RNA–Protein interactions for RNA: ENSMUST00000115537.1

Col28a1-201, Transcript of Collagen alpha-1(XXVIII) chain, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Col28a1, Length 4,230 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Col28a1-201ENSMUST00000115537 Cd300eQ8K249 196 aa7.83□□□□□ -1.16
Col28a1-201ENSMUST00000115537 Syngr3Q8R191 229 aa7.83□□□□□ -1.16
Col28a1-201ENSMUST00000115537 Olfr1141Q8VFQ7 311 aa7.83□□□□□ -1.16
Col28a1-201ENSMUST00000115537 Steap4Q923B6 470 aa7.83□□□□□ -1.16
Col28a1-201ENSMUST00000115537 Znf593Q9DB42 134 aaKnown RBP7.83□□□□□ -1.16
Col28a1-201ENSMUST00000115537 Iglc4A0A0G2JEK5 104 aa7.83□□□□□ -1.16
Col28a1-201ENSMUST00000115537 Igkv6-20A0A140T8P2 115 aa7.83□□□□□ -1.16
Col28a1-201ENSMUST00000115537 Olfr417F8VQB1 309 aa7.83□□□□□ -1.16
Col28a1-201ENSMUST00000115537 Vmn1r204I7HIK1 302 aa7.83□□□□□ -1.16
Col28a1-201ENSMUST00000115537 Ascl4M0QW46 144 aa7.83□□□□□ -1.16
Col28a1-201ENSMUST00000115537 Galr3O88853 370 aa7.83□□□□□ -1.16
Col28a1-201ENSMUST00000115537 Hist1h2bmP10854 126 aa7.83□□□□□ -1.16
Col28a1-201ENSMUST00000115537 Hist1h1cP15864 212 aa7.83□□□□□ -1.16
Col28a1-201ENSMUST00000115537 Rpl19P84099 196 aaKnown RBP7.83□□□□□ -1.16
Col28a1-201ENSMUST00000115537 Hist1h2bhQ64478 126 aa7.83□□□□□ -1.16
Col28a1-201ENSMUST00000115537 Hist2h2bbQ64525 126 aa7.83□□□□□ -1.16
Col28a1-201ENSMUST00000115537 Zfp933Q6PEE4 468 aa7.83□□□□□ -1.16
Col28a1-201ENSMUST00000115537 Hist1h2bcQ6ZWY9 126 aaKnown RBP7.83□□□□□ -1.16
Col28a1-201ENSMUST00000115537 Prss27Q8BJR6 328 aa7.83□□□□□ -1.16
Col28a1-201ENSMUST00000115537 Actrt3Q8BXF8 369 aa7.83□□□□□ -1.16
Col28a1-201ENSMUST00000115537 Nadk2Q8C5H8 452 aa7.83□□□□□ -1.16
Col28a1-201ENSMUST00000115537 Tmem56Q8CGF5 276 aa7.83□□□□□ -1.16
Col28a1-201ENSMUST00000115537 FuomQ8R2K1 153 aa7.83□□□□□ -1.16
Col28a1-201ENSMUST00000115537 Olfr994Q8VF73 314 aa7.83□□□□□ -1.16
Col28a1-201ENSMUST00000115537 Olfr1395Q8VGD7 317 aa7.83□□□□□ -1.16
Col28a1-201ENSMUST00000115537 Ms4a6bQ99N09 244 aa7.83□□□□□ -1.16
Col28a1-201ENSMUST00000115537 Atg12Q9CQY1 141 aa7.83□□□□□ -1.16
Col28a1-201ENSMUST00000115537 Gpx8Q9D7B7 209 aa7.83□□□□□ -1.16
Col28a1-201ENSMUST00000115537 GlceQ9EPS3 618 aa7.83□□□□□ -1.16
Col28a1-201ENSMUST00000115537 Kif26aQ52KG5 1881 aa7.83□□□□□ -1.16
Col28a1-201ENSMUST00000115537 Gm36864A0A1Y7VJE6 447 aa7.83□□□□□ -1.16
