RNA–Protein interactions for RNA: ENST00000259043.11

TRA2B-201, Transcript of transformer 2 beta homolog, humanhuman

TSL 3

Gene TRA2B, Length 943 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRA2B-201ENST00000259043 PON3Q15166 354 aa3.23□□□□□ -1.89
TRA2B-201ENST00000259043 NNATQ16517 81 aa3.23□□□□□ -1.89
TRA2B-201ENST00000259043 MRPL23Q16540 153 aaKnown RBP3.23□□□□□ -1.89
TRA2B-201ENST00000259043 LIN52Q52LA3 116 aa3.23□□□□□ -1.89
TRA2B-201ENST00000259043 CASC10Q5T4H9 136 aa3.23□□□□□ -1.89
TRA2B-201ENST00000259043 REEP3Q6NUK4 255 aa3.23□□□□□ -1.89
TRA2B-201ENST00000259043 TNFAIP8L2Q6P589 184 aaPredicted RBP3.23□□□□□ -1.89
TRA2B-201ENST00000259043 CYP4Z1Q86W10 505 aa3.23□□□□□ -1.89
TRA2B-201ENST00000259043 PLCZ1Q86YW0 608 aa3.23□□□□□ -1.89
TRA2B-201ENST00000259043 MSRB3Q8IXL7 192 aa3.23□□□□□ -1.89
TRA2B-201ENST00000259043 ST13P4Q8IZP2 240 aaPredicted RBP3.23□□□□□ -1.89
TRA2B-201ENST00000259043 CBR4Q8N4T8 237 aa3.23□□□□□ -1.89
TRA2B-201ENST00000259043 PACRGLQ8N7B6 248 aa3.23□□□□□ -1.89
TRA2B-201ENST00000259043 ZNF555Q8NEP9 628 aa3.23□□□□□ -1.89
TRA2B-201ENST00000259043 OR5M1Q8NGP8 315 aa3.23□□□□□ -1.89
TRA2B-201ENST00000259043 OR1S2Q8NGQ3 325 aa3.23□□□□□ -1.89
TRA2B-201ENST00000259043 OR1N2Q8NGR9 330 aa3.23□□□□□ -1.89
TRA2B-201ENST00000259043 FANK1Q8TC84 345 aa3.23□□□□□ -1.89
TRA2B-201ENST00000259043 ZFP90Q8TF47 636 aa3.23□□□□□ -1.89
TRA2B-201ENST00000259043 CYGBQ8WWM9 190 aa3.23□□□□□ -1.89
TRA2B-201ENST00000259043 MAL2Q969L2 176 aa3.23□□□□□ -1.89
TRA2B-201ENST00000259043 TM4SF18Q96CE8 201 aa3.23□□□□□ -1.89
TRA2B-201ENST00000259043 CENPNQ96H22 339 aaPredicted RBP3.23□□□□□ -1.89
TRA2B-201ENST00000259043 PYURFQ96I23 114 aa3.23□□□□□ -1.89
TRA2B-201ENST00000259043 SLC35G5Q96KT7 338 aa3.23□□□□□ -1.89
TRA2B-201ENST00000259043 NRIP2Q9BQI9 281 aa3.23□□□□□ -1.89
TRA2B-201ENST00000259043 ZNF717Q9BY31 904 aaPredicted RBP3.23□□□□□ -1.89
TRA2B-201ENST00000259043 ANKRD60Q9BZ19 345 aa3.23□□□□□ -1.89
TRA2B-201ENST00000259043 DNTTIP1Q9H147 329 aa3.23□□□□□ -1.89
TRA2B-201ENST00000259043 RPF2Q9H7B2 306 aaKnown RBP3.23□□□□□ -1.89
TRA2B-201ENST00000259043 REEP1Q9H902 201 aa3.23□□□□□ -1.89
