RNA–Protein interactions for RNA: ENST00000252108.7

UBE4A-201, Transcript of ubiquitination factor E4A, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene UBE4A, Length 6,103 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE4A-201ENST00000252108 THAP3Q8WTV1 239 aaPredicted RBP3.58□□□□□ -1.84
UBE4A-201ENST00000252108 IMMP2LQ96T52 175 aa3.58□□□□□ -1.84
UBE4A-201ENST00000252108 SAMD10Q9BYL1 202 aa3.58□□□□□ -1.84
UBE4A-201ENST00000252108 DHCR7Q9UBM7 475 aaKnown RBP3.58□□□□□ -1.84
UBE4A-201ENST00000252108 COLQQ9Y215 455 aaPredicted RBP3.58□□□□□ -1.84
UBE4A-201ENST00000252108 MPC1Q9Y5U8 109 aa3.58□□□□□ -1.84
UBE4A-201ENST00000252108 ASXL3Q9C0F0 2248 aa3.58□□□□□ -1.84
UBE4A-201ENST00000252108 C20orf202A1L168 122 aa3.58□□□□□ -1.84
UBE4A-201ENST00000252108 C1QTNF9BB2RNN3 333 aa3.58□□□□□ -1.84
UBE4A-201ENST00000252108 LMX1BO60663 402 aa3.58□□□□□ -1.84
UBE4A-201ENST00000252108 SCRG1O75711 98 aa3.58□□□□□ -1.84
UBE4A-201ENST00000252108 CLDN1O95832 211 aa3.58□□□□□ -1.84
UBE4A-201ENST00000252108 COX5BP10606 129 aa3.58□□□□□ -1.84
UBE4A-201ENST00000252108 KITLGP21583 273 aa3.58□□□□□ -1.84
UBE4A-201ENST00000252108 UCP1P25874 307 aa3.58□□□□□ -1.84
UBE4A-201ENST00000252108 RND2P52198 227 aa3.58□□□□□ -1.84
UBE4A-201ENST00000252108 TMEM50BP56557 158 aa3.58□□□□□ -1.84
UBE4A-201ENST00000252108 RBM11P57052 281 aaKnown RBP3.58□□□□□ -1.84
UBE4A-201ENST00000252108 PDLIM3Q53GG5 364 aaPredicted RBP3.58□□□□□ -1.84
UBE4A-201ENST00000252108 RIPPLY2Q5TAB7 128 aa3.58□□□□□ -1.84
UBE4A-201ENST00000252108 CYP2G1PQ6ZSU1 146 aa3.58□□□□□ -1.84
UBE4A-201ENST00000252108 GCNT2Q8N0V5 402 aa3.58□□□□□ -1.84
UBE4A-201ENST00000252108 TMEM217Q8N7C4 229 aa3.58□□□□□ -1.84
UBE4A-201ENST00000252108 BHLHE23Q8NDY6 225 aa3.58□□□□□ -1.84
UBE4A-201ENST00000252108 MBD3L1Q8WWY6 194 aa3.58□□□□□ -1.84
UBE4A-201ENST00000252108 TMEM54Q969K7 222 aa3.58□□□□□ -1.84
UBE4A-201ENST00000252108 ADGRG7Q96K78 797 aa3.58□□□□□ -1.84
UBE4A-201ENST00000252108 FAAP24Q9BTP7 215 aa3.58□□□□□ -1.84
UBE4A-201ENST00000252108 NDUFAF3Q9BU61 184 aa3.58□□□□□ -1.84
UBE4A-201ENST00000252108 RTL8AQ9BWD3 113 aa3.58□□□□□ -1.84
UBE4A-201ENST00000252108 PARP12Q9H0J9 701 aaKnown RBP3.58□□□□□ -1.84
UBE4A-201ENST00000252108 SMG1Q96Q15 3661 aaKnown RBP3.58□□□□□ -1.84
UBE4A-201ENST00000252108 TRBV9A0A0B4J1U6 114 aa3.58□□□□□ -1.84
UBE4A-201ENST00000252108 IGKV1-9A0A0C4DH69 117 aa3.58□□□□□ -1.84
UBE4A-201ENST00000252108 C9orf172C9J069 976 aa3.58□□□□□ -1.84
UBE4A-201ENST00000252108 KRASP01116 189 aa3.58□□□□□ -1.84
UBE4A-201ENST00000252108 PF4P02776 101 aa3.58□□□□□ -1.84
UBE4A-201ENST00000252108 ZNF16P17020 682 aaPredicted RBP3.58□□□□□ -1.84
UBE4A-201ENST00000252108 GDF1P27539 372 aa3.58□□□□□ -1.84
UBE4A-201ENST00000252108 NTF4P34130 210 aa3.58□□□□□ -1.84
UBE4A-201ENST00000252108 CARD18P57730 90 aa3.58□□□□□ -1.84
UBE4A-201ENST00000252108 SUPT4H1P63272 117 aaKnown RBP3.58□□□□□ -1.84
UBE4A-201ENST00000252108 JOSD1Q15040 202 aaPredicted RBP3.58□□□□□ -1.84
UBE4A-201ENST00000252108 DEFB133Q30KQ1 61 aa3.58□□□□□ -1.84
UBE4A-201ENST00000252108 ACER2Q5QJU3 275 aa3.58□□□□□ -1.84
UBE4A-201ENST00000252108 ETFRF1Q6IPR1 90 aa3.58□□□□□ -1.84
UBE4A-201ENST00000252108 TMEM123Q8N131 208 aa3.58□□□□□ -1.84
UBE4A-201ENST00000252108 RNASEH2CQ8TDP1 164 aaKnown RBP3.58□□□□□ -1.84
UBE4A-201ENST00000252108 FRZBQ92765 325 aa3.58□□□□□ -1.84
UBE4A-201ENST00000252108 MSI2Q96DH6 328 aaKnown RBP3.58□□□□□ -1.84
UBE4A-201ENST00000252108 IMMP1LQ96LU5 166 aa3.58□□□□□ -1.84
UBE4A-201ENST00000252108 AGMATQ9BSE5 352 aa3.58□□□□□ -1.84
UBE4A-201ENST00000252108 ATP23Q9Y6H3 246 aa3.58□□□□□ -1.84
UBE4A-201ENST00000252108 C5orf63A6NC05 138 aa3.58□□□□□ -1.84
UBE4A-201ENST00000252108 KLF7O75840 302 aaPredicted RBP3.58□□□□□ -1.84
UBE4A-201ENST00000252108 MT-ND6P03923 174 aa3.58□□□□□ -1.84
UBE4A-201ENST00000252108 RAC3P60763 192 aa3.58□□□□□ -1.84
UBE4A-201ENST00000252108 SLC38A11Q08AI6 406 aa3.58□□□□□ -1.84
UBE4A-201ENST00000252108 MAJINQ3KP22 176 aa3.58□□□□□ -1.84
UBE4A-201ENST00000252108 LCN15Q6UWW0 184 aa3.58□□□□□ -1.84
UBE4A-201ENST00000252108 LINC00696Q6ZRV3 163 aa3.58□□□□□ -1.84
UBE4A-201ENST00000252108 CYB561D1Q8N8Q1 229 aa3.58□□□□□ -1.84
UBE4A-201ENST00000252108 CPEB3Q8NE35 698 aaKnown RBP3.58□□□□□ -1.84
UBE4A-201ENST00000252108 OR10V1Q8NGI7 309 aa3.58□□□□□ -1.84
UBE4A-201ENST00000252108 OR4D5Q8NGN0 318 aa3.58□□□□□ -1.84
UBE4A-201ENST00000252108 RPUSD4Q96CM3 377 aaKnown RBP3.58□□□□□ -1.84