Col28a1-201ENSMUST00000115537 Olfr1289A0A288CFY5 326 aa7.83□□□□□ -1.16
Col28a1-201ENSMUST00000115537 Vmn1r152E9Q9N3 307 aa7.83□□□□□ -1.16
Col28a1-201ENSMUST00000115537 Slc17a3G3UWD9 498 aa7.83□□□□□ -1.16
Col28a1-201ENSMUST00000115537 Gm8677K9J7G9 307 aa7.83□□□□□ -1.16
Col28a1-201ENSMUST00000115537 Vmn1r104L7N293 307 aa7.83□□□□□ -1.16
Col28a1-201ENSMUST00000115537 Cd74P04441 279 aa7.83□□□□□ -1.16
Col28a1-201ENSMUST00000115537 Ccl9P51670 122 aa7.83□□□□□ -1.16
Col28a1-201ENSMUST00000115537 Thsd4Q3UTY6 1018 aa7.83□□□□□ -1.16
Col28a1-201ENSMUST00000115537 4930512M02RikQ5SQK8 218 aa7.83□□□□□ -1.16
Col28a1-201ENSMUST00000115537 Opn5Q6VZZ7 377 aa7.83□□□□□ -1.16
Col28a1-201ENSMUST00000115537 Olfr1290Q7TQX8 312 aa7.83□□□□□ -1.16
Col28a1-201ENSMUST00000115537 Ip6k3Q8BWD2 396 aa7.83□□□□□ -1.16
Col28a1-201ENSMUST00000115537 Spata33Q8C624 132 aa7.83□□□□□ -1.16
Col28a1-201ENSMUST00000115537 RydenQ8CAK3 290 aaKnown RBP7.83□□□□□ -1.16
Col28a1-201ENSMUST00000115537 AmtQ8CFA2 403 aaKnown RBP7.83□□□□□ -1.16
Col28a1-201ENSMUST00000115537 Chrdl2Q8VEA6 426 aa7.83□□□□□ -1.16
Col28a1-201ENSMUST00000115537 Olfr883Q8VF64 309 aa7.83□□□□□ -1.16
Col28a1-201ENSMUST00000115537 Olfr1451Q8VFX5 310 aa7.83□□□□□ -1.16
Col28a1-201ENSMUST00000115537 Nsa2Q9CR47 260 aaKnown RBP7.83□□□□□ -1.16
Col28a1-201ENSMUST00000115537 Srxn1Q9D975 136 aa7.83□□□□□ -1.16
Col28a1-201ENSMUST00000115537 Dda1Q9D9Z5 102 aa7.83□□□□□ -1.16
Col28a1-201ENSMUST00000115537 PrndQ9QUG3 179 aa7.83□□□□□ -1.16
Col28a1-201ENSMUST00000115537 Anxa10Q9QZ10 324 aa7.83□□□□□ -1.16
Col28a1-201ENSMUST00000115537 Gdf15Q9Z0J7 303 aa7.83□□□□□ -1.16
Col28a1-201ENSMUST00000115537 Scgb1b12A0A087WP21 93 aa7.83□□□□□ -1.16
Col28a1-201ENSMUST00000115537 Olfr709-ps1A0A140T8J9 307 aa7.83□□□□□ -1.16
Col28a1-201ENSMUST00000115537 Gm11361A0A1Y7VKY1 152 aa7.83□□□□□ -1.16
Col28a1-201ENSMUST00000115537 Olfr1029A2ATE0 324 aa7.83□□□□□ -1.16
Col28a1-201ENSMUST00000115537 4930444P10RikD3YUR1 185 aa7.83□□□□□ -1.16
Col28a1-201ENSMUST00000115537 Gm17654F7AXR3 209 aa7.83□□□□□ -1.16
Col28a1-201ENSMUST00000115537 Ear3O35290 156 aa7.83□□□□□ -1.16
Col28a1-201ENSMUST00000115537 Rps18P62270 152 aaKnown RBP7.83□□□□□ -1.16
Col28a1-201ENSMUST00000115537 Fgf17P63075 216 aa7.83□□□□□ -1.16
Col28a1-201ENSMUST00000115537 SgcbP82349 320 aa7.83□□□□□ -1.16
Col28a1-201ENSMUST00000115537 Nkain2Q4PNJ2 208 aa7.83□□□□□ -1.16
