RNA–Protein interactions for RNA: ENST00000236671.6

CTSD-201, Transcript of cathepsin D, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene CTSD, Length 2,123 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSD-201ENST00000236671 TRAV24A0A0B4J272 114 aa13.21□□□□□ -0.29
CTSD-201ENST00000236671 H3BP45 60 aa13.21□□□□□ -0.29
CTSD-201ENST00000236671 HBE1P02100 147 aa13.21□□□□□ -0.29
CTSD-201ENST00000236671 CELA3AP09093 270 aa13.21□□□□□ -0.29
CTSD-201ENST00000236671 CLDN18P56856 261 aa13.21□□□□□ -0.29
CTSD-201ENST00000236671 ZNF343Q6P1L6 599 aa13.21□□□□□ -0.29
CTSD-201ENST00000236671 ZNF880Q6PDB4 577 aa13.21□□□□□ -0.29
CTSD-201ENST00000236671 TIPARPQ7Z3E1 657 aaKnown RBP13.21□□□□□ -0.29
CTSD-201ENST00000236671 STX12Q86Y82 276 aa13.21□□□□□ -0.29
CTSD-201ENST00000236671 H1FOOQ8IZA3 346 aaPredicted RBP13.21□□□□□ -0.29
CTSD-201ENST00000236671 Q8WTZ3 238 aa13.21□□□□□ -0.29
CTSD-201ENST00000236671 OR5P3Q8WZ94 311 aa13.21□□□□□ -0.29
CTSD-201ENST00000236671 TVP23CQ96ET8 276 aa13.21□□□□□ -0.29
CTSD-201ENST00000236671 TMPRSS5Q9H3S3 457 aa13.21□□□□□ -0.29
CTSD-201ENST00000236671 ZNF703Q9H7S9 590 aaPredicted RBP13.21□□□□□ -0.29
CTSD-201ENST00000236671 MIOXQ9UGB7 285 aa13.21□□□□□ -0.29
CTSD-201ENST00000236671 EPG5Q9HCE0 2579 aa13.21□□□□□ -0.29
CTSD-201ENST00000236671 FREM1Q5H8C1 2179 aa13.21□□□□□ -0.3
CTSD-201ENST00000236671 A0A1B0GU03 582 aa13.21□□□□□ -0.3
CTSD-201ENST00000236671 CD300LBA8K4G0 201 aa13.21□□□□□ -0.3
CTSD-201ENST00000236671 DFFBO76075 338 aa13.21□□□□□ -0.3
CTSD-201ENST00000236671 CXCL1P09341 107 aa13.21□□□□□ -0.3
CTSD-201ENST00000236671 SLC25A6P12236 298 aa13.21□□□□□ -0.3
CTSD-201ENST00000236671 HLA-DRB3P79483 266 aa13.21□□□□□ -0.3
CTSD-201ENST00000236671 KIAA0141Q14154 515 aaPredicted RBP13.21□□□□□ -0.3
CTSD-201ENST00000236671 POM121L2Q96KW2 1035 aa13.21□□□□□ -0.3
CTSD-201ENST00000236671 CABLES2Q9BTV7 478 aa13.21□□□□□ -0.3
CTSD-201ENST00000236671 PLK3Q9H4B4 646 aa13.21□□□□□ -0.3
CTSD-201ENST00000236671 ASCL3Q9NQ33 180 aa13.21□□□□□ -0.3
CTSD-201ENST00000236671 LRFN1Q9P244 771 aa13.21□□□□□ -0.3
CTSD-201ENST00000236671 USP24Q9UPU5 2620 aa13.2□□□□□ -0.3
CTSD-201ENST00000236671 TRAV1-1A0A0B4J248 108 aa13.2□□□□□ -0.3
CTSD-201ENST00000236671 LOC102723971A0A1B0GUV8 181 aa13.2□□□□□ -0.3
CTSD-201ENST00000236671 HS3ST1O14792 307 aa13.2□□□□□ -0.3
CTSD-201ENST00000236671 LILRA1O75019 489 aa13.2□□□□□ -0.3
CTSD-201ENST00000236671 WNT2P09544 360 aa13.2□□□□□ -0.3
CTSD-201ENST00000236671 PSG2P11465 335 aa13.2□□□□□ -0.3
CTSD-201ENST00000236671 RPL23AP62750 156 aaKnown RBP13.2□□□□□ -0.3
CTSD-201ENST00000236671 TMEM267Q0VDI3 215 aaPredicted RBP13.2□□□□□ -0.3
CTSD-201ENST00000236671 SSPNQ14714 243 aa13.2□□□□□ -0.3
CTSD-201ENST00000236671 KHDC3LQ587J8 217 aa13.2□□□□□ -0.3
CTSD-201ENST00000236671 DCAF12Q5T6F0 453 aa13.2□□□□□ -0.3
CTSD-201ENST00000236671 THNSL2Q86YJ6 484 aa13.2□□□□□ -0.3
CTSD-201ENST00000236671 OR51H1Q8NH63 302 aa13.2□□□□□ -0.3
CTSD-201ENST00000236671 OR10J5Q8NHC4 309 aa13.2□□□□□ -0.3
CTSD-201ENST00000236671 HIST1H2AAQ96QV6 131 aa13.2□□□□□ -0.3
CTSD-201ENST00000236671 NIPSNAP3BQ9BS92 247 aa13.2□□□□□ -0.3
CTSD-201ENST00000236671 C3orf80F5H4A9 247 aa13.19□□□□□ -0.3
CTSD-201ENST00000236671 HOXA5P20719 270 aa13.19□□□□□ -0.3
