RNA–Protein interactions for RNA: ENST00000243326.9

RIF1-201, Transcript of replication timing regulatory factor 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene RIF1, Length 15,003 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RIF1-201ENST00000243326 ARRDC1-AS1Q9H2J1 176 aa6.57□□□□□ -1.36
RIF1-201ENST00000243326 IGHV3-72A0A0B4J1Y9 119 aa6.57□□□□□ -1.36
RIF1-201ENST00000243326 C2CD4DB7Z1M9 353 aa6.57□□□□□ -1.36
RIF1-201ENST00000243326 KLRC4-KLRK1H3BQV0 150 aa6.57□□□□□ -1.36
RIF1-201ENST00000243326 KLF7O75840 302 aaPredicted RBP6.57□□□□□ -1.36
RIF1-201ENST00000243326 GPR6P46095 362 aaPredicted RBP6.57□□□□□ -1.36
RIF1-201ENST00000243326 GFRA1P56159 465 aa6.57□□□□□ -1.36
RIF1-201ENST00000243326 MRPL30Q8TCC3 161 aaKnown RBP6.57□□□□□ -1.36
RIF1-201ENST00000243326 TMEM74BQ9NUR3 256 aa6.57□□□□□ -1.36
RIF1-201ENST00000243326 TAAR3PQ9P1P4 343 aa6.57□□□□□ -1.36
RIF1-201ENST00000243326 SCTP09683 121 aa6.57□□□□□ -1.36
RIF1-201ENST00000243326 RHOBP62745 196 aa6.57□□□□□ -1.36
RIF1-201ENST00000243326 TINAGQ9UJW2 476 aa6.57□□□□□ -1.36
RIF1-201ENST00000243326 hADV38S2A0JD32 116 aa6.57□□□□□ -1.36
RIF1-201ENST00000243326 TSPAN2O60636 221 aa6.57□□□□□ -1.36
RIF1-201ENST00000243326 HLA-GP17693 338 aa6.57□□□□□ -1.36
RIF1-201ENST00000243326 GCSHP23434 173 aa6.57□□□□□ -1.36
RIF1-201ENST00000243326 RNFT1Q5M7Z0 435 aa6.57□□□□□ -1.36
RIF1-201ENST00000243326 DOCK1Q14185 1865 aa6.57□□□□□ -1.36
RIF1-201ENST00000243326 PMS2P1A4D2B8 440 aa6.57□□□□□ -1.36
RIF1-201ENST00000243326 PPYP01298 95 aa6.57□□□□□ -1.36
RIF1-201ENST00000243326 NPY1RP25929 384 aa6.57□□□□□ -1.36
RIF1-201ENST00000243326 DNLZQ5SXM8 178 aa6.57□□□□□ -1.36
RIF1-201ENST00000243326 VKORC1L1Q8N0U8 176 aa6.57□□□□□ -1.36
RIF1-201ENST00000243326 GABRG3Q99928 467 aa6.57□□□□□ -1.36
RIF1-201ENST00000243326 PARLQ9H300 379 aa6.57□□□□□ -1.36
RIF1-201ENST00000243326 BEX4Q9NWD9 120 aaPredicted RBP6.57□□□□□ -1.36
RIF1-201ENST00000243326 SERPINE3A8MV23 424 aa6.57□□□□□ -1.36
RIF1-201ENST00000243326 TMEM92Q6UXU6 159 aa6.57□□□□□ -1.36
RIF1-201ENST00000243326 PRSS27Q9BQR3 290 aa6.57□□□□□ -1.36
RIF1-201ENST00000243326 RAB9BQ9NP90 201 aa6.57□□□□□ -1.36
RIF1-201ENST00000243326 DHRS3O75911 302 aa6.57□□□□□ -1.36
RIF1-201ENST00000243326 CA2P00918 260 aa6.57□□□□□ -1.36
RIF1-201ENST00000243326 HYAL1Q12794 435 aa6.57□□□□□ -1.36
RIF1-201ENST00000243326 MIC13Q5XKP0 118 aa6.57□□□□□ -1.36
RIF1-201ENST00000243326 CHRDL1Q9BU40 450 aa6.56□□□□□ -1.36
RIF1-201ENST00000243326 ATAD5Q96QE3 1844 aa6.56□□□□□ -1.36
RIF1-201ENST00000243326 HRASP01112 189 aa6.56□□□□□ -1.36
RIF1-201ENST00000243326 JMJD6Q6NYC1 403 aaPredicted RBP6.56□□□□□ -1.36
RIF1-201ENST00000243326 REPIN1Q9BWE0 567 aaKnown RBP6.56□□□□□ -1.36
RIF1-201ENST00000243326 KLK15Q9H2R5 256 aa6.56□□□□□ -1.36
RIF1-201ENST00000243326 RBKSQ9H477 322 aa6.56□□□□□ -1.36
RIF1-201ENST00000243326 NDFIP1Q9BT67 221 aa6.56□□□□□ -1.36
RIF1-201ENST00000243326 MRPL18Q9H0U6 180 aaKnown RBP6.56□□□□□ -1.36
RIF1-201ENST00000243326 TAF1LQ8IZX4 1826 aa6.56□□□□□ -1.36
RIF1-201ENST00000243326 UCP3P55916 312 aa6.56□□□□□ -1.36
RIF1-201ENST00000243326 REC114Q7Z4M0 266 aa6.56□□□□□ -1.36
RIF1-201ENST00000243326 VAX2Q9UIW0 290 aa6.56□□□□□ -1.36
