RNA–Protein interactions for RNA: ENST00000641947.1

PHGDH-232, Transcript of phosphoglycerate dehydrogenase, humanhuman

Gene PHGDH, Length 1,774 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDH-232ENST00000641947 CLEC18BQ6UXF7 455 aa14.63□□□□□ -0.07
PHGDH-232ENST00000641947 NLRC3Q7RTR2 1065 aa14.63□□□□□ -0.07
PHGDH-232ENST00000641947 ZNF561Q8N587 486 aa14.63□□□□□ -0.07
PHGDH-232ENST00000641947 RSRP1Q9BUV0 290 aa14.63□□□□□ -0.07
PHGDH-232ENST00000641947 DLL4Q9NR61 685 aa14.63□□□□□ -0.07
PHGDH-232ENST00000641947 CBLN4Q9NTU7 201 aa14.63□□□□□ -0.07
PHGDH-232ENST00000641947 C14orf166Q9Y224 244 aaKnown RBP14.63□□□□□ -0.07
PHGDH-232ENST00000641947 TACC2O95359 2948 aa14.63□□□□□ -0.07
PHGDH-232ENST00000641947 ODAMA1E959 279 aa14.62□□□□□ -0.07
PHGDH-232ENST00000641947 GOSR2O14653 212 aa14.62□□□□□ -0.07
PHGDH-232ENST00000641947 TNFRSF13BO14836 293 aaPredicted RBP14.62□□□□□ -0.07
PHGDH-232ENST00000641947 SFT2D2O95562 160 aa14.62□□□□□ -0.07
PHGDH-232ENST00000641947 ANXA3P12429 323 aa14.62□□□□□ -0.07
PHGDH-232ENST00000641947 COL8A2P25067 703 aa14.62□□□□□ -0.07
PHGDH-232ENST00000641947 CD34P28906 385 aa14.62□□□□□ -0.07
PHGDH-232ENST00000641947 UCP3P55916 312 aa14.62□□□□□ -0.07
PHGDH-232ENST00000641947 SRSF1Q07955 248 aaKnown RBP eCLIP14.62□□□□□ -0.072e-10■■■□□ 18.2
PHGDH-232ENST00000641947 LY6G6FQ5SQ64 297 aa14.62□□□□□ -0.07
PHGDH-232ENST00000641947 OR10J5Q8NHC4 309 aa14.62□□□□□ -0.07
PHGDH-232ENST00000641947 MGAT4AQ9UM21 535 aa14.62□□□□□ -0.07
PHGDH-232ENST00000641947 YLPM1P49750 1951 aaKnown RBP14.62□□□□□ -0.07
PHGDH-232ENST00000641947 PPIAL4EA0A075B759 164 aa14.62□□□□□ -0.07
PHGDH-232ENST00000641947 FAM172BPA6NC97 362 aa14.62□□□□□ -0.07
PHGDH-232ENST00000641947 PPIAL4DF5H284 164 aa14.62□□□□□ -0.07
PHGDH-232ENST00000641947 SIGLEC5O15389 551 aa14.62□□□□□ -0.07
PHGDH-232ENST00000641947 LY6HO94772 140 aa14.62□□□□□ -0.07
PHGDH-232ENST00000641947 DUS4LO95620 317 aaKnown RBP14.62□□□□□ -0.07
PHGDH-232ENST00000641947 HBZP02008 142 aa14.62□□□□□ -0.07
PHGDH-232ENST00000641947 PPIAL4FP0DN26 164 aa14.62□□□□□ -0.07
PHGDH-232ENST00000641947 GNRHRP30968 328 aa14.62□□□□□ -0.07
PHGDH-232ENST00000641947 P2RX3P56373 397 aa14.62□□□□□ -0.07