CTSD-201ENST00000236671 S100GP29377 79 aa13.19□□□□□ -0.3
CTSD-201ENST00000236671 ERVFRD-1P60508 538 aa13.19□□□□□ -0.3
CTSD-201ENST00000236671 RAB2AP61019 212 aa13.19□□□□□ -0.3
CTSD-201ENST00000236671 IZUMO4Q1ZYL8 232 aa13.19□□□□□ -0.3
CTSD-201ENST00000236671 Q6ZRM9 215 aa13.19□□□□□ -0.3
CTSD-201ENST00000236671 SLC35E3Q7Z769 313 aa13.19□□□□□ -0.3
CTSD-201ENST00000236671 OR2M7Q8NG81 312 aa13.19□□□□□ -0.3
CTSD-201ENST00000236671 OR10G4Q8NGN3 311 aa13.19□□□□□ -0.3
CTSD-201ENST00000236671 RDH5Q92781 318 aa13.19□□□□□ -0.3
CTSD-201ENST00000236671 RAB40CQ96S21 281 aa13.19□□□□□ -0.3
CTSD-201ENST00000236671 CXorf65A6NEN9 183 aa13.19□□□□□ -0.3
CTSD-201ENST00000236671 IFITM10A6NMD0 228 aa13.19□□□□□ -0.3
CTSD-201ENST00000236671 ATXN7O15265 892 aaPredicted RBP13.19□□□□□ -0.3
CTSD-201ENST00000236671 NEURL1O76050 574 aa13.19□□□□□ -0.3
CTSD-201ENST00000236671 YIF1AO95070 293 aa13.19□□□□□ -0.3
CTSD-201ENST00000236671 SERPINE2P07093 398 aa13.19□□□□□ -0.3
CTSD-201ENST00000236671 S100PP25815 95 aa13.19□□□□□ -0.3
CTSD-201ENST00000236671 C6orf15Q6UXA7 325 aaPredicted RBP13.19□□□□□ -0.3
CTSD-201ENST00000236671 P4HA3Q7Z4N8 544 aa13.19□□□□□ -0.3
CTSD-201ENST00000236671 C17orf78Q8N4C9 275 aa13.19□□□□□ -0.3
CTSD-201ENST00000236671 SIRT7Q9NRC8 400 aa13.19□□□□□ -0.3
CTSD-201ENST00000236671 OR1A1Q9P1Q5 309 aa13.19□□□□□ -0.3
CTSD-201ENST00000236671 ERRFI1Q9UJM3 462 aaPredicted RBP13.19□□□□□ -0.3
CTSD-201ENST00000236671 KALRNO60229 2985 aa13.18□□□□□ -0.3
CTSD-201ENST00000236671 C1QTNF9BB2RNN3 333 aa13.18□□□□□ -0.3
CTSD-201ENST00000236671 IFNA5P01569 189 aa13.18□□□□□ -0.3
CTSD-201ENST00000236671 IGKV1-39P01597 117 aa13.18□□□□□ -0.3
CTSD-201ENST00000236671 IGLV2-14P01704 120 aa13.18□□□□□ -0.3
CTSD-201ENST00000236671 IGHV2-70P01814 119 aa13.18□□□□□ -0.3
CTSD-201ENST00000236671 IGKV1D-39P04432 117 aa13.18□□□□□ -0.3
CTSD-201ENST00000236671 C1QTNF9P0C862 333 aa13.18□□□□□ -0.3
CTSD-201ENST00000236671 GLIPR1P48060 266 aa13.18□□□□□ -0.3
CTSD-201ENST00000236671 FAM58AQ8N1B3 248 aa13.18□□□□□ -0.3
CTSD-201ENST00000236671 EDARADDQ8WWZ3 215 aa13.18□□□□□ -0.3
CTSD-201ENST00000236671 FAM173AQ9BQD7 235 aa13.18□□□□□ -0.3
CTSD-201ENST00000236671 HES7Q9BYE0 225 aa13.18□□□□□ -0.3
CTSD-201ENST00000236671 OPA3Q9H6K4 179 aa13.18□□□□□ -0.3
CTSD-201ENST00000236671 CACNA1GO43497 2377 aa13.18□□□□□ -0.3
CTSD-201ENST00000236671 PKD1L2Q7Z442 2459 aa13.18□□□□□ -0.3
CTSD-201ENST00000236671 OR5B21A6NL26 309 aa13.18□□□□□ -0.3
CTSD-201ENST00000236671 NPIPB11E5RHQ5 1161 aa13.18□□□□□ -0.3
CTSD-201ENST00000236671 DEGS1O15121 323 aa13.18□□□□□ -0.3
CTSD-201ENST00000236671 CNOT4O95628 575 aaKnown RBP13.18□□□□□ -0.3
CTSD-201ENST00000236671 ARR3P36575 388 aa13.18□□□□□ -0.3
CTSD-201ENST00000236671 ZNF573Q86YE8 665 aa13.18□□□□□ -0.3
CTSD-201ENST00000236671 THOC3Q96J01 351 aaKnown RBP13.18□□□□□ -0.3
CTSD-201ENST00000236671 RSG1Q9BU20 258 aa13.18□□□□□ -0.3
CTSD-201ENST00000236671 CACNG5Q9UF02 275 aa13.18□□□□□ -0.3
CTSD-201ENST00000236671 URGCP-MRPS24S4R325 110 aa13.18□□□□□ -0.3
CTSD-201ENST00000236671 DOCK10Q96BY6 2186 aa13.18□□□□□ -0.3
CTSD-201ENST00000236671 ZNF407Q9C0G0 2248 aa13.18□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 47.5 ms