UBE4A-201ENST00000252108 DNAJA3Q96EY1 480 aa3.58□□□□□ -1.84
UBE4A-201ENST00000252108 SDSLQ96GA7 329 aa3.58□□□□□ -1.84
UBE4A-201ENST00000252108 LYZL4Q96KX0 146 aa3.58□□□□□ -1.84
UBE4A-201ENST00000252108 CTNNBIP1Q9NSA3 81 aaPredicted RBP3.58□□□□□ -1.84
UBE4A-201ENST00000252108 NKX2-6A6NCS4 301 aa3.57□□□□□ -1.84
UBE4A-201ENST00000252108 MRPL33O75394 65 aaKnown RBP3.57□□□□□ -1.84
UBE4A-201ENST00000252108 OR2J2O76002 312 aa3.57□□□□□ -1.84
UBE4A-201ENST00000252108 KBTBD11O94819 623 aa3.57□□□□□ -1.84
UBE4A-201ENST00000252108 S100A7P31151 101 aa3.57□□□□□ -1.84
UBE4A-201ENST00000252108 TRA2AQ13595 282 aaKnown RBP eCLIP3.57□□□□□ -1.84
UBE4A-201ENST00000252108 SP6Q3SY56 376 aa3.57□□□□□ -1.84
UBE4A-201ENST00000252108 ABLIM2Q6H8Q1 611 aa3.57□□□□□ -1.84
UBE4A-201ENST00000252108 UBE2DNLQ8IWF7 75 aa3.57□□□□□ -1.84
UBE4A-201ENST00000252108 SUMF1Q8NBK3 374 aa3.57□□□□□ -1.84
UBE4A-201ENST00000252108 AGBL5Q8NDL9 886 aa3.57□□□□□ -1.84
UBE4A-201ENST00000252108 FOXQ1Q9C009 403 aa3.57□□□□□ -1.84
UBE4A-201ENST00000252108 YAE1D1Q9NRH1 226 aa3.57□□□□□ -1.84
UBE4A-201ENST00000252108 TINAGQ9UJW2 476 aa3.57□□□□□ -1.84
UBE4A-201ENST00000252108 RALGAPA1Q6GYQ0 2036 aa3.57□□□□□ -1.84
UBE4A-201ENST00000252108 CLEC18AA5D8T8 446 aa3.57□□□□□ -1.84
UBE4A-201ENST00000252108 ZNF891A8MT65 544 aaPredicted RBP3.57□□□□□ -1.84
UBE4A-201ENST00000252108 MASP2O00187 686 aa3.57□□□□□ -1.84
UBE4A-201ENST00000252108 YIF1AO95070 293 aa3.57□□□□□ -1.84
UBE4A-201ENST00000252108 RPLP1P05386 114 aaKnown RBP3.57□□□□□ -1.84
UBE4A-201ENST00000252108 SRD5A2P31213 254 aa3.57□□□□□ -1.84
UBE4A-201ENST00000252108 GNG3P63215 75 aa3.57□□□□□ -1.84
UBE4A-201ENST00000252108 ZFP36L1Q07352 338 aaKnown RBP3.57□□□□□ -1.84
UBE4A-201ENST00000252108 WFDC8Q8IUA0 241 aa3.57□□□□□ -1.84
UBE4A-201ENST00000252108 SELENOHQ8IZQ5 122 aaKnown RBP3.57□□□□□ -1.84
UBE4A-201ENST00000252108 ZIC4Q8N9L1 334 aa3.57□□□□□ -1.84
UBE4A-201ENST00000252108 CLEC18CQ8NCF0 446 aa3.57□□□□□ -1.84
UBE4A-201ENST00000252108 OR5A2Q8NGI9 324 aa3.57□□□□□ -1.84
UBE4A-201ENST00000252108 OR4F5Q8NH21 305 aa3.57□□□□□ -1.84
UBE4A-201ENST00000252108 CLDND2Q8NHS1 167 aa3.57□□□□□ -1.84
Retrieved 100 of 20,778 RNA–protein pairs in 45.8 ms