RNA–Protein interactions for RNA: ENST00000237289.8

TNFAIP3-201, Transcript of TNF alpha induced protein 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TNFAIP3, Length 4,432 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFAIP3-201ENST00000237289 THOC7Q6I9Y2 204 aaKnown RBP9.23□□□□□ -0.93
TNFAIP3-201ENST00000237289 LIN54Q6MZP7 749 aa9.23□□□□□ -0.93
TNFAIP3-201ENST00000237289 DUX4L9Q6RFH8 374 aaPredicted RBP9.23□□□□□ -0.93
TNFAIP3-201ENST00000237289 OR56B4Q8NH76 319 aa9.23□□□□□ -0.93
TNFAIP3-201ENST00000237289 MRPL30Q8TCC3 161 aaKnown RBP9.23□□□□□ -0.93
TNFAIP3-201ENST00000237289 SHARPINQ9H0F6 387 aa9.23□□□□□ -0.93
TNFAIP3-201ENST00000237289 IFT22Q9H7X7 185 aa9.23□□□□□ -0.93
TNFAIP3-201ENST00000237289 DUX4Q9UBX2 424 aa9.23□□□□□ -0.93
TNFAIP3-201ENST00000237289 IGHV3OR16-10A0A075B7F0 116 aa9.23□□□□□ -0.93
TNFAIP3-201ENST00000237289 C12orf77C9JDV5 145 aa9.23□□□□□ -0.93
TNFAIP3-201ENST00000237289 ZNF737O75373 536 aa9.23□□□□□ -0.93
TNFAIP3-201ENST00000237289 SERPINE2P07093 398 aa9.23□□□□□ -0.93
TNFAIP3-201ENST00000237289 SIGIRRQ6IA17 410 aa9.23□□□□□ -0.93
TNFAIP3-201ENST00000237289 SGPP2Q8IWX5 399 aa9.23□□□□□ -0.93
TNFAIP3-201ENST00000237289 ARRDC1Q8N5I2 433 aa9.23□□□□□ -0.93
TNFAIP3-201ENST00000237289 Q8NFD4 153 aa9.23□□□□□ -0.93
TNFAIP3-201ENST00000237289 OR9G1Q8NH87 305 aa9.23□□□□□ -0.93
TNFAIP3-201ENST00000237289 NANPQ8TBE9 248 aa9.23□□□□□ -0.93
TNFAIP3-201ENST00000237289 RCC2Q9P258 522 aaKnown RBP9.23□□□□□ -0.93
TNFAIP3-201ENST00000237289 SESN1Q9Y6P5 492 aa9.23□□□□□ -0.93
TNFAIP3-201ENST00000237289 S100A1P23297 94 aa9.22□□□□□ -0.93
TNFAIP3-201ENST00000237289 TMEM249Q2WGJ8 235 aa9.22□□□□□ -0.93
TNFAIP3-201ENST00000237289 OR51S1Q8NGJ8 323 aa9.22□□□□□ -0.93
TNFAIP3-201ENST00000237289 OPN4Q9UHM6 478 aa9.22□□□□□ -0.93
TNFAIP3-201ENST00000237289 ZNF222Q9UK12 451 aa9.22□□□□□ -0.93
TNFAIP3-201ENST00000237289 DYSFO75923 2080 aa9.22□□□□□ -0.93
TNFAIP3-201ENST00000237289 PRRC2AP48634 2157 aaKnown RBP9.22□□□□□ -0.93
TNFAIP3-201ENST00000237289 A0A1W2PPE3 182 aa9.22□□□□□ -0.93
TNFAIP3-201ENST00000237289 POM121CA8CG34 1229 aa9.22□□□□□ -0.93
TNFAIP3-201ENST00000237289 BRS3P32247 399 aa9.22□□□□□ -0.93
TNFAIP3-201ENST00000237289 PLA1AQ53H76 456 aa9.22□□□□□ -0.93
