RNA–Protein interactions for RNA: ENST00000183605.9

CLDN18-201, Transcript of claudin 18, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene CLDN18, Length 3,520 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN18-201ENST00000183605 ERRFI1Q9UJM3 462 aaPredicted RBP8.66□□□□□ -1.02
CLDN18-201ENST00000183605 LAMA2P24043 3122 aaKnown RBP8.66□□□□□ -1.02
CLDN18-201ENST00000183605 KNTC1P50748 2209 aa8.66□□□□□ -1.02
CLDN18-201ENST00000183605 SDK2Q58EX2 2172 aa8.66□□□□□ -1.02
CLDN18-201ENST00000183605 PIGBOS1A0A0B4J2F0 54 aa8.66□□□□□ -1.02
CLDN18-201ENST00000183605 IGHV5-51A0A0C4DH38 117 aa8.66□□□□□ -1.02
CLDN18-201ENST00000183605 TMEM250H0YL14 139 aa8.66□□□□□ -1.02
CLDN18-201ENST00000183605 HS3ST1O14792 307 aa8.66□□□□□ -1.02
CLDN18-201ENST00000183605 NDUFB4O95168 129 aa8.66□□□□□ -1.02
CLDN18-201ENST00000183605 SEMA4FO95754 770 aa8.66□□□□□ -1.02
CLDN18-201ENST00000183605 PATE4P0C8F1 98 aa8.66□□□□□ -1.02
CLDN18-201ENST00000183605 PSG2P11465 335 aa8.66□□□□□ -1.02
CLDN18-201ENST00000183605 ANOS1P23352 680 aa8.66□□□□□ -1.02
CLDN18-201ENST00000183605 YPEL5P62699 121 aa8.66□□□□□ -1.02
CLDN18-201ENST00000183605 ATP6V1FQ16864 119 aa8.66□□□□□ -1.02
CLDN18-201ENST00000183605 DEFB119Q8N690 84 aa8.66□□□□□ -1.02
CLDN18-201ENST00000183605 ADPRHL1Q8NDY3 354 aa8.66□□□□□ -1.02
CLDN18-201ENST00000183605 OR1L6Q8NGR2 347 aa8.66□□□□□ -1.02
CLDN18-201ENST00000183605 TAF15Q92804 592 aaKnown RBP eCLIP8.66□□□□□ -1.02
CLDN18-201ENST00000183605 WDYHV1Q96HA8 205 aa8.66□□□□□ -1.02
CLDN18-201ENST00000183605 LYZL4Q96KX0 146 aa8.66□□□□□ -1.02
CLDN18-201ENST00000183605 KIR2DL5BA0A0G2JN68 375 aa8.66□□□□□ -1.02
CLDN18-201ENST00000183605 KIR2DL5BA0A0G2JPC4 375 aa8.66□□□□□ -1.02
CLDN18-201ENST00000183605 C1QTNF9BB2RNN3 333 aa8.66□□□□□ -1.02
CLDN18-201ENST00000183605 ZNF814B7Z6K7 855 aa8.66□□□□□ -1.02
CLDN18-201ENST00000183605 E9PLN8 166 aa8.66□□□□□ -1.02
CLDN18-201ENST00000183605 SERF1AO75920 110 aa8.66□□□□□ -1.02
CLDN18-201ENST00000183605 KRASP01116 189 aa8.66□□□□□ -1.02
CLDN18-201ENST00000183605 IER3P46695 156 aa8.66□□□□□ -1.02
CLDN18-201ENST00000183605 ERASQ7Z444 233 aa8.66□□□□□ -1.02
CLDN18-201ENST00000183605 ATOH7Q8N100 152 aa8.66□□□□□ -1.02
