RNA–Protein interactions for RNA: ENST00000054950.3

RCN1-201, Transcript of reticulocalbin 1, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene RCN1, Length 2,572 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RCN1-201ENST00000054950 CELA3AP09093 270 aa17.24■□□□□ 0.35
RCN1-201ENST00000054950 SCGB1C1Q8TD33 95 aa17.24■□□□□ 0.35
RCN1-201ENST00000054950 RHBDL1O75783 438 aa17.23■□□□□ 0.35
RCN1-201ENST00000054950 WDR25Q64LD2 544 aaPredicted RBP17.23■□□□□ 0.35
RCN1-201ENST00000054950 H1FOOQ8IZA3 346 aaPredicted RBP17.23■□□□□ 0.35
RCN1-201ENST00000054950 ZNF525Q8N782 197 aa17.23■□□□□ 0.35
RCN1-201ENST00000054950 NECAP1Q8NC96 275 aa17.23■□□□□ 0.35
RCN1-201ENST00000054950 PSMF1Q92530 271 aa17.23■□□□□ 0.35
RCN1-201ENST00000054950 SGCZQ96LD1 299 aa17.23■□□□□ 0.35
RCN1-201ENST00000054950 PSENENQ9NZ42 101 aa17.23■□□□□ 0.35
RCN1-201ENST00000054950 CISD1Q9NZ45 108 aaKnown RBP17.23■□□□□ 0.35
RCN1-201ENST00000054950 TNRC6BQ9UPQ9 1833 aaKnown RBP17.23■□□□□ 0.35
RCN1-201ENST00000054950 IGHV3-64DA0A0J9YX35 117 aa17.23■□□□□ 0.35
RCN1-201ENST00000054950 OR5H1A6NKK0 313 aa17.23■□□□□ 0.35
RCN1-201ENST00000054950 IGKV1-5P01602 117 aa17.23■□□□□ 0.35
RCN1-201ENST00000054950 IGLV2-14P01704 120 aa17.23■□□□□ 0.35
RCN1-201ENST00000054950 CYC1P08574 325 aa17.23■□□□□ 0.35
RCN1-201ENST00000054950 OR8G1Q15617 311 aa17.23■□□□□ 0.35
RCN1-201ENST00000054950 SPINK14Q6IE38 97 aa17.23■□□□□ 0.35
RCN1-201ENST00000054950 TUSC5Q8IXB3 177 aa17.23■□□□□ 0.35
RCN1-201ENST00000054950 PATE3B3GLJ2 98 aa17.22■□□□□ 0.35
RCN1-201ENST00000054950 CLEC12BQ2HXU8 276 aa17.22■□□□□ 0.35
RCN1-201ENST00000054950 RBKSQ9H477 322 aa17.22■□□□□ 0.35
RCN1-201ENST00000054950 A0A1W2PR80 420 aa17.22■□□□□ 0.35
RCN1-201ENST00000054950 CLDN34H7C241 214 aa17.22■□□□□ 0.35
RCN1-201ENST00000054950 SYNGR2O43760 224 aa17.22■□□□□ 0.35
RCN1-201ENST00000054950 CYB5R3P00387 301 aaPredicted RBP17.22■□□□□ 0.35
RCN1-201ENST00000054950 HIST1H1BP16401 226 aaKnown RBP17.22■□□□□ 0.35
RCN1-201ENST00000054950 DPPA3Q6W0C5 159 aa17.22■□□□□ 0.35
RCN1-201ENST00000054950 IL22RA2Q969J5 263 aa17.22■□□□□ 0.35
RCN1-201ENST00000054950 SDF2L1Q9HCN8 221 aa17.22■□□□□ 0.35
RCN1-201ENST00000054950 GFOD1Q9NXC2 390 aa17.22■□□□□ 0.35
RCN1-201ENST00000054950 PCSK5Q92824 1860 aa17.22■□□□□ 0.35
RCN1-201ENST00000054950 URB1O60287 2271 aaKnown RBP17.21■□□□□ 0.35
RCN1-201ENST00000054950 TRAV1-1A0A0B4J248 108 aa17.21■□□□□ 0.35
RCN1-201ENST00000054950 RNPS1Q15287 305 aaKnown RBP17.21■□□□□ 0.35
RCN1-201ENST00000054950 SRSF7Q16629 238 aaKnown RBP eCLIP17.21■□□□□ 0.35
RCN1-201ENST00000054950 SPANXN5Q5MJ07 72 aa17.21■□□□□ 0.35
RCN1-201ENST00000054950 PPP1R32Q7Z5V6 425 aa17.21■□□□□ 0.35
RCN1-201ENST00000054950 LILRB2Q8N423 598 aa17.21■□□□□ 0.35
RCN1-201ENST00000054950 C14orf144Q96I85 54 aa17.21■□□□□ 0.35
RCN1-201ENST00000054950 OPA3Q9H6K4 179 aa17.21■□□□□ 0.35
RCN1-201ENST00000054950 COL6A3P12111 3177 aa17.21■□□□□ 0.35
RCN1-201ENST00000054950 DOCK11Q5JSL3 2073 aa17.21■□□□□ 0.35
RCN1-201ENST00000054950 PHOX2AO14813 284 aa17.21■□□□□ 0.35
RCN1-201ENST00000054950 GFRA1P56159 465 aa17.21■□□□□ 0.35
RCN1-201ENST00000054950 RAB40CQ96S21 281 aa17.21■□□□□ 0.35
RCN1-201ENST00000054950 CABLES2Q9BTV7 478 aa17.21■□□□□ 0.35
