RNA–Protein interactions for RNA: ENSMUST00000040182.12

Ccdc88a-201, Transcript of Girdin, mousemouse

APPRIS P1 TSL 5 BASIC

Gene Ccdc88a, Length 9,376 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc88a-201ENSMUST00000040182 Zfp971A2BFG8 470 aa14.93□□□□□ -0.02
Ccdc88a-201ENSMUST00000040182 S1pr2P52592 352 aa14.93□□□□□ -0.02
Ccdc88a-201ENSMUST00000040182 Zfp970Q08BU3 522 aa14.93□□□□□ -0.02
Ccdc88a-201ENSMUST00000040182 Olfr901Q7TRD1 311 aa14.93□□□□□ -0.02
Ccdc88a-201ENSMUST00000040182 Rpp14Q9CQH8 122 aa14.93□□□□□ -0.02
Ccdc88a-201ENSMUST00000040182 PrkraQ9WTX2 313 aaKnown RBP14.93□□□□□ -0.02
Ccdc88a-201ENSMUST00000040182 Cox5bP19536 128 aa14.93□□□□□ -0.02
Ccdc88a-201ENSMUST00000040182 Thbs3Q05895 956 aa14.93□□□□□ -0.02
Ccdc88a-201ENSMUST00000040182 Lhfpl5Q4KL25 219 aa14.93□□□□□ -0.02
Ccdc88a-201ENSMUST00000040182 Zdhhc25Q810M4 279 aa14.93□□□□□ -0.02
Ccdc88a-201ENSMUST00000040182 A730046J19RikA0A1B0GSN8 89 aa14.93□□□□□ -0.02
Ccdc88a-201ENSMUST00000040182 Dhrs3O88876 302 aa14.93□□□□□ -0.02
Ccdc88a-201ENSMUST00000040182 B020004J07RikQ3UTC0 476 aa14.93□□□□□ -0.02
Ccdc88a-201ENSMUST00000040182 Olfr1349Q7TQV1 317 aa14.93□□□□□ -0.02
Ccdc88a-201ENSMUST00000040182 Olfr678Q8VG26 313 aa14.93□□□□□ -0.02
Ccdc88a-201ENSMUST00000040182 Olfr56Q8VGD6 315 aa14.93□□□□□ -0.02
Ccdc88a-201ENSMUST00000040182 Glipr2Q9CYL5 154 aa14.93□□□□□ -0.02
Ccdc88a-201ENSMUST00000040182 Vmn1r171Q9EPS6 316 aa14.93□□□□□ -0.02
Ccdc88a-201ENSMUST00000040182 Gm10036E9PYL9 178 aaKnown RBP14.92□□□□□ -0.02
Ccdc88a-201ENSMUST00000040182 P01798 113 aa14.92□□□□□ -0.02
Ccdc88a-201ENSMUST00000040182 RnasekQ8K3C0 98 aa14.92□□□□□ -0.02
Ccdc88a-201ENSMUST00000040182 ApehQ8R146 732 aa14.92□□□□□ -0.02
Ccdc88a-201ENSMUST00000040182 Utp4Q8R2N2 686 aaKnown RBP14.92□□□□□ -0.02
Ccdc88a-201ENSMUST00000040182 Gm14295A2BG91 834 aa14.92□□□□□ -0.02
Ccdc88a-201ENSMUST00000040182 Rab33bO35963 229 aa14.92□□□□□ -0.02
Ccdc88a-201ENSMUST00000040182 Avpr2O88721 371 aa14.92□□□□□ -0.02
Ccdc88a-201ENSMUST00000040182 Ccl5P30882 91 aa14.92□□□□□ -0.02
Ccdc88a-201ENSMUST00000040182 AmbpQ07456 349 aa14.92□□□□□ -0.02
Ccdc88a-201ENSMUST00000040182 Mospd3Q8BGG6 235 aa14.92□□□□□ -0.02
Ccdc88a-201ENSMUST00000040182 MrnipQ9D1F5 335 aa14.92□□□□□ -0.02
Ccdc88a-201ENSMUST00000040182 Fgfbp1O70514 251 aa14.92□□□□□ -0.02
