RNA–Protein interactions for RNA: ENSMUST00000041643.3

Pcif1-201, Transcript of Phosphorylated CTD-interacting factor 1, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Pcif1, Length 5,772 nt, Biotype protein coding, Subcellular localisation Cytoplasm .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Pcif1-201ENSMUST00000041643 Lmx1bO88609 395 aa10.45□□□□□ -0.74
Pcif1-201ENSMUST00000041643 LipnQ3U4B4 400 aa10.45□□□□□ -0.74
Pcif1-201ENSMUST00000041643 Samt2Q497M0 247 aa10.45□□□□□ -0.74
Pcif1-201ENSMUST00000041643 Usf1Q61069 310 aa10.45□□□□□ -0.74
Pcif1-201ENSMUST00000041643 Ldlrad4Q8BWJ4 306 aa10.45□□□□□ -0.74
Pcif1-201ENSMUST00000041643 Inpp5kQ8C5L6 468 aa10.45□□□□□ -0.74
Pcif1-201ENSMUST00000041643 Arrdc2Q9D668 407 aa10.45□□□□□ -0.74
Pcif1-201ENSMUST00000041643 Vmn1r44Q9EQ47 310 aa10.45□□□□□ -0.74
Pcif1-201ENSMUST00000041643 Olfr122W4VSP0 330 aa10.45□□□□□ -0.74
Pcif1-201ENSMUST00000041643 H3BKT1 185 aa10.45□□□□□ -0.74
Pcif1-201ENSMUST00000041643 Gm10097J3KMK7 105 aa10.45□□□□□ -0.74
Pcif1-201ENSMUST00000041643 CamlgP49070 294 aa10.45□□□□□ -0.74
Pcif1-201ENSMUST00000041643 CebpgP53568 150 aa10.45□□□□□ -0.74
Pcif1-201ENSMUST00000041643 Scand1Q2M4I6 142 aa10.45□□□□□ -0.74
Pcif1-201ENSMUST00000041643 Tamm41Q3TUH1 337 aa10.45□□□□□ -0.74
Pcif1-201ENSMUST00000041643 Klk8Q61955 260 aa10.45□□□□□ -0.74
Pcif1-201ENSMUST00000041643 LipkQ8BM14 398 aa10.45□□□□□ -0.74
Pcif1-201ENSMUST00000041643 4922502D21RikQ8C634 189 aa10.45□□□□□ -0.74
Pcif1-201ENSMUST00000041643 Q9D1Z2 194 aa10.45□□□□□ -0.74
Pcif1-201ENSMUST00000041643 Cldn34dA2AGU5 210 aa10.45□□□□□ -0.74
Pcif1-201ENSMUST00000041643 Olfr62L7MU75 315 aa10.45□□□□□ -0.74
Pcif1-201ENSMUST00000041643 St8sia3Q64689 380 aa10.45□□□□□ -0.74
Pcif1-201ENSMUST00000041643 Olfr487Q7TRU9 314 aa10.45□□□□□ -0.74
Pcif1-201ENSMUST00000041643 Zbtb49Q8BXX2 756 aa10.45□□□□□ -0.74
Pcif1-201ENSMUST00000041643 Pla2g3Q8BZT7 504 aa10.45□□□□□ -0.74
Pcif1-201ENSMUST00000041643 Eddm3bQ8K0E4 149 aa10.45□□□□□ -0.74
Pcif1-201ENSMUST00000041643 Olfr221B2RVX8 311 aa10.45□□□□□ -0.74
Pcif1-201ENSMUST00000041643 Wdr25E9Q349 535 aa10.45□□□□□ -0.74
Pcif1-201ENSMUST00000041643 Olfr1471F6QVZ8 314 aa10.45□□□□□ -0.74
Pcif1-201ENSMUST00000041643 Wdr1O88342 606 aaKnown RBP10.45□□□□□ -0.74
Pcif1-201ENSMUST00000041643 Lyz1P17897 148 aa10.45□□□□□ -0.74
Pcif1-201ENSMUST00000041643 AhrP30561 848 aa10.45□□□□□ -0.74
Pcif1-201ENSMUST00000041643 Gnb2P62880 340 aa10.45□□□□□ -0.74
Pcif1-201ENSMUST00000041643 Sec14l3Q5SQ27 401 aa10.45□□□□□ -0.74
Pcif1-201ENSMUST00000041643 Paqr8Q80ZE5 354 aa10.45□□□□□ -0.74
Pcif1-201ENSMUST00000041643 Atpif1O35143 106 aa10.45□□□□□ -0.74
Pcif1-201ENSMUST00000041643 Bloc1s1O55102 125 aa10.45□□□□□ -0.74
Pcif1-201ENSMUST00000041643 Mtatp6P00848 226 aa10.45□□□□□ -0.74
Pcif1-201ENSMUST00000041643 Il9P15247 144 aa10.45□□□□□ -0.74
Pcif1-201ENSMUST00000041643 Mpc1P63030 109 aa10.45□□□□□ -0.74
Pcif1-201ENSMUST00000041643 Acsf3Q3URE1 583 aa10.45□□□□□ -0.74
Pcif1-201ENSMUST00000041643 Npy6rQ61212 371 aa10.45□□□□□ -0.74
Pcif1-201ENSMUST00000041643 Tmprss3Q8K1T0 453 aa10.45□□□□□ -0.74
Pcif1-201ENSMUST00000041643 Gm45808A0A1B0GSH8 263 aa10.44□□□□□ -0.74
Pcif1-201ENSMUST00000041643 Olfr1179A2AUS6 307 aa10.44□□□□□ -0.74
Pcif1-201ENSMUST00000041643 Olfr1314A2AVL6 312 aa10.44□□□□□ -0.74
Pcif1-201ENSMUST00000041643 Nxpe5E0CX47 564 aa10.44□□□□□ -0.74
Pcif1-201ENSMUST00000041643 Vmn1r224E9PWK2 298 aa10.44□□□□□ -0.74
Pcif1-201ENSMUST00000041643 Zfp955bL7N232 545 aa10.44□□□□□ -0.74
Pcif1-201ENSMUST00000041643 Zfp7Q3TFZ4 685 aa10.44□□□□□ -0.74
Pcif1-201ENSMUST00000041643 Neil2Q6R2P8 329 aa10.44□□□□□ -0.74
Pcif1-201ENSMUST00000041643 Tmem221Q8K071 230 aa10.44□□□□□ -0.74
Pcif1-201ENSMUST00000041643 Olfr368Q8VF22 327 aa10.44□□□□□ -0.74
Pcif1-201ENSMUST00000041643 Olfr716Q9EPG6 314 aa10.44□□□□□ -0.74
Pcif1-201ENSMUST00000041643 Ighv6-5A0A0A6YWS9 119 aa10.44□□□□□ -0.74
Pcif1-201ENSMUST00000041643 Vmn2r82G3UWA2 865 aa10.44□□□□□ -0.74
Pcif1-201ENSMUST00000041643 Oas1bQ60856 376 aa10.44□□□□□ -0.74
Pcif1-201ENSMUST00000041643 Ndufb7Q9CR61 137 aa10.44□□□□□ -0.74
Pcif1-201ENSMUST00000041643 1700034E13RikQ9D2T6 108 aa10.44□□□□□ -0.74
Pcif1-201ENSMUST00000041643 Sult1b1Q9QWG7 299 aa10.44□□□□□ -0.74
Pcif1-201ENSMUST00000041643 Gm38303A0A0A6YWW8 100 aa10.44□□□□□ -0.74
Pcif1-201ENSMUST00000041643 Fpr2O88536 351 aa10.44□□□□□ -0.74
Pcif1-201ENSMUST00000041643 AanatO88816 205 aa10.44□□□□□ -0.74
Pcif1-201ENSMUST00000041643 GbaP17439 515 aa10.44□□□□□ -0.74
Pcif1-201ENSMUST00000041643 HexbP20060 536 aa10.44□□□□□ -0.74
Pcif1-201ENSMUST00000041643 PmchP56942 165 aa10.44□□□□□ -0.74
Pcif1-201ENSMUST00000041643 MENTQ569E4 350 aa10.44□□□□□ -0.74
Pcif1-201ENSMUST00000041643 Tgoln1Q62313 353 aa10.44□□□□□ -0.74
Pcif1-201ENSMUST00000041643 Cxcl3Q6W5C0 100 aa10.44□□□□□ -0.74
Pcif1-201ENSMUST00000041643 Cpeb3Q7TN99 716 aa10.44□□□□□ -0.74
Pcif1-201ENSMUST00000041643 Coro2aQ8C0P5 524 aa10.44□□□□□ -0.74
Pcif1-201ENSMUST00000041643 Olfr1450Q8VF19 325 aa10.44□□□□□ -0.74
Pcif1-201ENSMUST00000041643 Olfr512Q8VFZ4 326 aa10.44□□□□□ -0.74
Pcif1-201ENSMUST00000041643 Olfr483Q8VG05 315 aa10.44□□□□□ -0.74
Pcif1-201ENSMUST00000041643 P2ry4Q9JJS7 361 aa10.44□□□□□ -0.74
Pcif1-201ENSMUST00000041643 Tnfrsf19Q9JLL3 416 aa10.44□□□□□ -0.74
Pcif1-201ENSMUST00000041643 Gm9972E9Q053 102 aa10.44□□□□□ -0.74
Pcif1-201ENSMUST00000041643 Mex3aG3UYU0 520 aaKnown RBP10.44□□□□□ -0.74
Pcif1-201ENSMUST00000041643 IghgP01863 330 aa10.44□□□□□ -0.74
Pcif1-201ENSMUST00000041643 Prkar2aP12367 401 aa10.44□□□□□ -0.74
Pcif1-201ENSMUST00000041643 AregP31955 248 aa10.44□□□□□ -0.74
Pcif1-201ENSMUST00000041643 CycsP62897 105 aaKnown RBP10.44□□□□□ -0.74
Pcif1-201ENSMUST00000041643 Fam169bQ8CHT6 337 aa10.44□□□□□ -0.74
Pcif1-201ENSMUST00000041643 Olfr1151Q8VFQ8 308 aa10.44□□□□□ -0.74
Pcif1-201ENSMUST00000041643 Olfr1239Q8VGM8 305 aa10.44□□□□□ -0.74
Pcif1-201ENSMUST00000041643 Defb8Q91V82 60 aa10.44□□□□□ -0.74
Pcif1-201ENSMUST00000041643 Shisa5Q9D7I0 235 aa10.44□□□□□ -0.74
Pcif1-201ENSMUST00000041643 Mfsd4b2Q9D8I5 366 aa10.44□□□□□ -0.74
Pcif1-201ENSMUST00000041643 Zfp870J3QMA4 560 aa10.43□□□□□ -0.74
Pcif1-201ENSMUST00000041643 Gm20878L7N244 103 aa10.43□□□□□ -0.74
Pcif1-201ENSMUST00000041643 Gpr27O54897 379 aa10.43□□□□□ -0.74
Pcif1-201ENSMUST00000041643 Hist1h1dP43277 221 aaKnown RBP10.43□□□□□ -0.74
Pcif1-201ENSMUST00000041643 Rasl12Q08AT1 266 aa10.43□□□□□ -0.74
Pcif1-201ENSMUST00000041643 Tle4Q62441 773 aa10.43□□□□□ -0.74
Pcif1-201ENSMUST00000041643 Odf4Q8VI88 290 aa10.43□□□□□ -0.74
Pcif1-201ENSMUST00000041643 Tmem123Q91Z22 195 aa10.43□□□□□ -0.74
Pcif1-201ENSMUST00000041643 Gorasp2Q99JX3 451 aa10.43□□□□□ -0.74
Pcif1-201ENSMUST00000041643 Dtwd2Q9D0U1 298 aa10.43□□□□□ -0.74
Pcif1-201ENSMUST00000041643 PtprfA2A8L5 1898 aa10.43□□□□□ -0.74
Pcif1-201ENSMUST00000041643 Olfr896-ps1A0A1L1SRZ8 308 aa10.43□□□□□ -0.74
Retrieved 100 of 22,080 RNA–protein pairs in 42.8 ms