RNA–Protein interactions for RNA: ENST00000249014.4

CDC42EP1-201, Transcript of CDC42 effector protein 1, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene CDC42EP1, Length 2,181 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42EP1-201ENST00000249014 WDR31Q8NA23 367 aa16.48■□□□□ 0.23
CDC42EP1-201ENST00000249014 PARD6AQ9NPB6 346 aa16.48■□□□□ 0.23
CDC42EP1-201ENST00000249014 OR14J1Q9UGF5 321 aa16.48■□□□□ 0.23
CDC42EP1-201ENST00000249014 NDUFA2O43678 99 aa16.48■□□□□ 0.23
CDC42EP1-201ENST00000249014 IGKV1-5P01602 117 aa16.48■□□□□ 0.23
CDC42EP1-201ENST00000249014 IGKV3-15P01624 115 aa16.48■□□□□ 0.23
CDC42EP1-201ENST00000249014 CRYBA1P05813 215 aa16.48■□□□□ 0.23
CDC42EP1-201ENST00000249014 ZNF585BQ52M93 769 aa16.48■□□□□ 0.23
CDC42EP1-201ENST00000249014 ZNF826PQ6ZT77 177 aa16.48■□□□□ 0.23
CDC42EP1-201ENST00000249014 RARRES2Q99969 163 aa16.48■□□□□ 0.23
CDC42EP1-201ENST00000249014 HES4Q9HCC6 221 aa16.48■□□□□ 0.23
CDC42EP1-201ENST00000249014 OBP2BQ9NPH6 170 aa16.48■□□□□ 0.23
CDC42EP1-201ENST00000249014 CACNG5Q9UF02 275 aa16.48■□□□□ 0.23
CDC42EP1-201ENST00000249014 KCNS2Q9ULS6 477 aa16.48■□□□□ 0.23
CDC42EP1-201ENST00000249014 RBM7Q9Y580 266 aaKnown RBP16.48■□□□□ 0.23
CDC42EP1-201ENST00000249014 UMAD1C9J7I0 102 aa16.47■□□□□ 0.23
CDC42EP1-201ENST00000249014 WNT9BO14905 357 aa16.47■□□□□ 0.23
CDC42EP1-201ENST00000249014 HAND1O96004 215 aa16.47■□□□□ 0.23
CDC42EP1-201ENST00000249014 CBR1P16152 277 aa16.47■□□□□ 0.23
CDC42EP1-201ENST00000249014 CEACAM6P40199 344 aa16.47■□□□□ 0.23
CDC42EP1-201ENST00000249014 AWAT1Q58HT5 328 aa16.47■□□□□ 0.23
CDC42EP1-201ENST00000249014 SPSB3Q6PJ21 355 aa16.47■□□□□ 0.23
CDC42EP1-201ENST00000249014 IGFL2Q6UWQ7 119 aa16.47■□□□□ 0.23
CDC42EP1-201ENST00000249014 C11orf53Q8IXP5 236 aa16.47■□□□□ 0.23
CDC42EP1-201ENST00000249014 RNASE11Q8TAA1 199 aaKnown RBP16.47■□□□□ 0.23
CDC42EP1-201ENST00000249014 WDR1O75083 606 aa16.47■□□□□ 0.23
CDC42EP1-201ENST00000249014 COX5AP20674 150 aa16.47■□□□□ 0.23
CDC42EP1-201ENST00000249014 FOXF2Q12947 444 aa16.47■□□□□ 0.23
CDC42EP1-201ENST00000249014 CLCC1Q96S66 551 aa16.47■□□□□ 0.23
CDC42EP1-201ENST00000249014 PBDC1Q9BVG4 233 aa16.47■□□□□ 0.23
CDC42EP1-201ENST00000249014 RPS10P5Q9NQ39 176 aa16.47■□□□□ 0.23
CDC42EP1-201ENST00000249014 SMCO4Q9NRQ5 59 aa16.47■□□□□ 0.23