RIF1-201ENST00000243326 LRRC3CA6NJW4 275 aa6.56□□□□□ -1.36
RIF1-201ENST00000243326 PTP4A3O75365 173 aa6.56□□□□□ -1.36
RIF1-201ENST00000243326 SMIM17P0DL12 118 aa6.56□□□□□ -1.36
RIF1-201ENST00000243326 DEFB104AQ8WTQ1 72 aa6.56□□□□□ -1.36
RIF1-201ENST00000243326 TP53RKQ96S44 253 aa6.56□□□□□ -1.36
RIF1-201ENST00000243326 ZFYVE26Q68DK2 2539 aa6.56□□□□□ -1.36
RIF1-201ENST00000243326 FIGNL2A6NMB9 653 aa6.56□□□□□ -1.36
RIF1-201ENST00000243326 CDIPTO14735 213 aa6.56□□□□□ -1.36
RIF1-201ENST00000243326 RAMP1O60894 148 aa6.56□□□□□ -1.36
RIF1-201ENST00000243326 GLB1P16278 677 aa6.56□□□□□ -1.36
RIF1-201ENST00000243326 CBLN1P23435 193 aa6.56□□□□□ -1.36
RIF1-201ENST00000243326 MDH2P40926 338 aaKnown RBP6.56□□□□□ -1.36
RIF1-201ENST00000243326 PNLIPRP2P54317 469 aa6.56□□□□□ -1.36
RIF1-201ENST00000243326 SPCS3P61009 180 aa6.56□□□□□ -1.36
RIF1-201ENST00000243326 RND3P61587 244 aa6.56□□□□□ -1.36
RIF1-201ENST00000243326 SH2D2AQ9NP31 389 aa6.56□□□□□ -1.36
RIF1-201ENST00000243326 POLDIP2Q9Y2S7 368 aa6.56□□□□□ -1.36
RIF1-201ENST00000243326 RELBQ01201 579 aa6.56□□□□□ -1.36
RIF1-201ENST00000243326 OR1C1Q15619 314 aa6.56□□□□□ -1.36
RIF1-201ENST00000243326 NUDT16L1Q9BRJ7 211 aaKnown RBP6.56□□□□□ -1.36
RIF1-201ENST00000243326 LPAR2Q9HBW0 351 aa6.56□□□□□ -1.36
RIF1-201ENST00000243326 TUBD1Q9UJT1 453 aa6.56□□□□□ -1.36
RIF1-201ENST00000243326 CES1P1Q9UKY3 287 aa6.56□□□□□ -1.36
RIF1-201ENST00000243326 MRGPRX4Q96LA9 322 aa6.56□□□□□ -1.36
RIF1-201ENST00000243326 LYRM2Q9NU23 88 aaPredicted RBP6.56□□□□□ -1.36
RIF1-201ENST00000243326 OR2M5A3KFT3 312 aa6.56□□□□□ -1.36
RIF1-201ENST00000243326 BGLAPP02818 100 aa6.56□□□□□ -1.36
RIF1-201ENST00000243326 CTSDP07339 412 aaPredicted RBP6.56□□□□□ -1.36
RIF1-201ENST00000243326 RNASE1P07998 156 aaKnown RBP6.56□□□□□ -1.36
RIF1-201ENST00000243326 SP1P08047 785 aa6.56□□□□□ -1.36
RIF1-201ENST00000243326 IL3RAP26951 378 aa6.56□□□□□ -1.36
RIF1-201ENST00000243326 TMEM240Q5SV17 173 aa6.56□□□□□ -1.36
RIF1-201ENST00000243326 TMEM116Q8NCL8 245 aa6.56□□□□□ -1.36
RIF1-201ENST00000243326 NAA38Q9BRA0 125 aaKnown RBP6.56□□□□□ -1.36
RIF1-201ENST00000243326 IER2Q9BTL4 223 aa6.56□□□□□ -1.36
RIF1-201ENST00000243326 DNASE2O00115 360 aaPredicted RBP6.56□□□□□ -1.36
RIF1-201ENST00000243326 PIN1P1O15428 100 aa6.56□□□□□ -1.36
RIF1-201ENST00000243326 GFI1BQ5VTD9 330 aa6.56□□□□□ -1.36
RIF1-201ENST00000243326 HS3ST3A1Q9Y663 406 aa6.56□□□□□ -1.36
RIF1-201ENST00000243326 SSBP1Q04837 148 aaKnown RBP6.56□□□□□ -1.36
RIF1-201ENST00000243326 CD74P04233 296 aa6.55□□□□□ -1.36
RIF1-201ENST00000243326 GLRX5Q86SX6 157 aa6.55□□□□□ -1.36
RIF1-201ENST00000243326 RTN4RL2Q86UN3 420 aa6.55□□□□□ -1.36
RIF1-201ENST00000243326 FAHD2AQ96GK7 314 aa6.55□□□□□ -1.36
RIF1-201ENST00000243326 PROCRQ9UNN8 238 aa6.55□□□□□ -1.36
RIF1-201ENST00000243326 LSM4Q9Y4Z0 139 aaKnown RBP6.55□□□□□ -1.36
RIF1-201ENST00000243326 C7orf66A4D0T2 115 aa6.55□□□□□ -1.36
RIF1-201ENST00000243326 EXT1Q16394 746 aa6.55□□□□□ -1.36
RIF1-201ENST00000243326 ZNF260Q3ZCT1 412 aa6.55□□□□□ -1.36
RIF1-201ENST00000243326 KHDC3LQ587J8 217 aa6.55□□□□□ -1.36
RIF1-201ENST00000243326 SCGB1D4Q6XE38 83 aa6.55□□□□□ -1.36
RIF1-201ENST00000243326 SLC17A3O00476 420 aa6.55□□□□□ -1.36
Retrieved 100 of 20,778 RNA–protein pairs in 35.5 ms