CLDN18-201ENST00000183605 KIR2DL5AQ8N109 375 aa8.66□□□□□ -1.02
CLDN18-201ENST00000183605 OR4B1Q8NGF8 309 aa8.66□□□□□ -1.02
CLDN18-201ENST00000183605 PSMF1Q92530 271 aa8.66□□□□□ -1.02
CLDN18-201ENST00000183605 KLHDC7BQ96G42 594 aa8.66□□□□□ -1.02
CLDN18-201ENST00000183605 ABHD14BQ96IU4 210 aa8.66□□□□□ -1.02
CLDN18-201ENST00000183605 ALKBH7Q9BT30 221 aaPredicted RBP8.66□□□□□ -1.02
CLDN18-201ENST00000183605 CTXND1A0A1B0GTU2 59 aa8.65□□□□□ -1.02
CLDN18-201ENST00000183605 LOC102725191A0A1B0GVB3 256 aa8.65□□□□□ -1.02
CLDN18-201ENST00000183605 CBR3O75828 277 aa8.65□□□□□ -1.02
CLDN18-201ENST00000183605 SPINK2P20155 84 aa8.65□□□□□ -1.02
CLDN18-201ENST00000183605 TGFBR3Q03167 851 aa8.65□□□□□ -1.02
CLDN18-201ENST00000183605 EXT1Q16394 746 aa8.65□□□□□ -1.02
CLDN18-201ENST00000183605 SNAI3Q3KNW1 292 aa8.65□□□□□ -1.02
CLDN18-201ENST00000183605 TMEM211Q6ICI0 200 aa8.65□□□□□ -1.02
CLDN18-201ENST00000183605 ZNF596Q8TC21 504 aa8.65□□□□□ -1.02
CLDN18-201ENST00000183605 RNASE8Q8TDE3 154 aaKnown RBP8.65□□□□□ -1.02
CLDN18-201ENST00000183605 MBD3L1Q8WWY6 194 aa8.65□□□□□ -1.02
CLDN18-201ENST00000183605 TMEM204Q9BSN7 226 aa8.65□□□□□ -1.02
CLDN18-201ENST00000183605 GAL3ST2Q9H3Q3 398 aa8.65□□□□□ -1.02
CLDN18-201ENST00000183605 UQCR10Q9UDW1 63 aa8.65□□□□□ -1.02
CLDN18-201ENST00000183605 NAT8BQ9UHF3 227 aa8.65□□□□□ -1.02
CLDN18-201ENST00000183605 CLDN16Q9Y5I7 305 aa8.65□□□□□ -1.02
CLDN18-201ENST00000183605 PGPEP1LA6NFU8 196 aa8.65□□□□□ -1.02
CLDN18-201ENST00000183605 DHHO43323 396 aa8.65□□□□□ -1.02
CLDN18-201ENST00000183605 PAX1P15863 534 aa8.65□□□□□ -1.02
CLDN18-201ENST00000183605 ADMP35318 185 aa8.65□□□□□ -1.02
CLDN18-201ENST00000183605 LCN2P80188 198 aa8.65□□□□□ -1.02
CLDN18-201ENST00000183605 ZNF611Q8N823 705 aa8.65□□□□□ -1.02
CLDN18-201ENST00000183605 OR5L2Q8NGL0 311 aa8.65□□□□□ -1.02
CLDN18-201ENST00000183605 TWSG1Q9GZX9 223 aa8.65□□□□□ -1.02
CLDN18-201ENST00000183605 SERTAD4Q9NUC0 356 aa8.65□□□□□ -1.02
CLDN18-201ENST00000183605 A0A0U1RQV5 110 aa8.64□□□□□ -1.03
CLDN18-201ENST00000183605 LILRA1O75019 489 aa8.64□□□□□ -1.03
CLDN18-201ENST00000183605 CLPSP04118 112 aa8.64□□□□□ -1.03
CLDN18-201ENST00000183605 IGKV3-11P04433 115 aa8.64□□□□□ -1.03
CLDN18-201ENST00000183605 OTX2P32243 289 aa8.64□□□□□ -1.03
CLDN18-201ENST00000183605 ANKRD39Q53RE8 183 aa8.64□□□□□ -1.03
CLDN18-201ENST00000183605 MKXQ8IYA7 352 aa8.64□□□□□ -1.03
CLDN18-201ENST00000183605 OR10G8Q8NGN5 311 aa8.64□□□□□ -1.03
CLDN18-201ENST00000183605 TMEM56Q96MV1 263 aa8.64□□□□□ -1.03
CLDN18-201ENST00000183605 WNT5BQ9H1J7 359 aa8.64□□□□□ -1.03
CLDN18-201ENST00000183605 GPR27Q9NS67 375 aa8.64□□□□□ -1.03
CLDN18-201ENST00000183605 LAMTOR2Q9Y2Q5 125 aa8.64□□□□□ -1.03
CLDN18-201ENST00000183605 TMEM56-RWDD3S4R434 201 aa8.64□□□□□ -1.03
CLDN18-201ENST00000183605 SNURFLB1AK76 121 aa8.64□□□□□ -1.03
CLDN18-201ENST00000183605 NUPR1O60356 82 aa8.64□□□□□ -1.03
CLDN18-201ENST00000183605 COL9A1P20849 921 aa8.64□□□□□ -1.03
CLDN18-201ENST00000183605 F2RP25116 425 aa8.64□□□□□ -1.03
CLDN18-201ENST00000183605 CDKN1AP38936 164 aa8.64□□□□□ -1.03
CLDN18-201ENST00000183605 ZFP36L1Q07352 338 aaKnown RBP8.64□□□□□ -1.03
CLDN18-201ENST00000183605 ZNF726P1Q15940 193 aa8.64□□□□□ -1.03
CLDN18-201ENST00000183605 SLC25A47Q6Q0C1 308 aa8.64□□□□□ -1.03
CLDN18-201ENST00000183605 TCTEX1D1Q8N7M0 179 aa8.64□□□□□ -1.03
CLDN18-201ENST00000183605 CADM4Q8NFZ8 388 aa8.64□□□□□ -1.03
CLDN18-201ENST00000183605 OR10P1Q8NGE3 313 aa8.64□□□□□ -1.03
CLDN18-201ENST00000183605 RLN3Q8WXF3 142 aa8.64□□□□□ -1.03
CLDN18-201ENST00000183605 C20orf144Q9BQM9 153 aa8.64□□□□□ -1.03
CLDN18-201ENST00000183605 PSMG3Q9BT73 122 aaPredicted RBP8.64□□□□□ -1.03
CLDN18-201ENST00000183605 MTIF3Q9H2K0 278 aaKnown RBP8.64□□□□□ -1.03
CLDN18-201ENST00000183605 PTRH2Q9Y3E5 179 aaKnown RBP8.64□□□□□ -1.03
CLDN18-201ENST00000183605 TRAPPC2LH3BP13 241 aa8.64□□□□□ -1.03
CLDN18-201ENST00000183605 CAPZBP47756 277 aa8.64□□□□□ -1.03
CLDN18-201ENST00000183605 KLF3P57682 345 aaPredicted RBP8.64□□□□□ -1.03
CLDN18-201ENST00000183605 ZNF525Q8N782 197 aa8.64□□□□□ -1.03
CLDN18-201ENST00000183605 WNT10AQ9GZT5 417 aa8.64□□□□□ -1.03
CLDN18-201ENST00000183605 MRPL18Q9H0U6 180 aaKnown RBP8.64□□□□□ -1.03
CLDN18-201ENST00000183605 TIMM8BQ9Y5J9 83 aaPredicted RBP8.64□□□□□ -1.03
CLDN18-201ENST00000183605 IGKV1D-13A0A0B4J2D9 117 aa8.63□□□□□ -1.03
CLDN18-201ENST00000183605 SLC22A20A6NK97 555 aa8.63□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 43.4 ms