PHGDH-232ENST00000641947 PIGPP57054 158 aa14.62□□□□□ -0.07
PHGDH-232ENST00000641947 ANKRD55Q3KP44 614 aa14.62□□□□□ -0.07
PHGDH-232ENST00000641947 ZFP69Q49AA0 526 aa14.62□□□□□ -0.07
PHGDH-232ENST00000641947 PHLDA2Q53GA4 152 aa14.62□□□□□ -0.07
PHGDH-232ENST00000641947 TCF23Q7RTU1 214 aa14.62□□□□□ -0.07
PHGDH-232ENST00000641947 DTX2Q86UW9 622 aa14.62□□□□□ -0.07
PHGDH-232ENST00000641947 C1orf87Q8N0U7 546 aa14.62□□□□□ -0.07
PHGDH-232ENST00000641947 CHIAQ9BZP6 476 aa14.62□□□□□ -0.07
PHGDH-232ENST00000641947 ZNF665Q9H7R5 613 aa14.62□□□□□ -0.07
PHGDH-232ENST00000641947 SLC2A9Q9NRM0 540 aa14.62□□□□□ -0.07
PHGDH-232ENST00000641947 PPIAL4AQ9Y536 164 aa14.62□□□□□ -0.07
PHGDH-232ENST00000641947 CRYM-AS1A6NIL9 109 aa14.61□□□□□ -0.07
PHGDH-232ENST00000641947 A6NNC1 897 aa14.61□□□□□ -0.07
PHGDH-232ENST00000641947 C15orf65H3BRN8 121 aa14.61□□□□□ -0.07
PHGDH-232ENST00000641947 CCSO14618 274 aa14.61□□□□□ -0.07
PHGDH-232ENST00000641947 HEXAP06865 529 aa14.61□□□□□ -0.07
PHGDH-232ENST00000641947 GNMTQ14749 295 aa14.61□□□□□ -0.07
PHGDH-232ENST00000641947 Q5BKY6 102 aa14.61□□□□□ -0.07
PHGDH-232ENST00000641947 LYPD2Q6UXB3 125 aa14.61□□□□□ -0.07
PHGDH-232ENST00000641947 MEX3BQ6ZN04 569 aaKnown RBP14.61□□□□□ -0.07
PHGDH-232ENST00000641947 ZNF818PQ6ZRF7 136 aa14.61□□□□□ -0.07
PHGDH-232ENST00000641947 SLC38A6Q8IZM9 456 aa14.61□□□□□ -0.07
PHGDH-232ENST00000641947 ZFAND1Q8TCF1 268 aa14.61□□□□□ -0.07
PHGDH-232ENST00000641947 SECTM1Q8WVN6 248 aa14.61□□□□□ -0.07
PHGDH-232ENST00000641947 GPHA2Q96T91 129 aa14.61□□□□□ -0.07
PHGDH-232ENST00000641947 DOCK11Q5JSL3 2073 aa14.61□□□□□ -0.07
PHGDH-232ENST00000641947 ASH1LQ9NR48 2969 aaKnown RBP14.61□□□□□ -0.07
PHGDH-232ENST00000641947 TRAV38-1A0A0B4J264 116 aa14.6□□□□□ -0.07
PHGDH-232ENST00000641947 DBX1A6NMT0 343 aa14.6□□□□□ -0.07
PHGDH-232ENST00000641947 DIRAS3O95661 229 aa14.6□□□□□ -0.07
PHGDH-232ENST00000641947 EDDM3BP56851 147 aa14.6□□□□□ -0.07
PHGDH-232ENST00000641947 OR52L2PQ8NGH6 319 aa14.6□□□□□ -0.07
PHGDH-232ENST00000641947 PPP1R35Q8TAP8 253 aa14.6□□□□□ -0.07
PHGDH-232ENST00000641947 TRAF4Q9BUZ4 470 aaPredicted RBP14.6□□□□□ -0.07
PHGDH-232ENST00000641947 KCNIP1Q9NZI2 227 aa14.6□□□□□ -0.07
