-201ENST00000261556 PAQR4Q8N4S7 273 aaPredicted RBP11.32□□□□□ -0.6
TMEM260-201ENST00000261556 OR51E1Q8TCB6 317 aa11.32□□□□□ -0.6
TMEM260-201ENST00000261556 GPR35Q9HC97 309 aa11.32□□□□□ -0.6
TMEM260-201ENST00000261556 GBF1Q92538 1859 aa11.31□□□□□ -0.6
TMEM260-201ENST00000261556 IGHV1OR15-9A0A0B4J2B8 117 aa11.31□□□□□ -0.6
TMEM260-201ENST00000261556 IGHV5-51A0A0C4DH38 117 aa11.31□□□□□ -0.6
TMEM260-201ENST00000261556 OTOL1A6NHN0 477 aaPredicted RBP11.31□□□□□ -0.6
TMEM260-201ENST00000261556 CXCL13O43927 109 aa11.31□□□□□ -0.6
TMEM260-201ENST00000261556 FCER1GP30273 86 aa11.31□□□□□ -0.6
TMEM260-201ENST00000261556 RPL27P61353 136 aaKnown RBP11.31□□□□□ -0.6
TMEM260-201ENST00000261556 SLAQ13239 276 aa11.31□□□□□ -0.6
TMEM260-201ENST00000261556 PLGLAQ15195 96 aa11.31□□□□□ -0.6
TMEM260-201ENST00000261556 GJC3Q8NFK1 279 aa11.31□□□□□ -0.6
TMEM260-201ENST00000261556 SFRP2Q96HF1 295 aa11.31□□□□□ -0.6
TMEM260-201ENST00000261556 MED29Q9NX70 200 aa11.31□□□□□ -0.6
TMEM260-201ENST00000261556 CLEC18AA5D8T8 446 aa11.31□□□□□ -0.6
TMEM260-201ENST00000261556 TIMM8AO60220 97 aaPredicted RBP11.31□□□□□ -0.6
TMEM260-201ENST00000261556 PAX2Q02962 417 aa11.31□□□□□ -0.6
TMEM260-201ENST00000261556 LCN12Q6JVE5 192 aa11.31□□□□□ -0.6
TMEM260-201ENST00000261556 C12orf54Q6X4T0 127 aa11.31□□□□□ -0.6
TMEM260-201ENST00000261556 CLEC18CQ8NCF0 446 aa11.31□□□□□ -0.6
TMEM260-201ENST00000261556 NEIL1Q96FI4 390 aaPredicted RBP11.31□□□□□ -0.6
TMEM260-201ENST00000261556 ZC2HC1AQ96GY0 325 aa11.31□□□□□ -0.6
TMEM260-201ENST00000261556 SCN3AQ9NY46 2000 aa11.31□□□□□ -0.6
TMEM260-201ENST00000261556 IGHV2OR16-5A0A0B4J2B6 119 aa11.31□□□□□ -0.6
TMEM260-201ENST00000261556 KIR2DL5BA0A0G2JN68 375 aa11.31□□□□□ -0.6
TMEM260-201ENST00000261556 KIR2DL5BA0A0G2JPC4 375 aa11.31□□□□□ -0.6
TMEM260-201ENST00000261556 C20orf196Q8IYI0 205 aa11.31□□□□□ -0.6
TMEM260-201ENST00000261556 KIR2DL5AQ8N109 375 aa11.31□□□□□ -0.6
TMEM260-201ENST00000261556 LRRC3BQ96PB8 259 aa11.31□□□□□ -0.6
TMEM260-201ENST00000261556 GABRG3Q99928 467 aa11.31□□□□□ -0.6
TMEM260-201ENST00000261556 KIAA1217Q5T5P2 1943 aa11.31□□□□□ -0.6
TMEM260-201ENST00000261556 NKX2-6A6NCS4 301 aa11.3□□□□□ -0.6
TMEM260-201ENST00000261556 MPPED1O15442 326 aa11.3□□□□□ -0.6
TMEM260-201ENST00000261556 CELA2BP08218 269 aaPredicted RBP11.3□□□□□ -0.6
TMEM260-201ENST00000261556 CEACAM3P40198 252 aa11.3□□□□□ -0.6
TMEM260-201ENST00000261556 DMWDQ09019 674 aa11.3□□□□□ -0.6
TMEM260-201ENST00000261556 ZNF260Q3ZCT1 412 aa11.3□□□□□ -0.6
TMEM260-201ENST00000261556 TMEM177Q53S58 311 aa11.3□□□□□ -0.6
TMEM260-201ENST00000261556 PRSS41Q7RTY9 318 aa11.3□□□□□ -0.6
TMEM260-201ENST00000261556 CLDND2Q8NHS1 167 aa11.3□□□□□ -0.6
TMEM260-201ENST00000261556 TRBV6-7A0A0A0MS04 114 aa11.3□□□□□ -0.6
TMEM260-201ENST00000261556 SIRPB1O00241 398 aa11.3□□□□□ -0.6
TMEM260-201ENST00000261556 CHST1O43916 411 aa11.3□□□□□ -0.6
TMEM260-201ENST00000261556 VSIG8P0DPA2 414 aa11.3□□□□□ -0.6
TMEM260-201ENST00000261556 MEF2BQ02080 365 aaPredicted RBP11.3□□□□□ -0.6
TMEM260-201ENST00000261556 PRSS8Q16651 343 aa11.3□□□□□ -0.6
TMEM260-201ENST00000261556 ZNF793Q6ZN11 406 aa11.3□□□□□ -0.6
TMEM260-201ENST00000261556 LIPHQ8WWY8 451 aa11.3□□□□□ -0.6
TMEM260-201ENST00000261556 ADAT3Q96EY9 351 aaPredicted RBP11.3□□□□□ -0.6
TMEM260-201ENST00000261556 NRN1Q9NPD7 142 aa11.3□□□□□ -0.6
TMEM260-201ENST00000261556 NECAP2Q9NVZ3 263 aa11.3□□□□□ -0.6
TMEM260-201ENST00000261556 ZNF319Q9P2F9 582 aa11.3□□□□□ -0.6
TMEM260-201ENST00000261556 H3BUT2 72 aa11.3□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 34.7 ms