CDC42EP1-201ENST00000249014 TMEM210A6NLX4 147 aa16.46■□□□□ 0.23
CDC42EP1-201ENST00000249014 AQP7O14520 342 aa16.46■□□□□ 0.23
CDC42EP1-201ENST00000249014 TXNL1O43396 289 aa16.46■□□□□ 0.23
CDC42EP1-201ENST00000249014 ZNF16P17020 682 aaPredicted RBP16.46■□□□□ 0.23
CDC42EP1-201ENST00000249014 TMEM267Q0VDI3 215 aaPredicted RBP16.46■□□□□ 0.23
CDC42EP1-201ENST00000249014 LFNGQ8NES3 379 aa16.46■□□□□ 0.23
CDC42EP1-201ENST00000249014 LSM10Q969L4 123 aaKnown RBP16.46■□□□□ 0.23
CDC42EP1-201ENST00000249014 ATP5SQ99766 215 aa16.46■□□□□ 0.23
CDC42EP1-201ENST00000249014 C20orf24Q9BUV8 137 aa16.46■□□□□ 0.23
CDC42EP1-201ENST00000249014 C1QTNF9BB2RNN3 333 aa16.45■□□□□ 0.22
CDC42EP1-201ENST00000249014 DRAM1Q8N682 238 aa16.45■□□□□ 0.22
CDC42EP1-201ENST00000249014 SLC35B3Q9H1N7 401 aa16.45■□□□□ 0.22
CDC42EP1-201ENST00000249014 OTOGLQ3ZCN5 2332 aa16.45■□□□□ 0.22
CDC42EP1-201ENST00000249014 CACNA1GO43497 2377 aa16.45■□□□□ 0.22
CDC42EP1-201ENST00000249014 A0A1B0GW64 132 aa16.45■□□□□ 0.22
CDC42EP1-201ENST00000249014 C7orf77A4D0Y5 90 aa16.45■□□□□ 0.22
CDC42EP1-201ENST00000249014 TFF1P04155 84 aa16.45■□□□□ 0.22
CDC42EP1-201ENST00000249014 SNRNP70P08621 437 aaKnown RBP16.45■□□□□ 0.22
CDC42EP1-201ENST00000249014 OR13C7P0DN81 318 aa16.45■□□□□ 0.22
CDC42EP1-201ENST00000249014 AVPI1Q5T686 147 aa16.45■□□□□ 0.22
CDC42EP1-201ENST00000249014 SP5Q6BEB4 398 aaPredicted RBP16.45■□□□□ 0.22
CDC42EP1-201ENST00000249014 FAM53AQ6NSI3 398 aaPredicted RBP16.45■□□□□ 0.22
CDC42EP1-201ENST00000249014 OR8G5Q8NG78 346 aa16.45■□□□□ 0.22
CDC42EP1-201ENST00000249014 GNPNAT1Q96EK6 184 aaPredicted RBP16.45■□□□□ 0.22
CDC42EP1-201ENST00000249014 ESRP2Q9H6T0 727 aaKnown RBP16.45■□□□□ 0.22
CDC42EP1-201ENST00000249014 FZR1Q9UM11 496 aa16.45■□□□□ 0.22
CDC42EP1-201ENST00000249014 DIDO1Q9BTC0 2240 aaKnown RBP16.45■□□□□ 0.22
CDC42EP1-201ENST00000249014 CNOT4O95628 575 aaKnown RBP16.44■□□□□ 0.22
CDC42EP1-201ENST00000249014 ACAA1P09110 424 aaPredicted RBP16.44■□□□□ 0.22
CDC42EP1-201ENST00000249014 CEACAM1P13688 526 aa16.44■□□□□ 0.22
CDC42EP1-201ENST00000249014 SULT1A1P50225 295 aa16.44■□□□□ 0.22
CDC42EP1-201ENST00000249014 RAB13P51153 203 aa16.44■□□□□ 0.22
CDC42EP1-201ENST00000249014 RPL23AP62750 156 aaKnown RBP16.44■□□□□ 0.22
CDC42EP1-201ENST00000249014 STX12Q86Y82 276 aa16.44■□□□□ 0.22
CDC42EP1-201ENST00000249014 OR1L1Q8NH94 360 aa16.44■□□□□ 0.22
CDC42EP1-201ENST00000249014 C14orf79Q96F83 325 aa16.44■□□□□ 0.22
CDC42EP1-201ENST00000249014 RAB40CQ96S21 281 aa16.44■□□□□ 0.22
CDC42EP1-201ENST00000249014 DMXL1Q9Y485 3027 aa16.44■□□□□ 0.22
CDC42EP1-201ENST00000249014 INTS1Q8N201 2190 aaKnown RBP16.44■□□□□ 0.22
CDC42EP1-201ENST00000249014 PIGBOS1A0A0B4J2F0 54 aa16.44■□□□□ 0.22
CDC42EP1-201ENST00000249014 Q6ZR03 302 aa16.44■□□□□ 0.22
CDC42EP1-201ENST00000249014 KCNJ16Q9NPI9 418 aa16.44■□□□□ 0.22
CDC42EP1-201ENST00000249014 LIN7CQ9NUP9 197 aaKnown RBP16.44■□□□□ 0.22
CDC42EP1-201ENST00000249014 WSB1Q9Y6I7 421 aa16.44■□□□□ 0.22
CDC42EP1-201ENST00000249014 TTC28Q96AY4 2481 aa16.44■□□□□ 0.22
CDC42EP1-201ENST00000249014 EP300Q09472 2414 aaPredicted RBP16.43■□□□□ 0.22
CDC42EP1-201ENST00000249014 TRAV17A0A0B4J275 112 aa16.43■□□□□ 0.22
CDC42EP1-201ENST00000249014 M0R036 132 aa16.43■□□□□ 0.22
CDC42EP1-201ENST00000249014 CECR9P0C854 216 aa16.43■□□□□ 0.22
CDC42EP1-201ENST00000249014 IAPPP10997 89 aa16.43■□□□□ 0.22
CDC42EP1-201ENST00000249014 HOXB1P14653 301 aaPredicted RBP16.43■□□□□ 0.22
CDC42EP1-201ENST00000249014 DAOP14920 347 aa16.43■□□□□ 0.22
CDC42EP1-201ENST00000249014 HOXC12P31275 282 aa16.43■□□□□ 0.22
CDC42EP1-201ENST00000249014 OR3A1P47881 315 aa16.43■□□□□ 0.22
CDC42EP1-201ENST00000249014 PRAMEF6Q5VXH4 476 aa16.43■□□□□ 0.22
CDC42EP1-201ENST00000249014 C12orf77C9JDV5 145 aa16.43■□□□□ 0.22
CDC42EP1-201ENST00000249014 SYNGR2O43760 224 aa16.43■□□□□ 0.22
CDC42EP1-201ENST00000249014 PAX6P26367 422 aa16.43■□□□□ 0.22
CDC42EP1-201ENST00000249014 TAS2R30P59541 319 aa16.43■□□□□ 0.22
CDC42EP1-201ENST00000249014 AESQ08117 197 aa16.43■□□□□ 0.22
CDC42EP1-201ENST00000249014 ZFP82Q8N141 532 aa16.43■□□□□ 0.22
CDC42EP1-201ENST00000249014 C15orf54Q8N8G6 183 aa16.43■□□□□ 0.22
CDC42EP1-201ENST00000249014 KLF2Q9Y5W3 355 aaPredicted RBP16.43■□□□□ 0.22
CDC42EP1-201ENST00000249014 CHD3Q12873 2000 aaKnown RBP16.42■□□□□ 0.22
CDC42EP1-201ENST00000249014 TMEM30CPA0ZSE6 113 aa16.42■□□□□ 0.22
CDC42EP1-201ENST00000249014 RBFOX3A6NFN3 312 aa16.42■□□□□ 0.22
CDC42EP1-201ENST00000249014 PRR33A8MZF0 331 aa16.42■□□□□ 0.22
CDC42EP1-201ENST00000249014 ARL16Q0P5N6 197 aa16.42■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 33.4 ms