Col28a1-201ENSMUST00000115537 Fam173aQ501J2 229 aa7.83□□□□□ -1.16
Col28a1-201ENSMUST00000115537 Pafah1b3Q61205 232 aa7.83□□□□□ -1.16
Col28a1-201ENSMUST00000115537 St8sia3Q64689 380 aa7.83□□□□□ -1.16
Col28a1-201ENSMUST00000115537 Mfsd8Q8BH31 519 aa7.83□□□□□ -1.16
Col28a1-201ENSMUST00000115537 Prss45Q8K4I7 317 aa7.83□□□□□ -1.16
Col28a1-201ENSMUST00000115537 Polr2hQ923G2 150 aa7.83□□□□□ -1.16
Col28a1-201ENSMUST00000115537 Rtn4rQ99PI8 473 aa7.83□□□□□ -1.16
Col28a1-201ENSMUST00000115537 Snu13Q9D0T1 128 aaKnown RBP7.83□□□□□ -1.16
Col28a1-201ENSMUST00000115537 OxsmQ9D404 459 aa7.83□□□□□ -1.16
Col28a1-201ENSMUST00000115537 Lmntd1Q9D4C1 413 aa7.83□□□□□ -1.16
Col28a1-201ENSMUST00000115537 Olfr154Q9QY00 318 aa7.83□□□□□ -1.16
Col28a1-201ENSMUST00000115537 MokQ9WVS4 420 aa7.83□□□□□ -1.16
Col28a1-201ENSMUST00000115537 Ssc4dA1L0T3 586 aa7.82□□□□□ -1.16
Col28a1-201ENSMUST00000115537 Gm14403A2BFU4 402 aa7.82□□□□□ -1.16
Col28a1-201ENSMUST00000115537 Zfand5O88878 213 aa7.82□□□□□ -1.16
Col28a1-201ENSMUST00000115537 SellP18337 372 aa7.82□□□□□ -1.16
Col28a1-201ENSMUST00000115537 Olfr13P34984 310 aa7.82□□□□□ -1.16
Col28a1-201ENSMUST00000115537 Lsm6P62313 80 aaKnown RBP7.82□□□□□ -1.16
Col28a1-201ENSMUST00000115537 Olfr90Q0VEL5 310 aa7.82□□□□□ -1.16
Col28a1-201ENSMUST00000115537 H2-M10.3Q85ZW6 330 aa7.82□□□□□ -1.16
Col28a1-201ENSMUST00000115537 Flrt3Q8BGT1 649 aa7.82□□□□□ -1.16
Col28a1-201ENSMUST00000115537 Vash1Q8C1W1 375 aa7.82□□□□□ -1.16
Col28a1-201ENSMUST00000115537 Olfr509Q8VF20 321 aa7.82□□□□□ -1.16
Col28a1-201ENSMUST00000115537 Olfr512Q8VFZ4 326 aa7.82□□□□□ -1.16
Col28a1-201ENSMUST00000115537 D730048I06RikQ9CQB8 106 aa7.82□□□□□ -1.16
Col28a1-201ENSMUST00000115537 Vkorc1Q9CRC0 161 aa7.82□□□□□ -1.16
Col28a1-201ENSMUST00000115537 Gins3Q9CY94 216 aa7.82□□□□□ -1.16
Col28a1-201ENSMUST00000115537 Tceal8Q9CZY2 117 aa7.82□□□□□ -1.16
Col28a1-201ENSMUST00000115537 CutcQ9D8X1 272 aa7.82□□□□□ -1.16
Col28a1-201ENSMUST00000115537 Gm11214V9GX06 183 aa7.82□□□□□ -1.16
Col28a1-201ENSMUST00000115537 Zfp407G3UVV3 2246 aa7.82□□□□□ -1.16
Col28a1-201ENSMUST00000115537 Olfr588-ps1A0A1B0GSZ2 313 aa7.82□□□□□ -1.16
Col28a1-201ENSMUST00000115537 Irs3O54718 495 aa7.82□□□□□ -1.16
Col28a1-201ENSMUST00000115537 Csf3P09920 208 aa7.82□□□□□ -1.16
Retrieved 100 of 22,080 RNA–protein pairs in 25.4 ms