RNA–Protein interactions for RNA: ENST00000233468.4

SF3B6-201, Transcript of splicing factor 3b subunit 6, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SF3B6, Length 770 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B6-201ENST00000233468 BRS3P32247 399 aa9.14□□□□□ -0.95
SF3B6-201ENST00000233468 MNDAP41218 407 aa9.14□□□□□ -0.95
SF3B6-201ENST00000233468 ALDH3B2P48448 385 aa9.14□□□□□ -0.95
SF3B6-201ENST00000233468 TMEM50BP56557 158 aa9.14□□□□□ -0.95
SF3B6-201ENST00000233468 HTD2P86397 168 aa9.14□□□□□ -0.95
SF3B6-201ENST00000233468 PITPNAQ00169 270 aa9.14□□□□□ -0.95
SF3B6-201ENST00000233468 MADCAM1Q13477 382 aa9.14□□□□□ -0.95
SF3B6-201ENST00000233468 SSX2Q16385 188 aa9.14□□□□□ -0.95
SF3B6-201ENST00000233468 HLA-DRB5Q30154 266 aa9.14□□□□□ -0.95
SF3B6-201ENST00000233468 OR4P4Q8NGL7 312 aa9.14□□□□□ -0.95
SF3B6-201ENST00000233468 LGALS14Q8TCE9 139 aa9.14□□□□□ -0.95
SF3B6-201ENST00000233468 AP3S1Q92572 193 aa9.14□□□□□ -0.95
SF3B6-201ENST00000233468 GCDHQ92947 438 aaPredicted RBP9.14□□□□□ -0.95
SF3B6-201ENST00000233468 SLC25A46Q96AG3 418 aa9.14□□□□□ -0.95
SF3B6-201ENST00000233468 RPEQ96AT9 228 aa9.14□□□□□ -0.95
SF3B6-201ENST00000233468 ZNF286AQ9HBT8 521 aa9.14□□□□□ -0.95
SF3B6-201ENST00000233468 OR2S2Q9NQN1 319 aa9.14□□□□□ -0.95
SF3B6-201ENST00000233468 DIABLOQ9NR28 239 aa9.14□□□□□ -0.95
SF3B6-201ENST00000233468 RHBDL2Q9NX52 303 aa9.14□□□□□ -0.95
SF3B6-201ENST00000233468 GFOD1Q9NXC2 390 aa9.14□□□□□ -0.95
SF3B6-201ENST00000233468 AK3Q9UIJ7 227 aa9.14□□□□□ -0.95
SF3B6-201ENST00000233468 JPT1Q9UK76 154 aa9.14□□□□□ -0.95
SF3B6-201ENST00000233468 VPREB3Q9UKI3 123 aa9.14□□□□□ -0.95
SF3B6-201ENST00000233468 SPATA2Q9UM82 520 aa9.14□□□□□ -0.95
SF3B6-201ENST00000233468 PSG11Q9UQ72 335 aa9.14□□□□□ -0.95
SF3B6-201ENST00000233468 DOCK11Q5JSL3 2073 aa9.14□□□□□ -0.95
SF3B6-201ENST00000233468 A0A0B4J203 849 aa9.13□□□□□ -0.95
SF3B6-201ENST00000233468 TMEM89A2RUT3 159 aa9.13□□□□□ -0.95
SF3B6-201ENST00000233468 BUB1B-PAK6H3BSN5 160 aa9.13□□□□□ -0.95
SF3B6-201ENST00000233468 RAB27BO00194 218 aa9.13□□□□□ -0.95
SF3B6-201ENST00000233468 GABARAPO95166 117 aa9.13□□□□□ -0.95
SF3B6-201ENST00000233468 IGHV4-59P01825 116 aa9.13□□□□□ -0.95
SF3B6-201ENST00000233468 TFAP2AP05549 437 aa9.13□□□□□ -0.95
SF3B6-201ENST00000233468 GSTP1P09211 210 aaKnown RBP9.13□□□□□ -0.95
SF3B6-201ENST00000233468 RPS19P39019 145 aaKnown RBP9.13□□□□□ -0.95
SF3B6-201ENST00000233468 GDNFP39905 211 aa9.13□□□□□ -0.95
SF3B6-201ENST00000233468 KIR2DS4P43632 304 aa9.13□□□□□ -0.95
SF3B6-201ENST00000233468 RORCP51449 518 aa9.13□□□□□ -0.95
SF3B6-201ENST00000233468 DYNLT3P51808 116 aa9.13□□□□□ -0.95
SF3B6-201ENST00000233468 EFNB2P52799 333 aa9.13□□□□□ -0.95
SF3B6-201ENST00000233468 VBP1P61758 197 aa9.13□□□□□ -0.95
SF3B6-201ENST00000233468 FOXL1Q12952 345 aa9.13□□□□□ -0.95
SF3B6-201ENST00000233468 ARFRP1Q13795 201 aa9.13□□□□□ -0.95
SF3B6-201ENST00000233468 KIR2DS1Q14954 304 aa9.13□□□□□ -0.95
SF3B6-201ENST00000233468 HMGN3Q15651 99 aa9.13□□□□□ -0.95
SF3B6-201ENST00000233468 PLAC9Q5JTB6 97 aa9.13□□□□□ -0.95
SF3B6-201ENST00000233468 GPR107Q5VW38 600 aa9.13□□□□□ -0.95
SF3B6-201ENST00000233468 ZNF880Q6PDB4 577 aa9.13□□□□□ -0.95
SF3B6-201ENST00000233468 LHFPL4Q7Z7J7 247 aa9.13□□□□□ -0.95