TNFAIP3-201ENST00000237289 CASTOR1Q8WTX7 329 aa9.22□□□□□ -0.93
TNFAIP3-201ENST00000237289 TMPRSS13Q9BYE2 586 aa9.22□□□□□ -0.93
TNFAIP3-201ENST00000237289 CTSZQ9UBR2 303 aa9.22□□□□□ -0.93
TNFAIP3-201ENST00000237289 JPT1Q9UK76 154 aa9.22□□□□□ -0.93
TNFAIP3-201ENST00000237289 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP9.22□□□□□ -0.933e-7■■■■■ 28.2
TNFAIP3-201ENST00000237289 TRAV6A0A075B6T7 132 aa9.22□□□□□ -0.93
TNFAIP3-201ENST00000237289 TSPAN9O75954 239 aa9.22□□□□□ -0.93
TNFAIP3-201ENST00000237289 ACTL6BO94805 426 aa9.22□□□□□ -0.93
TNFAIP3-201ENST00000237289 ATG12O94817 140 aa9.22□□□□□ -0.93
TNFAIP3-201ENST00000237289 CD99P14209 185 aa9.22□□□□□ -0.93
TNFAIP3-201ENST00000237289 ABHD5Q8WTS1 349 aa9.22□□□□□ -0.93
TNFAIP3-201ENST00000237289 TCTEX1D2Q8WW35 142 aa9.22□□□□□ -0.93
TNFAIP3-201ENST00000237289 KPTNQ9Y664 436 aa9.22□□□□□ -0.93
TNFAIP3-201ENST00000237289 CSPG4Q6UVK1 2322 aa9.22□□□□□ -0.93
TNFAIP3-201ENST00000237289 PIGBOS1A0A0B4J2F0 54 aa9.21□□□□□ -0.93
TNFAIP3-201ENST00000237289 SSNA1O43805 119 aa9.21□□□□□ -0.93
TNFAIP3-201ENST00000237289 MELTFP08582 738 aa9.21□□□□□ -0.93
TNFAIP3-201ENST00000237289 HTR1DP28221 377 aa9.21□□□□□ -0.93
TNFAIP3-201ENST00000237289 ERVK-16P61578 105 aa9.21□□□□□ -0.93
TNFAIP3-201ENST00000237289 ZNF273Q14593 569 aa9.21□□□□□ -0.93
TNFAIP3-201ENST00000237289 IGSF11Q5DX21 431 aa9.21□□□□□ -0.93
TNFAIP3-201ENST00000237289 COQ2Q96H96 371 aa9.21□□□□□ -0.93
TNFAIP3-201ENST00000237289 TINAGL1Q9GZM7 467 aaPredicted RBP9.21□□□□□ -0.93
TNFAIP3-201ENST00000237289 OR2D2Q9H210 308 aa9.21□□□□□ -0.93
TNFAIP3-201ENST00000237289 ZNF581Q9P0T4 197 aa9.21□□□□□ -0.93
TNFAIP3-201ENST00000237289 PIPOXQ9P0Z9 390 aa9.21□□□□□ -0.93
TNFAIP3-201ENST00000237289 KMT2BQ9UMN6 2715 aaPredicted RBP9.21□□□□□ -0.93
TNFAIP3-201ENST00000237289 M0R1X1 148 aa9.21□□□□□ -0.93
TNFAIP3-201ENST00000237289 PEX14O75381 377 aa9.21□□□□□ -0.93
TNFAIP3-201ENST00000237289 LOXL1Q08397 574 aaPredicted RBP9.21□□□□□ -0.93
TNFAIP3-201ENST00000237289 PHLDA2Q53GA4 152 aa9.21□□□□□ -0.93
TNFAIP3-201ENST00000237289 CCDC144NLQ6NUI1 221 aa9.21□□□□□ -0.93
TNFAIP3-201ENST00000237289 CENPSQ8N2Z9 138 aa9.21□□□□□ -0.93
TNFAIP3-201ENST00000237289 ABHD14AQ9BUJ0 271 aa9.21□□□□□ -0.93
TNFAIP3-201ENST00000237289 SEBOXQ9HB31 216 aaPredicted RBP9.21□□□□□ -0.93