PHGDH-232ENST00000641947 OR2W1Q9Y3N9 320 aa14.6□□□□□ -0.07
PHGDH-232ENST00000641947 AKAP6Q13023 2319 aa14.6□□□□□ -0.07
PHGDH-232ENST00000641947 USF3Q68DE3 2245 aa14.6□□□□□ -0.07
PHGDH-232ENST00000641947 TMPRSS2O15393 492 aa14.6□□□□□ -0.07
PHGDH-232ENST00000641947 SLC22A5O76082 557 aa14.6□□□□□ -0.07
PHGDH-232ENST00000641947 OR2A4O95047 310 aa14.6□□□□□ -0.07
PHGDH-232ENST00000641947 C1QBP02746 253 aa14.6□□□□□ -0.07
PHGDH-232ENST00000641947 NOXA1Q86UR1 476 aa14.6□□□□□ -0.07
PHGDH-232ENST00000641947 RFESDQ8TAC1 157 aa14.6□□□□□ -0.07
PHGDH-232ENST00000641947 LURAP1Q96LR2 239 aa14.6□□□□□ -0.07
PHGDH-232ENST00000641947 OR2A7Q96R45 310 aa14.6□□□□□ -0.07
PHGDH-232ENST00000641947 CCL28Q9NRJ3 127 aa14.6□□□□□ -0.07
PHGDH-232ENST00000641947 RDH8Q9NYR8 311 aa14.6□□□□□ -0.07
PHGDH-232ENST00000641947 LAMP3Q9UQV4 416 aa14.6□□□□□ -0.07
PHGDH-232ENST00000641947 VPS13CQ709C8 3753 aa14.6□□□□□ -0.07
PHGDH-232ENST00000641947 RP2O75695 350 aa14.59□□□□□ -0.07
PHGDH-232ENST00000641947 IGLV2-14P01704 120 aa14.59□□□□□ -0.07
PHGDH-232ENST00000641947 CR1LQ2VPA4 569 aa14.59□□□□□ -0.07
PHGDH-232ENST00000641947 C6orf183Q5T699 404 aa14.59□□□□□ -0.07
PHGDH-232ENST00000641947 KCTD9Q7L273 389 aa14.59□□□□□ -0.07
PHGDH-232ENST00000641947 OR11H4Q8NGC9 324 aa14.59□□□□□ -0.07
PHGDH-232ENST00000641947 OR5M8Q8NGP6 311 aa14.59□□□□□ -0.07
PHGDH-232ENST00000641947 RTN4IP1Q8WWV3 396 aaPredicted RBP14.59□□□□□ -0.07
PHGDH-232ENST00000641947 ARL11Q969Q4 196 aa14.59□□□□□ -0.07
PHGDH-232ENST00000641947 PHB2Q99623 299 aa14.59□□□□□ -0.07
PHGDH-232ENST00000641947 TMEM246Q9BRR3 403 aa14.59□□□□□ -0.07
PHGDH-232ENST00000641947 SLC5A7Q9GZV3 580 aa14.59□□□□□ -0.07
PHGDH-232ENST00000641947 FAM234AQ9H0X4 552 aa14.59□□□□□ -0.07
PHGDH-232ENST00000641947 UBTD1Q9HAC8 227 aa14.59□□□□□ -0.07
PHGDH-232ENST00000641947 CTSZQ9UBR2 303 aa14.59□□□□□ -0.07
PHGDH-232ENST00000641947 LRRK2Q5S007 2527 aa14.59□□□□□ -0.07
PHGDH-232ENST00000641947 IGHV3-43A0A0B4J1X8 118 aa14.58□□□□□ -0.08
PHGDH-232ENST00000641947 HSD17B6O14756 317 aa14.58□□□□□ -0.08
PHGDH-232ENST00000641947 GIPP09681 153 aaPredicted RBP14.58□□□□□ -0.08
Retrieved 100 of 20,778 RNA–protein pairs in 40 ms