TRA2B-201ENST00000259043 CBLN4Q9NTU7 201 aa3.23□□□□□ -1.89
TRA2B-201ENST00000259043 ZNF337Q9Y3M9 751 aa3.23□□□□□ -1.89
TRA2B-201ENST00000259043 SLC25A15Q9Y619 301 aa3.23□□□□□ -1.89
TRA2B-201ENST00000259043 EPPK1P58107 5090 aaKnown RBP3.23□□□□□ -1.89
TRA2B-201ENST00000259043 A0A0B4J2A0 478 aa3.22□□□□□ -1.89
TRA2B-201ENST00000259043 UPK1AO00322 258 aa3.22□□□□□ -1.89
TRA2B-201ENST00000259043 ACOX3O15254 700 aa3.22□□□□□ -1.89
TRA2B-201ENST00000259043 GPR75O95800 540 aa3.22□□□□□ -1.89
TRA2B-201ENST00000259043 OPN1SWP03999 348 aa3.22□□□□□ -1.89
TRA2B-201ENST00000259043 IFNW1P05000 195 aa3.22□□□□□ -1.89
TRA2B-201ENST00000259043 ELK1P19419 428 aa3.22□□□□□ -1.89
TRA2B-201ENST00000259043 STOMP27105 288 aa3.22□□□□□ -1.89
TRA2B-201ENST00000259043 KDELR2P33947 212 aa3.22□□□□□ -1.89
TRA2B-201ENST00000259043 RBMXP38159 391 aaKnown RBP3.22□□□□□ -1.89
TRA2B-201ENST00000259043 GZMMP51124 257 aa3.22□□□□□ -1.89
TRA2B-201ENST00000259043 XKP51811 444 aa3.22□□□□□ -1.89
TRA2B-201ENST00000259043 CRISP3P54108 245 aa3.22□□□□□ -1.89
TRA2B-201ENST00000259043 PLCXD2Q0VAA5 305 aa3.22□□□□□ -1.89
TRA2B-201ENST00000259043 ECH1Q13011 328 aa3.22□□□□□ -1.89
TRA2B-201ENST00000259043 BIKQ13323 160 aa3.22□□□□□ -1.89
TRA2B-201ENST00000259043 MAB21L1Q13394 359 aa3.22□□□□□ -1.89
TRA2B-201ENST00000259043 ZNHIT3Q15649 155 aaPredicted RBP3.22□□□□□ -1.89
TRA2B-201ENST00000259043 SLC48A1Q6P1K1 146 aa3.22□□□□□ -1.89
TRA2B-201ENST00000259043 CNIH2Q6PI25 160 aa3.22□□□□□ -1.89
TRA2B-201ENST00000259043 TTC33Q6PID6 262 aaPredicted RBP3.22□□□□□ -1.89
TRA2B-201ENST00000259043 C6orf120Q7Z4R8 191 aa3.22□□□□□ -1.89
TRA2B-201ENST00000259043 GALNT10Q86SR1 603 aa3.22□□□□□ -1.89
TRA2B-201ENST00000259043 CALHM3Q86XJ0 350 aa3.22□□□□□ -1.89
TRA2B-201ENST00000259043 PUSL1Q8N0Z8 303 aaKnown RBP3.22□□□□□ -1.89
TRA2B-201ENST00000259043 MUC15Q8N387 334 aa3.22□□□□□ -1.89
TRA2B-201ENST00000259043 PNKDQ8N490 385 aa3.22□□□□□ -1.89
TRA2B-201ENST00000259043 ZDHHC22Q8N966 263 aa3.22□□□□□ -1.89
TRA2B-201ENST00000259043 OR52E4Q8NGH9 312 aa3.22□□□□□ -1.89
TRA2B-201ENST00000259043 OR9A2Q8NGT5 310 aa3.22□□□□□ -1.89
TRA2B-201ENST00000259043 SFXN5Q8TD22 340 aa3.22□□□□□ -1.89