Ccdc88a-201ENSMUST00000040182 Edem2Q8BJT9 577 aa14.92□□□□□ -0.02
Ccdc88a-201ENSMUST00000040182 Lrfn3Q8BLY3 626 aa14.92□□□□□ -0.02
Ccdc88a-201ENSMUST00000040182 Ammecr1Q9JHT5 344 aaKnown RBP14.92□□□□□ -0.02
Ccdc88a-201ENSMUST00000040182 Bcl2l10Q9Z0F3 191 aa14.92□□□□□ -0.02
Ccdc88a-201ENSMUST00000040182 GusbP12265 648 aa14.92□□□□□ -0.02
Ccdc88a-201ENSMUST00000040182 Pax4P32115 349 aa14.92□□□□□ -0.02
Ccdc88a-201ENSMUST00000040182 Fabp6P51162 128 aa14.92□□□□□ -0.02
Ccdc88a-201ENSMUST00000040182 Gm9Q3UKW5 162 aa14.92□□□□□ -0.02
Ccdc88a-201ENSMUST00000040182 Gramd2bQ6PEM6 445 aa14.92□□□□□ -0.02
Ccdc88a-201ENSMUST00000040182 DctdQ8K2D6 178 aa14.92□□□□□ -0.02
Ccdc88a-201ENSMUST00000040182 Olfr97Q8VFE1 310 aa14.92□□□□□ -0.02
Ccdc88a-201ENSMUST00000040182 H2-LP01897 362 aa14.92□□□□□ -0.02
Ccdc88a-201ENSMUST00000040182 Q3V0E1 1183 aa14.92□□□□□ -0.02
Ccdc88a-201ENSMUST00000040182 Bloc1s3Q5U5M8 195 aa14.92□□□□□ -0.02
Ccdc88a-201ENSMUST00000040182 Zfp30Q60585 533 aa14.92□□□□□ -0.02
Ccdc88a-201ENSMUST00000040182 Npy4rQ61041 375 aa14.92□□□□□ -0.02
Ccdc88a-201ENSMUST00000040182 Ip6k3Q8BWD2 396 aa14.92□□□□□ -0.02
Ccdc88a-201ENSMUST00000040182 Olfr51Q8VGG9 307 aa14.92□□□□□ -0.02
Ccdc88a-201ENSMUST00000040182 Tspo2Q9CRZ8 162 aa14.92□□□□□ -0.02
Ccdc88a-201ENSMUST00000040182 Gm10778A0A087WNP5 499 aa14.92□□□□□ -0.02
Ccdc88a-201ENSMUST00000040182 Tmem229aB9EJI9 371 aa14.92□□□□□ -0.02
Ccdc88a-201ENSMUST00000040182 Clec12bQ149M0 275 aa14.92□□□□□ -0.02
Ccdc88a-201ENSMUST00000040182 Defb25Q30KN8 71 aa14.92□□□□□ -0.02
Ccdc88a-201ENSMUST00000040182 Cdadc1Q8BMD5 523 aa14.92□□□□□ -0.02
Ccdc88a-201ENSMUST00000040182 Olfr486Q8VFD0 314 aa14.92□□□□□ -0.02
Ccdc88a-201ENSMUST00000040182 Nipsnap1O55125 284 aa14.92□□□□□ -0.02
Ccdc88a-201ENSMUST00000040182 Slc34a1Q60825 637 aa14.92□□□□□ -0.02
Ccdc88a-201ENSMUST00000040182 ZxdcQ8C8V1 858 aa14.92□□□□□ -0.02
Ccdc88a-201ENSMUST00000040182 Pdlim5Q8CI51 591 aaKnown RBP14.92□□□□□ -0.02
Ccdc88a-201ENSMUST00000040182 Olfr1238Q8VG59 315 aa14.92□□□□□ -0.02
Ccdc88a-201ENSMUST00000040182 Urm1Q9D2P4 101 aa14.92□□□□□ -0.02
Ccdc88a-201ENSMUST00000040182 Olfr545Q9WU94 316 aa14.92□□□□□ -0.02
Ccdc88a-201ENSMUST00000040182 Wdfy1E9Q4P1 410 aa14.92□□□□□ -0.02
Ccdc88a-201ENSMUST00000040182 Meox2P32443 303 aa14.92□□□□□ -0.02
Ccdc88a-201ENSMUST00000040182 Ube3dQ8BX13 368 aa14.92□□□□□ -0.02
Ccdc88a-201ENSMUST00000040182 Rpp21Q8R040 150 aa14.92□□□□□ -0.02
Ccdc88a-201ENSMUST00000040182 Reep6Q9JM62 201 aa14.92□□□□□ -0.02
Ccdc88a-201ENSMUST00000040182 Olfr1289A0A288CFY5 326 aa14.91□□□□□ -0.02
Ccdc88a-201ENSMUST00000040182 IcaQ9DBD0 700 aa14.91□□□□□ -0.02
Ccdc88a-201ENSMUST00000040182 Tmem27Q9ESG4 222 aa14.91□□□□□ -0.02
Ccdc88a-201ENSMUST00000040182 Zfp236S4R299 1847 aa14.91□□□□□ -0.02
Ccdc88a-201ENSMUST00000040182 Malrd1A2AJX4 2123 aa14.91□□□□□ -0.02
Ccdc88a-201ENSMUST00000040182 Taar9Q5QD04 348 aa14.91□□□□□ -0.02
Ccdc88a-201ENSMUST00000040182 Ldlrad4Q8BWJ4 306 aa14.91□□□□□ -0.02
Ccdc88a-201ENSMUST00000040182 Spint2Q9WU03 252 aa14.91□□□□□ -0.02
Ccdc88a-201ENSMUST00000040182 Gosr1O88630 250 aa14.91□□□□□ -0.02
Ccdc88a-201ENSMUST00000040182 Atp4bP50992 294 aa14.91□□□□□ -0.02
Ccdc88a-201ENSMUST00000040182 Sft2d2Q8VD57 159 aa14.91□□□□□ -0.02
Ccdc88a-201ENSMUST00000040182 Mrgprb5Q91ZB9 322 aa14.91□□□□□ -0.02
Ccdc88a-201ENSMUST00000040182 Olfr943Q9EQ92 314 aa14.91□□□□□ -0.02
Ccdc88a-201ENSMUST00000040182 Rnf165E9QAU8 347 aa14.91□□□□□ -0.02
Ccdc88a-201ENSMUST00000040182 Olfr578Q8VH17 313 aa14.91□□□□□ -0.02
Ccdc88a-201ENSMUST00000040182 Myo7bQ99MZ6 2113 aa14.91□□□□□ -0.02
Ccdc88a-201ENSMUST00000040182 Zfp334A2A4U6 679 aa14.91□□□□□ -0.02
Ccdc88a-201ENSMUST00000040182 Gm20821J3QPJ2 227 aa14.91□□□□□ -0.02
Ccdc88a-201ENSMUST00000040182 Itln1O88310 313 aa14.91□□□□□ -0.02
Ccdc88a-201ENSMUST00000040182 Tmem167bQ80X45 74 aa14.91□□□□□ -0.02
Ccdc88a-201ENSMUST00000040182 Olfr548-ps1A0A1B0GSG0 314 aa14.91□□□□□ -0.02
Ccdc88a-201ENSMUST00000040182 Rab24P35290 203 aa14.91□□□□□ -0.02
Ccdc88a-201ENSMUST00000040182 Fgf14P70379 247 aa14.91□□□□□ -0.02
Ccdc88a-201ENSMUST00000040182 Gm10644Q3TZG3 87 aa14.91□□□□□ -0.02
Ccdc88a-201ENSMUST00000040182 Emc6Q9CQW0 110 aa14.91□□□□□ -0.02
Ccdc88a-201ENSMUST00000040182 Mrps30Q9D0G0 442 aaKnown RBP14.91□□□□□ -0.02
Ccdc88a-201ENSMUST00000040182 Cldn20G5E8X0 219 aa14.91□□□□□ -0.02
Ccdc88a-201ENSMUST00000040182 Mdh2P08249 338 aaKnown RBP14.91□□□□□ -0.02
Ccdc88a-201ENSMUST00000040182 MpgQ04841 333 aaKnown RBP14.91□□□□□ -0.02
Ccdc88a-201ENSMUST00000040182 Olfr987Q7TRA2 309 aa14.91□□□□□ -0.02
Ccdc88a-201ENSMUST00000040182 Crb2Q80YA8 1282 aa14.91□□□□□ -0.02
Ccdc88a-201ENSMUST00000040182 Adipor1Q91VH1 375 aa14.91□□□□□ -0.02
Retrieved 100 of 22,080 RNA–protein pairs in 29.9 ms