TNFAIP3-201ENST00000237289 BEX1Q9HBH7 125 aa9.21□□□□□ -0.93
TNFAIP3-201ENST00000237289 M0R1W7 72 aa9.21□□□□□ -0.94
TNFAIP3-201ENST00000237289 GSTZ1O43708 216 aaPredicted RBP9.21□□□□□ -0.94
TNFAIP3-201ENST00000237289 RBMS2Q15434 407 aaKnown RBP9.21□□□□□ -0.94
TNFAIP3-201ENST00000237289 FAAP20Q6NZ36 180 aa9.21□□□□□ -0.94
TNFAIP3-201ENST00000237289 SLC25A21Q9BQT8 299 aaPredicted RBP9.21□□□□□ -0.94
TNFAIP3-201ENST00000237289 AKIP1Q9NQ31 210 aa9.21□□□□□ -0.94
TNFAIP3-201ENST00000237289 INSIG2Q9Y5U4 225 aa9.21□□□□□ -0.94
TNFAIP3-201ENST00000237289 TAS2R31P59538 309 aa9.21□□□□□ -0.94
TNFAIP3-201ENST00000237289 DYRK1AQ13627 763 aa9.21□□□□□ -0.94
TNFAIP3-201ENST00000237289 TGIF2LXQ8IUE1 241 aa9.21□□□□□ -0.94
TNFAIP3-201ENST00000237289 OR4C16Q8NGL9 310 aa9.21□□□□□ -0.94
TNFAIP3-201ENST00000237289 LEAP2Q969E1 77 aa9.21□□□□□ -0.94
TNFAIP3-201ENST00000237289 PRELID1Q9Y255 219 aa9.21□□□□□ -0.94
TNFAIP3-201ENST00000237289 POLQO75417 2590 aa9.2□□□□□ -0.94
TNFAIP3-201ENST00000237289 IGHV2-70DA0A0C4DH43 119 aa9.2□□□□□ -0.94
TNFAIP3-201ENST00000237289 FAM25EA8MYX2 175 aa9.2□□□□□ -0.94
TNFAIP3-201ENST00000237289 LEUTXA8MZ59 168 aa9.2□□□□□ -0.94
TNFAIP3-201ENST00000237289 AKR1C2P52895 323 aa9.2□□□□□ -0.94
TNFAIP3-201ENST00000237289 RTL8BQ17RB0 113 aa9.2□□□□□ -0.94
TNFAIP3-201ENST00000237289 LYPD6Q86Y78 171 aa9.2□□□□□ -0.94
TNFAIP3-201ENST00000237289 TERB2Q8NHR7 220 aa9.2□□□□□ -0.94
TNFAIP3-201ENST00000237289 RRNAD1Q96FB5 475 aaKnown RBP9.2□□□□□ -0.94
TNFAIP3-201ENST00000237289 CLCC1Q96S66 551 aa9.2□□□□□ -0.94
TNFAIP3-201ENST00000237289 HRASLSQ9HDD0 168 aa9.2□□□□□ -0.94
TNFAIP3-201ENST00000237289 ZNF107Q9UII5 783 aaPredicted RBP9.2□□□□□ -0.94
TNFAIP3-201ENST00000237289 OR2W1Q9Y3N9 320 aa9.2□□□□□ -0.94
TNFAIP3-201ENST00000237289 HILPDAQ9Y5L2 63 aa9.2□□□□□ -0.94
TNFAIP3-201ENST00000237289 V9GYH0 126 aa9.2□□□□□ -0.94
TNFAIP3-201ENST00000237289 A8MV72 311 aaPredicted RBP9.2□□□□□ -0.94
TNFAIP3-201ENST00000237289 FSTL3O95633 263 aa9.2□□□□□ -0.94
TNFAIP3-201ENST00000237289 IFNA21P01568 189 aa9.2□□□□□ -0.94
TNFAIP3-201ENST00000237289 INHBBP09529 407 aa9.2□□□□□ -0.94
TNFAIP3-201ENST00000237289 H2AFB2P0C5Z0 115 aa9.2□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 33.5 ms