RNA–Protein interactions for RNA: ENST00000238688.9

SLIRP-201, Transcript of SRA stem-loop interacting RNA binding protein, humanhuman

APPRIS P3 TSL 2 BASIC

Gene SLIRP, Length 394 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLIRP-201ENST00000238688 NKX6-3A6NJ46 265 aa11.02□□□□□ -0.65
SLIRP-201ENST00000238688 E7EQL1 145 aa11.02□□□□□ -0.65
SLIRP-201ENST00000238688 LGALS8O00214 317 aa11.02□□□□□ -0.65
SLIRP-201ENST00000238688 SPINT2O43291 252 aa11.02□□□□□ -0.65
SLIRP-201ENST00000238688 PSPNO60542 156 aa11.02□□□□□ -0.65
SLIRP-201ENST00000238688 PET100P0DJ07 73 aa11.02□□□□□ -0.65
SLIRP-201ENST00000238688 PAX1P15863 534 aa11.02□□□□□ -0.65
SLIRP-201ENST00000238688 PIGPP57054 158 aa11.02□□□□□ -0.65
SLIRP-201ENST00000238688 HTD2P86397 168 aa11.02□□□□□ -0.65
SLIRP-201ENST00000238688 COL10A1Q03692 680 aa11.02□□□□□ -0.65
SLIRP-201ENST00000238688 PDCD1Q15116 288 aa11.02□□□□□ -0.65
SLIRP-201ENST00000238688 LY6G6FQ5SQ64 297 aa11.02□□□□□ -0.65
SLIRP-201ENST00000238688 STUMQ69YW2 141 aa11.02□□□□□ -0.65
SLIRP-201ENST00000238688 Q6ZPA2 131 aa11.02□□□□□ -0.65
SLIRP-201ENST00000238688 C17orf107Q6ZR85 190 aa11.02□□□□□ -0.65
SLIRP-201ENST00000238688 NLRC3Q7RTR2 1065 aa11.02□□□□□ -0.65
SLIRP-201ENST00000238688 TCTEX1D1Q8N7M0 179 aa11.02□□□□□ -0.65
SLIRP-201ENST00000238688 OR5T2Q8NGG2 359 aa11.02□□□□□ -0.65
SLIRP-201ENST00000238688 PLPPR1Q8TBJ4 325 aa11.02□□□□□ -0.65
SLIRP-201ENST00000238688 RTN4IP1Q8WWV3 396 aaPredicted RBP11.02□□□□□ -0.65
SLIRP-201ENST00000238688 CCL19Q99731 98 aa11.02□□□□□ -0.65
SLIRP-201ENST00000238688 ZNF665Q9H7R5 613 aa11.02□□□□□ -0.65
SLIRP-201ENST00000238688 SLC2A9Q9NRM0 540 aa11.02□□□□□ -0.65
SLIRP-201ENST00000238688 FAM212BQ9NTI7 297 aaPredicted RBP11.02□□□□□ -0.65
SLIRP-201ENST00000238688 CISD1Q9NZ45 108 aaKnown RBP11.02□□□□□ -0.65
SLIRP-201ENST00000238688 COMMD9Q9P000 198 aa11.02□□□□□ -0.65
SLIRP-201ENST00000238688 PIPOXQ9P0Z9 390 aa11.02□□□□□ -0.65
SLIRP-201ENST00000238688 YLPM1P49750 1951 aaKnown RBP11.02□□□□□ -0.65
SLIRP-201ENST00000238688 IGKV1D-17A0A075B6S4 117 aa11.01□□□□□ -0.65
SLIRP-201ENST00000238688 A8MV72 311 aaPredicted RBP11.01□□□□□ -0.65
SLIRP-201ENST00000238688 HSPB6O14558 160 aa11.01□□□□□ -0.65
SLIRP-201ENST00000238688 GOSR2O14653 212 aa11.01□□□□□ -0.65
SLIRP-201ENST00000238688 ITGB1BP1O14713 200 aa11.01□□□□□ -0.65
SLIRP-201ENST00000238688 WNT9BO14905 357 aa11.01□□□□□ -0.65
SLIRP-201ENST00000238688 IFNA21P01568 189 aa11.01□□□□□ -0.65
SLIRP-201ENST00000238688 HEXAP06865 529 aa11.01□□□□□ -0.65
SLIRP-201ENST00000238688 SCTP09683 121 aa11.01□□□□□ -0.65
SLIRP-201ENST00000238688 AADACP22760 399 aa11.01□□□□□ -0.65
SLIRP-201ENST00000238688 SUPT4H1P63272 117 aaKnown RBP11.01□□□□□ -0.65
SLIRP-201ENST00000238688 ATXN7L3Q14CW9 347 aaPredicted RBP11.01□□□□□ -0.65
SLIRP-201ENST00000238688 HERPUD1Q15011 391 aa11.01□□□□□ -0.65
SLIRP-201ENST00000238688 SWI5Q1ZZU3 235 aa11.01□□□□□ -0.65
SLIRP-201ENST00000238688 IGSF11Q5DX21 431 aa11.01□□□□□ -0.65
SLIRP-201ENST00000238688 KIAA2026Q5HYC2 2103 aa11.01□□□□□ -0.65
SLIRP-201ENST00000238688 KRBOX4Q5JUW0 171 aa11.01□□□□□ -0.65
SLIRP-201ENST00000238688 PRSS57Q6UWY2 283 aa11.01□□□□□ -0.65
SLIRP-201ENST00000238688 GSG1LQ6UXU4 331 aa11.01□□□□□ -0.65
SLIRP-201ENST00000238688 Q71RC1 249 aaPredicted RBP11.01□□□□□ -0.65
SLIRP-201ENST00000238688 LDLRAD3Q86YD5 345 aa11.01□□□□□ -0.65
SLIRP-201ENST00000238688 BATF2Q8N1L9 274 aa11.01□□□□□ -0.65
SLIRP-201ENST00000238688 ASCC1Q8N9N2 400 aaKnown RBP11.01□□□□□ -0.65
SLIRP-201ENST00000238688 ADAD2Q8NCV1 583 aaKnown RBP11.01□□□□□ -0.65
SLIRP-201ENST00000238688 BVESQ8NE79 360 aa11.01□□□□□ -0.65
SLIRP-201ENST00000238688 NEUROG1Q92886 237 aa11.01□□□□□ -0.65
SLIRP-201ENST00000238688 IL22RA2Q969J5 263 aa11.01□□□□□ -0.65
SLIRP-201ENST00000238688 DMRTB1Q96MA1 342 aa11.01□□□□□ -0.65
SLIRP-201ENST00000238688 GSX2Q9BZM3 304 aa11.01□□□□□ -0.65
SLIRP-201ENST00000238688 SHARPINQ9H0F6 387 aa11.01□□□□□ -0.65
SLIRP-201ENST00000238688 JMJD1CQ15652 2540 aa11□□□□□ -0.65
SLIRP-201ENST00000238688 RNF212BA8MTL3 300 aa11□□□□□ -0.65
SLIRP-201ENST00000238688 RGS13O14921 159 aa11□□□□□ -0.65
SLIRP-201ENST00000238688 BET1O15155 118 aa11□□□□□ -0.65
SLIRP-201ENST00000238688 HSPA12AO43301 675 aa11□□□□□ -0.65
SLIRP-201ENST00000238688 GABRA2P47869 451 aa11□□□□□ -0.65
SLIRP-201ENST00000238688 LUMP51884 338 aaPredicted RBP11□□□□□ -0.65
SLIRP-201ENST00000238688 P2RX3P56373 397 aa11□□□□□ -0.65
SLIRP-201ENST00000238688 H2BFSP57053 126 aa11□□□□□ -0.65
SLIRP-201ENST00000238688 TMEM65Q6PI78 240 aa11□□□□□ -0.65
SLIRP-201ENST00000238688 ZNF788Q6ZQV5 615 aa11□□□□□ -0.65
SLIRP-201ENST00000238688 LGI3Q8N145 548 aa11□□□□□ -0.65
SLIRP-201ENST00000238688 MUC15Q8N387 334 aa11□□□□□ -0.65
SLIRP-201ENST00000238688 ZBTB8BQ8NAP8 495 aaPredicted RBP11□□□□□ -0.65
SLIRP-201ENST00000238688 OR10A7Q8NGE5 316 aa11□□□□□ -0.65
SLIRP-201ENST00000238688 EDARADDQ8WWZ3 215 aa11□□□□□ -0.65
SLIRP-201ENST00000238688 TOMM40LQ969M1 308 aa11□□□□□ -0.65
SLIRP-201ENST00000238688 PERPQ96FX8 193 aa11□□□□□ -0.65
SLIRP-201ENST00000238688 Q96MF0 132 aa11□□□□□ -0.65
SLIRP-201ENST00000238688 SLA2Q9H6Q3 261 aa11□□□□□ -0.65
SLIRP-201ENST00000238688 LINC00574Q9H8X3 128 aa11□□□□□ -0.65
SLIRP-201ENST00000238688 TAF9BQ9HBM6 251 aa11□□□□□ -0.65
SLIRP-201ENST00000238688 KIF25Q9UIL4 384 aa11□□□□□ -0.65
SLIRP-201ENST00000238688 SONP18583 2426 aaKnown RBP11□□□□□ -0.65
SLIRP-201ENST00000238688 IGKV1-6A0A0C4DH72 117 aa10.99□□□□□ -0.65
SLIRP-201ENST00000238688 ODAMA1E959 279 aa10.99□□□□□ -0.65
SLIRP-201ENST00000238688 SIGLEC5O15389 551 aa10.99□□□□□ -0.65
SLIRP-201ENST00000238688 MPPED1O15442 326 aa10.99□□□□□ -0.65
SLIRP-201ENST00000238688 DANCRP0C864 163 aa10.99□□□□□ -0.65
SLIRP-201ENST00000238688 SLC25A4P12235 298 aa10.99□□□□□ -0.65
SLIRP-201ENST00000238688 EGR1P18146 543 aa10.99□□□□□ -0.65
SLIRP-201ENST00000238688 RCC1P18754 421 aaPredicted RBP10.99□□□□□ -0.65
SLIRP-201ENST00000238688 NFYAP23511 347 aaPredicted RBP10.99□□□□□ -0.65
SLIRP-201ENST00000238688 IL2RGP31785 369 aa10.99□□□□□ -0.65
SLIRP-201ENST00000238688 MEF2CQ06413 473 aaPredicted RBP10.99□□□□□ -0.65
SLIRP-201ENST00000238688 CD177Q8N6Q3 437 aa10.99□□□□□ -0.65
SLIRP-201ENST00000238688 UXS1Q8NBZ7 420 aa10.99□□□□□ -0.65
SLIRP-201ENST00000238688 OR10V1Q8NGI7 309 aa10.99□□□□□ -0.65
SLIRP-201ENST00000238688 CASTOR1Q8WTX7 329 aa10.99□□□□□ -0.65
SLIRP-201ENST00000238688 COQ2Q96H96 371 aa10.99□□□□□ -0.65
SLIRP-201ENST00000238688 PDCD10Q9BUL8 212 aa10.99□□□□□ -0.65
SLIRP-201ENST00000238688 SLC5A7Q9GZV3 580 aa10.99□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 148.7 ms