SF3B6-201ENST00000233468 LINC00311Q8N616 119 aa9.13□□□□□ -0.95
SF3B6-201ENST00000233468 C3orf56Q8N813 242 aa9.13□□□□□ -0.95
SF3B6-201ENST00000233468 ACOT12Q8WYK0 555 aa9.13□□□□□ -0.95
SF3B6-201ENST00000233468 S100A16Q96FQ6 103 aaKnown RBP9.13□□□□□ -0.95
SF3B6-201ENST00000233468 DUX5Q96PT3 197 aa9.13□□□□□ -0.95
SF3B6-201ENST00000233468 BCL7BQ9BQE9 202 aa9.13□□□□□ -0.95
SF3B6-201ENST00000233468 TNFRSF19Q9NS68 423 aa9.13□□□□□ -0.95
SF3B6-201ENST00000233468 HILPDAQ9Y5L2 63 aa9.13□□□□□ -0.95
SF3B6-201ENST00000233468 A0A075B6Q4 140 aa9.12□□□□□ -0.95
SF3B6-201ENST00000233468 FAM172BPA6NC97 362 aa9.12□□□□□ -0.95
SF3B6-201ENST00000233468 H3BUX3 64 aa9.12□□□□□ -0.95
SF3B6-201ENST00000233468 GNB3P16520 340 aa9.12□□□□□ -0.95
SF3B6-201ENST00000233468 SOX6P35712 828 aa9.12□□□□□ -0.95
SF3B6-201ENST00000233468 COMPP49747 757 aaPredicted RBP9.12□□□□□ -0.95
SF3B6-201ENST00000233468 GNG10P50151 68 aa9.12□□□□□ -0.95
SF3B6-201ENST00000233468 RAB7AP51149 207 aa9.12□□□□□ -0.95
SF3B6-201ENST00000233468 LOXL3P58215 753 aa9.12□□□□□ -0.95
SF3B6-201ENST00000233468 NCS1P62166 190 aa9.12□□□□□ -0.95
SF3B6-201ENST00000233468 SRSF7Q16629 238 aaKnown RBP eCLIP9.12□□□□□ -0.95
SF3B6-201ENST00000233468 PNLIPRP3Q17RR3 467 aa9.12□□□□□ -0.95
SF3B6-201ENST00000233468 CDNFQ49AH0 187 aa9.12□□□□□ -0.95
SF3B6-201ENST00000233468 LY6G6FQ5SQ64 297 aa9.12□□□□□ -0.95
SF3B6-201ENST00000233468 TPTE2P1Q5T6R2 138 aa9.12□□□□□ -0.95
SF3B6-201ENST00000233468 MZT2AQ6P582 158 aa9.12□□□□□ -0.95
SF3B6-201ENST00000233468 OR1L1Q8NH94 360 aa9.12□□□□□ -0.95
SF3B6-201ENST00000233468 RAB2BQ8WUD1 216 aa9.12□□□□□ -0.95
SF3B6-201ENST00000233468 CAPSLQ8WWF8 208 aa9.12□□□□□ -0.95
SF3B6-201ENST00000233468 TOMM40LQ969M1 308 aa9.12□□□□□ -0.95
SF3B6-201ENST00000233468 CMTM3Q96MX0 182 aa9.12□□□□□ -0.95
SF3B6-201ENST00000233468 CHIAQ9BZP6 476 aa9.12□□□□□ -0.95
SF3B6-201ENST00000233468 GHITMQ9H3K2 345 aa9.12□□□□□ -0.95
SF3B6-201ENST00000233468 Q9N2K0 584 aa9.12□□□□□ -0.95
SF3B6-201ENST00000233468 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP9.12□□□□□ -0.95
SF3B6-201ENST00000233468 A0A1B0GUS0 222 aa9.11□□□□□ -0.95
SF3B6-201ENST00000233468 SMIM31A0A1B0GVY4 71 aa9.11□□□□□ -0.95
SF3B6-201ENST00000233468 TRDCB7Z8K6 153 aa9.11□□□□□ -0.95
SF3B6-201ENST00000233468 MFNGO00587 321 aa9.11□□□□□ -0.95
SF3B6-201ENST00000233468 HSPA12AO43301 675 aa9.11□□□□□ -0.95
SF3B6-201ENST00000233468 TXNL1O43396 289 aa9.11□□□□□ -0.95
SF3B6-201ENST00000233468 YPEL1O60688 119 aa9.11□□□□□ -0.95
SF3B6-201ENST00000233468 DIRAS3O95661 229 aa9.11□□□□□ -0.95
SF3B6-201ENST00000233468 GAPDHP04406 335 aaKnown RBP9.11□□□□□ -0.95
SF3B6-201ENST00000233468 HKR1P10072 659 aa9.11□□□□□ -0.95
SF3B6-201ENST00000233468 DTYMKP23919 212 aa9.11□□□□□ -0.95
SF3B6-201ENST00000233468 ZBTB25P24278 435 aa9.11□□□□□ -0.95
SF3B6-201ENST00000233468 TMBIM6P55061 237 aa9.11□□□□□ -0.95
SF3B6-201ENST00000233468 GNG2P59768 71 aa9.11□□□□□ -0.95
SF3B6-201ENST00000233468 HLA-DRB3P79483 266 aa9.11□□□□□ -0.95
SF3B6-201ENST00000233468 PLA2G7Q13093 441 aa9.11□□□□□ -0.95
SF3B6-201ENST00000233468 MOGAT2Q3SYC2 334 aa9.11□□□□□ -0.95
SF3B6-201ENST00000233468 UBE2NLQ5JXB2 153 aa9.11□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 33.4 ms