TRA2B-201ENST00000259043 RASSF5Q8WWW0 418 aa3.22□□□□□ -1.89
TRA2B-201ENST00000259043 GEMIN6Q8WXD5 167 aaKnown RBP3.22□□□□□ -1.89
TRA2B-201ENST00000259043 RAB8BQ92930 207 aa3.22□□□□□ -1.89
TRA2B-201ENST00000259043 TMBIM1Q969X1 311 aa3.22□□□□□ -1.89
TRA2B-201ENST00000259043 SGK3Q96BR1 496 aa3.22□□□□□ -1.89
TRA2B-201ENST00000259043 NEURL3Q96EH8 262 aa3.22□□□□□ -1.89
TRA2B-201ENST00000259043 SLC29A1Q99808 456 aa3.22□□□□□ -1.89
TRA2B-201ENST00000259043 SH3GL3Q99963 347 aa3.22□□□□□ -1.89
TRA2B-201ENST00000259043 RARRES2Q99969 163 aa3.22□□□□□ -1.89
TRA2B-201ENST00000259043 DHRS9Q9BPW9 319 aa3.22□□□□□ -1.89
TRA2B-201ENST00000259043 YIPF3Q9GZM5 350 aa3.22□□□□□ -1.89
TRA2B-201ENST00000259043 OR51I1Q9H343 314 aa3.22□□□□□ -1.89
TRA2B-201ENST00000259043 TMEM38AQ9H6F2 299 aa3.22□□□□□ -1.89
TRA2B-201ENST00000259043 CXorf21Q9HAI6 301 aa3.22□□□□□ -1.89
TRA2B-201ENST00000259043 FGF20Q9NP95 211 aaPredicted RBP3.22□□□□□ -1.89
TRA2B-201ENST00000259043 MYOZ1Q9NP98 299 aaPredicted RBP3.22□□□□□ -1.89
TRA2B-201ENST00000259043 RPRD1BQ9NQG5 326 aaKnown RBP3.22□□□□□ -1.89
TRA2B-201ENST00000259043 CALML5Q9NZT1 146 aa3.22□□□□□ -1.89
TRA2B-201ENST00000259043 SHPKQ9UHJ6 478 aa3.22□□□□□ -1.89
TRA2B-201ENST00000259043 SAMHD1Q9Y3Z3 626 aaKnown RBP3.22□□□□□ -1.89
TRA2B-201ENST00000259043 ASB4Q9Y574 426 aa3.22□□□□□ -1.89
TRA2B-201ENST00000259043 TRAV25A0A0B4J276 109 aa3.21□□□□□ -1.9
TRA2B-201ENST00000259043 SMIM31A0A1B0GVY4 71 aa3.21□□□□□ -1.9
TRA2B-201ENST00000259043 CCDC160A6NGH7 325 aa3.21□□□□□ -1.9
TRA2B-201ENST00000259043 H3BNH8 94 aa3.21□□□□□ -1.9
TRA2B-201ENST00000259043 M0QX08 132 aa3.21□□□□□ -1.9
TRA2B-201ENST00000259043 TNFRSF11BO00300 401 aa3.21□□□□□ -1.9
TRA2B-201ENST00000259043 MRPS12O15235 138 aaKnown RBP3.21□□□□□ -1.9
TRA2B-201ENST00000259043 SLC31A2O15432 143 aa3.21□□□□□ -1.9
TRA2B-201ENST00000259043 SCN2BO60939 215 aa3.21□□□□□ -1.9
TRA2B-201ENST00000259043 CCNB2O95067 398 aa3.21□□□□□ -1.9
TRA2B-201ENST00000259043 TNFAIP8O95379 198 aa3.21□□□□□ -1.9
TRA2B-201ENST00000259043 TSPAN13O95857 204 aa3.21□□□□□ -1.9
TRA2B-201ENST00000259043 TACSTD2P09758 323 aa3.21□□□□□ -1.9
Retrieved 100 of 20,778 RNA–protein pairs in 30.8 ms