RCN1-201ENST00000054950 SMOC1Q9H4F8 434 aa17.21■□□□□ 0.35
RCN1-201ENST00000054950 KCNS2Q9ULS6 477 aa17.21■□□□□ 0.35
RCN1-201ENST00000054950 TNRC6AQ8NDV7 1962 aaKnown RBP17.2■□□□□ 0.34
RCN1-201ENST00000054950 PTBP3O95758 552 aaKnown RBP17.2■□□□□ 0.34
RCN1-201ENST00000054950 IGKV1D-33P01593 117 aa17.2■□□□□ 0.34
RCN1-201ENST00000054950 IGKV1-33P01594 117 aa17.2■□□□□ 0.34
RCN1-201ENST00000054950 CTXN2P0C2S0 81 aa17.2■□□□□ 0.34
RCN1-201ENST00000054950 CLN3Q13286 438 aa17.2■□□□□ 0.34
RCN1-201ENST00000054950 SPATA46Q5T0L3 261 aa17.2■□□□□ 0.34
RCN1-201ENST00000054950 VASH2Q86V25 355 aa17.2■□□□□ 0.34
RCN1-201ENST00000054950 HES7Q9BYE0 225 aa17.2■□□□□ 0.34
RCN1-201ENST00000054950 DLL3Q9NYJ7 618 aa17.2■□□□□ 0.34
RCN1-201ENST00000054950 UBE2L5PA0A1B0GUS4 154 aa17.2■□□□□ 0.34
RCN1-201ENST00000054950 CD300LBA8K4G0 201 aa17.2■□□□□ 0.34
RCN1-201ENST00000054950 MDH2P40926 338 aaKnown RBP17.2■□□□□ 0.34
RCN1-201ENST00000054950 RND2P52198 227 aa17.2■□□□□ 0.34
RCN1-201ENST00000054950 RPS16P62249 146 aaKnown RBP17.2■□□□□ 0.34
RCN1-201ENST00000054950 ADIRFQ15847 76 aa17.2■□□□□ 0.34
RCN1-201ENST00000054950 OR10V1Q8NGI7 309 aa17.2■□□□□ 0.34
RCN1-201ENST00000054950 OR13D1Q8NGV5 346 aa17.2■□□□□ 0.34
RCN1-201ENST00000054950 OR8G2PQ6IF36 304 aa17.19■□□□□ 0.34
RCN1-201ENST00000054950 SAXO1Q8IYX7 474 aa17.19■□□□□ 0.34
RCN1-201ENST00000054950 OR10G4Q8NGN3 311 aa17.19■□□□□ 0.34
RCN1-201ENST00000054950 PACRGQ96M98 296 aaPredicted RBP17.19■□□□□ 0.34
RCN1-201ENST00000054950 OR4C12Q96R67 309 aa17.19■□□□□ 0.34
RCN1-201ENST00000054950 HIST1H2BLQ99880 126 aa17.19■□□□□ 0.34
RCN1-201ENST00000054950 HIPK2Q9H2X6 1198 aa17.19■□□□□ 0.34
RCN1-201ENST00000054950 UFSP2Q9NUQ7 469 aa17.19■□□□□ 0.34
RCN1-201ENST00000054950 RBM7Q9Y580 266 aaKnown RBP17.19■□□□□ 0.34
RCN1-201ENST00000054950 GTF3C1Q12789 2109 aa17.19■□□□□ 0.34
RCN1-201ENST00000054950 MAP1LC3B2A6NCE7 125 aa17.19■□□□□ 0.34
RCN1-201ENST00000054950 B4DEV8 164 aa17.19■□□□□ 0.34
RCN1-201ENST00000054950 YKT6O15498 198 aa17.19■□□□□ 0.34
RCN1-201ENST00000054950 WDR1O75083 606 aa17.19■□□□□ 0.34
RCN1-201ENST00000054950 TUBG1P23258 451 aa17.19■□□□□ 0.34
RCN1-201ENST00000054950 MEGF10Q96KG7 1140 aa17.19■□□□□ 0.34
RCN1-201ENST00000054950 HIST1H2AAQ96QV6 131 aa17.19■□□□□ 0.34
RCN1-201ENST00000054950 MAP1LC3BQ9GZQ8 125 aa17.19■□□□□ 0.34
RCN1-201ENST00000054950 TESK1Q15569 626 aa17.18■□□□□ 0.34
RCN1-201ENST00000054950 ZNF585BQ52M93 769 aa17.18■□□□□ 0.34
RCN1-201ENST00000054950 FAM53AQ6NSI3 398 aaPredicted RBP17.18■□□□□ 0.34
RCN1-201ENST00000054950 ELOA3CA0A087WX78 387 aaPredicted RBP17.18■□□□□ 0.34
RCN1-201ENST00000054950 SIRPB1O00241 398 aa17.18■□□□□ 0.34
RCN1-201ENST00000054950 S100GP29377 79 aa17.18■□□□□ 0.34
RCN1-201ENST00000054950 C3AR1Q16581 482 aa17.18■□□□□ 0.34
RCN1-201ENST00000054950 FAM58AQ8N1B3 248 aa17.18■□□□□ 0.34
RCN1-201ENST00000054950 GATAD1Q8WUU5 269 aa17.18■□□□□ 0.34
RCN1-201ENST00000054950 MBD3L1Q8WWY6 194 aa17.18■□□□□ 0.34
RCN1-201ENST00000054950 OR5P3Q8WZ94 311 aa17.18■□□□□ 0.34
RCN1-201ENST00000054950 APOBEC3DQ96AK3 386 aaPredicted RBP17.18■□□□□ 0.34
RCN1-201ENST00000054950 GAB2Q9UQC2 676 aa17.18■□□□□ 0.34
RCN1-201ENST00000054950 NBEAQ8NFP9 2946 aa17.18■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms