RNA–Protein interactions for RNA: ENSMUST00000002708.4

Shh-201, Transcript of Sonic hedgehog protein, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Shh, Length 2,847 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Shh-201ENSMUST00000002708 Tomm40lQ9CZR3 308 aa14.35□□□□□ -0.11
Shh-201ENSMUST00000002708 Plekha3Q9ERS4 297 aa14.35□□□□□ -0.11
Shh-201ENSMUST00000002708 Zfhx2Q2MHN3 2562 aa14.35□□□□□ -0.11
Shh-201ENSMUST00000002708 Olfr1532-ps1A0A0R4J8U2 307 aa14.34□□□□□ -0.11
Shh-201ENSMUST00000002708 Rdh16f1E9Q9P8 317 aa14.34□□□□□ -0.11
Shh-201ENSMUST00000002708 Olfr707K7N662 307 aa14.34□□□□□ -0.11
Shh-201ENSMUST00000002708 P01795 144 aa14.34□□□□□ -0.11
Shh-201ENSMUST00000002708 Hspb1P14602 209 aaKnown RBP14.34□□□□□ -0.11
Shh-201ENSMUST00000002708 Atp4bP50992 294 aa14.34□□□□□ -0.11
Shh-201ENSMUST00000002708 Sox19Q62249 55 aa14.34□□□□□ -0.11
Shh-201ENSMUST00000002708 Sema6dQ76KF0 1073 aa14.34□□□□□ -0.11
Shh-201ENSMUST00000002708 Actrt3Q8BXF8 369 aa14.34□□□□□ -0.11
Shh-201ENSMUST00000002708 Rdh9Q8K5C8 317 aa14.34□□□□□ -0.11
Shh-201ENSMUST00000002708 Olfr1447Q8VFX3 309 aa14.34□□□□□ -0.11
Shh-201ENSMUST00000002708 Armc10Q9D0L7 306 aa14.34□□□□□ -0.11
Shh-201ENSMUST00000002708 Dnajc4Q9D844 244 aa14.34□□□□□ -0.11
Shh-201ENSMUST00000002708 Lyzl6Q9DA11 148 aa14.34□□□□□ -0.11
Shh-201ENSMUST00000002708 Q9DAE7 121 aa14.34□□□□□ -0.11
Shh-201ENSMUST00000002708 Cx3cr1Q9Z0D9 354 aa14.34□□□□□ -0.11
Shh-201ENSMUST00000002708 Ighv5-15A0A0A6YWC7 117 aa14.34□□□□□ -0.11
Shh-201ENSMUST00000002708 Olfr635K7N6B1 321 aa14.34□□□□□ -0.11
Shh-201ENSMUST00000002708 VegfdP97946 358 aa14.34□□□□□ -0.11
Shh-201ENSMUST00000002708 Tmem18Q3TUD9 140 aa14.34□□□□□ -0.11
Shh-201ENSMUST00000002708 Lhfpl4Q5U4E0 247 aa14.34□□□□□ -0.11
Shh-201ENSMUST00000002708 Zfp663Q6NXM6 656 aa14.34□□□□□ -0.11
Shh-201ENSMUST00000002708 Slc24a5Q8C261 501 aa14.34□□□□□ -0.11
Shh-201ENSMUST00000002708 Chrnb4Q8R493 495 aa14.34□□□□□ -0.11
Shh-201ENSMUST00000002708 Gpn1Q8VCE2 372 aa14.34□□□□□ -0.11
Shh-201ENSMUST00000002708 Mob1aQ921Y0 216 aa14.34□□□□□ -0.11
Shh-201ENSMUST00000002708 SlirpQ9D8T7 112 aaKnown RBP14.34□□□□□ -0.11
Shh-201ENSMUST00000002708 1700025F22RikQ9D9Y7 111 aa14.34□□□□□ -0.11
Shh-201ENSMUST00000002708 Gnpnat1Q9JK38 184 aa14.34□□□□□ -0.11
Shh-201ENSMUST00000002708 Vmn1r173E9Q8V7 313 aa14.33□□□□□ -0.11
Shh-201ENSMUST00000002708 Sh2b3O09039 548 aa14.33□□□□□ -0.11
Shh-201ENSMUST00000002708 P01658 132 aa14.33□□□□□ -0.11
Shh-201ENSMUST00000002708 PpiaP17742 164 aaKnown RBP14.33□□□□□ -0.11
Shh-201ENSMUST00000002708 Irf2P23906 349 aa14.33□□□□□ -0.11
Shh-201ENSMUST00000002708 Gal3st2cQ3ULK5 396 aa14.33□□□□□ -0.11
Shh-201ENSMUST00000002708 Repin1Q5U4E2 545 aa14.33□□□□□ -0.11
Shh-201ENSMUST00000002708 Zic4Q61467 341 aa14.33□□□□□ -0.11
Shh-201ENSMUST00000002708 Fam76bQ80XP8 339 aa14.33□□□□□ -0.11
Shh-201ENSMUST00000002708 Q8BN57 294 aa14.33□□□□□ -0.11
Shh-201ENSMUST00000002708 1810024B03RikQ8BWE1 200 aa14.33□□□□□ -0.11
Shh-201ENSMUST00000002708 Olfr133Q8VG94 312 aa14.33□□□□□ -0.11
Shh-201ENSMUST00000002708 Rcc1lQ9CYF5 461 aa14.33□□□□□ -0.11
Shh-201ENSMUST00000002708 Fam210bQ9D8B6 190 aa14.33□□□□□ -0.11
Shh-201ENSMUST00000002708 Dock10Q8BZN6 2150 aa14.33□□□□□ -0.12
Shh-201ENSMUST00000002708 Ighv1-42A0A0A6YY38 117 aa14.33□□□□□ -0.12
Shh-201ENSMUST00000002708 Olfr548-ps1A0A1B0GSG0 314 aa14.33□□□□□ -0.12
Shh-201ENSMUST00000002708 Gm438B1ASB3 393 aa14.33□□□□□ -0.12
Shh-201ENSMUST00000002708 Olfr125Q14AJ9 320 aa14.33□□□□□ -0.12
Shh-201ENSMUST00000002708 Olfr901Q7TRD1 311 aa14.33□□□□□ -0.12
Shh-201ENSMUST00000002708 Tsen54Q8C2A2 525 aa14.33□□□□□ -0.12
Shh-201ENSMUST00000002708 Cyb5bQ9CQX2 146 aaKnown RBP14.33□□□□□ -0.12
Shh-201ENSMUST00000002708 CsQ9CZU6 464 aaKnown RBP14.33□□□□□ -0.12
Shh-201ENSMUST00000002708 Rtl8cQ9D6I0 112 aa14.33□□□□□ -0.12
Shh-201ENSMUST00000002708 Tas2r4Q9JKT3 297 aa14.33□□□□□ -0.12
Shh-201ENSMUST00000002708 Prg4Q9JM99 1054 aa14.33□□□□□ -0.12
Shh-201ENSMUST00000002708 PrkacaP05132 351 aaKnown RBP14.33□□□□□ -0.12
Shh-201ENSMUST00000002708 Bmi1P25916 324 aa14.33□□□□□ -0.12
Shh-201ENSMUST00000002708 Eif1P48024 113 aaKnown RBP14.33□□□□□ -0.12
Shh-201ENSMUST00000002708 Sult4a1P63046 284 aa14.33□□□□□ -0.12
Shh-201ENSMUST00000002708 H2-T22Q31615 379 aa14.33□□□□□ -0.12
Shh-201ENSMUST00000002708 A3galt2Q3V1N9 370 aa14.33□□□□□ -0.12
Shh-201ENSMUST00000002708 Cdv3Q4VAA2 281 aaKnown RBP14.33□□□□□ -0.12
Shh-201ENSMUST00000002708 Gm14851Q5ERJ0 116 aa14.33□□□□□ -0.12
Shh-201ENSMUST00000002708 Foxf1Q61080 378 aa14.33□□□□□ -0.12
Shh-201ENSMUST00000002708 Vmn1r220Q8R272 298 aa14.33□□□□□ -0.12
Shh-201ENSMUST00000002708 Nmnat3Q99JR6 245 aa14.33□□□□□ -0.12
Shh-201ENSMUST00000002708 Opn4Q9QXZ9 521 aa14.33□□□□□ -0.12
Shh-201ENSMUST00000002708 Adam11Q9R1V4 773 aa14.33□□□□□ -0.12
Shh-201ENSMUST00000002708 Ighv1-78A0A0G2JGN3 117 aa14.32□□□□□ -0.12
Shh-201ENSMUST00000002708 Cldn34dA2AGU5 210 aa14.32□□□□□ -0.12
Shh-201ENSMUST00000002708 Olfr430E9Q5F1 317 aa14.32□□□□□ -0.12
Shh-201ENSMUST00000002708 Zfp688E9Q5M9 274 aa14.32□□□□□ -0.12
Shh-201ENSMUST00000002708 Efnb2P52800 336 aa14.32□□□□□ -0.12
Shh-201ENSMUST00000002708 Olfr331Q5NC44 324 aa14.32□□□□□ -0.12
Shh-201ENSMUST00000002708 Orm3Q63805 206 aa14.32□□□□□ -0.12
Shh-201ENSMUST00000002708 Olfr1477Q7TQQ7 315 aa14.32□□□□□ -0.12
Shh-201ENSMUST00000002708 Olfr1131Q7TR45 309 aa14.32□□□□□ -0.12
Shh-201ENSMUST00000002708 Spata2lQ8BNN1 426 aa14.32□□□□□ -0.12
Shh-201ENSMUST00000002708 4930451G09RikQ8C5G4 195 aa14.32□□□□□ -0.12
Shh-201ENSMUST00000002708 Olfr24Q8VFM9 313 aa14.32□□□□□ -0.12
Shh-201ENSMUST00000002708 Olfr114Q923Q8 312 aa14.32□□□□□ -0.12
Shh-201ENSMUST00000002708 Znf281Q99LI5 893 aa14.32□□□□□ -0.12
Shh-201ENSMUST00000002708 Rad1Q9QWZ1 280 aa14.32□□□□□ -0.12
Shh-201ENSMUST00000002708 Ighv6-5A0A0A6YWS9 119 aa14.32□□□□□ -0.12
Shh-201ENSMUST00000002708 4933408B17RikG3X9B4 273 aa14.32□□□□□ -0.12
Shh-201ENSMUST00000002708 Tbx15O70306 602 aa14.32□□□□□ -0.12
Shh-201ENSMUST00000002708 Olfr851Q7TRG0 312 aa14.32□□□□□ -0.12
Shh-201ENSMUST00000002708 Olfr774Q7TRI5 312 aa14.32□□□□□ -0.12
Shh-201ENSMUST00000002708 Tmem251Q8BH26 163 aa14.32□□□□□ -0.12
Shh-201ENSMUST00000002708 Csnk1a1Q8BK63 337 aaKnown RBP14.32□□□□□ -0.12
Shh-201ENSMUST00000002708 Fam180aQ8BR21 173 aa14.32□□□□□ -0.12
Shh-201ENSMUST00000002708 Vmn1r193Q8R258 319 aa14.32□□□□□ -0.12
Shh-201ENSMUST00000002708 B3gnt8Q8R3I9 389 aa14.32□□□□□ -0.12
Shh-201ENSMUST00000002708 Olfr1002Q8VFK2 318 aa14.32□□□□□ -0.12
Shh-201ENSMUST00000002708 Taf9Q8VI33 264 aa14.32□□□□□ -0.12
Shh-201ENSMUST00000002708 RbmxQ9WV02 391 aaKnown RBP14.32□□□□□ -0.12
Shh-201ENSMUST00000002708 Olfr1157A2AVC4 312 aa14.31□□□□□ -0.12
Retrieved 100 of 22,080 RNA–protein pairs in 39.8 ms