RNA–Protein interactions for RNA: ENST00000640289.1

GTF3A-209, Transcript of general transcription factor IIIA, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene GTF3A, Length 1,098 nt, Biotype protein coding, Subcellular localisation Cytosol, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3A-209ENST00000640289 ODF3BA8MYP8 253 aa10.74□□□□□ -0.69
GTF3A-209ENST00000640289 CTDSP2O14595 271 aa10.74□□□□□ -0.69
GTF3A-209ENST00000640289 SPINT2O43291 252 aa10.74□□□□□ -0.69
GTF3A-209ENST00000640289 ARG1P05089 322 aa10.74□□□□□ -0.69
GTF3A-209ENST00000640289 FCGR3AP08637 254 aa10.74□□□□□ -0.69
GTF3A-209ENST00000640289 ELK1P19419 428 aa10.74□□□□□ -0.69
GTF3A-209ENST00000640289 FPR2P25090 351 aa10.74□□□□□ -0.69
GTF3A-209ENST00000640289 SAA4P35542 130 aa10.74□□□□□ -0.69
GTF3A-209ENST00000640289 BPIFB3P59826 476 aa10.74□□□□□ -0.69
GTF3A-209ENST00000640289 MRPS15P82914 257 aaKnown RBP10.74□□□□□ -0.69
GTF3A-209ENST00000640289 MADCAM1Q13477 382 aa10.74□□□□□ -0.69
GTF3A-209ENST00000640289 HMGN3Q15651 99 aa10.74□□□□□ -0.69
GTF3A-209ENST00000640289 DEFB112Q30KQ8 113 aa10.74□□□□□ -0.69
GTF3A-209ENST00000640289 FOXB2Q5VYV0 432 aa10.74□□□□□ -0.69
GTF3A-209ENST00000640289 OR52W1Q6IF63 320 aa10.74□□□□□ -0.69
GTF3A-209ENST00000640289 TRAT1Q6PIZ9 186 aa10.74□□□□□ -0.69
GTF3A-209ENST00000640289 LHFPL4Q7Z7J7 247 aa10.74□□□□□ -0.69
GTF3A-209ENST00000640289 ABHD12Q8N2K0 398 aa10.74□□□□□ -0.69
GTF3A-209ENST00000640289 OR11H6Q8NGC7 330 aa10.74□□□□□ -0.69
GTF3A-209ENST00000640289 S100A16Q96FQ6 103 aaKnown RBP10.74□□□□□ -0.69
GTF3A-209ENST00000640289 DCUN1D5Q9BTE7 237 aa10.74□□□□□ -0.69
GTF3A-209ENST00000640289 CLEC7AQ9BXN2 247 aa10.74□□□□□ -0.69
GTF3A-209ENST00000640289 Q9N2K0 584 aa10.74□□□□□ -0.69
GTF3A-209ENST00000640289 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP10.74□□□□□ -0.69
GTF3A-209ENST00000640289 ZNRD1Q9P1U0 126 aa10.74□□□□□ -0.69
GTF3A-209ENST00000640289 ZNF230Q9UIE0 474 aaPredicted RBP10.74□□□□□ -0.69
GTF3A-209ENST00000640289 A0A087X0M5 115 aa10.73□□□□□ -0.69
GTF3A-209ENST00000640289 A0A0A6YYH2 397 aa10.73□□□□□ -0.69
GTF3A-209ENST00000640289 A0A1B0GX30 115 aa10.73□□□□□ -0.69
GTF3A-209ENST00000640289 A0A1W2PPE3 182 aa10.73□□□□□ -0.69
GTF3A-209ENST00000640289 A6NJ64 397 aa10.73□□□□□ -0.69
GTF3A-209ENST00000640289 FAM25AB3EWG3 89 aa10.73□□□□□ -0.69
GTF3A-209ENST00000640289 FAM25CB3EWG5 89 aa10.73□□□□□ -0.69
GTF3A-209ENST00000640289 FAM25GB3EWG6 89 aa10.73□□□□□ -0.69
GTF3A-209ENST00000640289 ZNF701M0R085 212 aaPredicted RBP10.73□□□□□ -0.69
GTF3A-209ENST00000640289 F2RL2O00254 374 aa10.73□□□□□ -0.69
GTF3A-209ENST00000640289 SDCBPO00560 298 aaPredicted RBP10.73□□□□□ -0.69
GTF3A-209ENST00000640289 XRCC3O43542 346 aa10.73□□□□□ -0.69
GTF3A-209ENST00000640289 SSX5O60225 188 aa10.73□□□□□ -0.69
GTF3A-209ENST00000640289 APOA1P02647 267 aa10.73□□□□□ -0.69
GTF3A-209ENST00000640289 GSTP1P09211 210 aaKnown RBP10.73□□□□□ -0.69
GTF3A-209ENST00000640289 PAX6P26367 422 aa10.73□□□□□ -0.69
GTF3A-209ENST00000640289 GNG10P50151 68 aa10.73□□□□□ -0.69
GTF3A-209ENST00000640289 LOXL3P58215 753 aa10.73□□□□□ -0.69
GTF3A-209ENST00000640289 HLA-DRB3P79483 266 aa10.73□□□□□ -0.69
GTF3A-209ENST00000640289 ARL6IP1Q15041 203 aa10.73□□□□□ -0.69
GTF3A-209ENST00000640289 TUSC1Q2TAM9 212 aa10.73□□□□□ -0.69
GTF3A-209ENST00000640289 LDLRAD2Q5SZI1 272 aa10.73□□□□□ -0.69
GTF3A-209ENST00000640289 HACD4Q5VWC8 232 aa10.73□□□□□ -0.69
GTF3A-209ENST00000640289 ZNF626Q68DY1 528 aa10.73□□□□□ -0.69
GTF3A-209ENST00000640289 MOB1BQ7L9L4 216 aa10.73□□□□□ -0.69
GTF3A-209ENST00000640289 SIGLECL1Q8N7X8 197 aa10.73□□□□□ -0.69
GTF3A-209ENST00000640289 OR10A7Q8NGE5 316 aa10.73□□□□□ -0.69
GTF3A-209ENST00000640289 OR52L2PQ8NGH6 319 aa10.73□□□□□ -0.69
GTF3A-209ENST00000640289 OR10V1Q8NGI7 309 aa10.73□□□□□ -0.69
GTF3A-209ENST00000640289 OR4P4Q8NGL7 312 aa10.73□□□□□ -0.69
GTF3A-209ENST00000640289 AJUBAQ96IF1 538 aa10.73□□□□□ -0.69
GTF3A-209ENST00000640289 CMTM3Q96MX0 182 aa10.73□□□□□ -0.69
GTF3A-209ENST00000640289 SLIRPQ9GZT3 109 aaKnown RBP10.73□□□□□ -0.69
GTF3A-209ENST00000640289 MIXL1Q9H2W2 232 aa10.73□□□□□ -0.69
GTF3A-209ENST00000640289 AUNIPQ9H7T9 357 aa10.73□□□□□ -0.69
GTF3A-209ENST00000640289 GFOD1Q9NXC2 390 aa10.73□□□□□ -0.69
GTF3A-209ENST00000640289 DSCAML1Q8TD84 2053 aa10.73□□□□□ -0.69
GTF3A-209ENST00000640289 IGKV1D-8A0A087WSZ0 117 aa10.72□□□□□ -0.69
GTF3A-209ENST00000640289 RGS5O15539 181 aa10.72□□□□□ -0.69
GTF3A-209ENST00000640289 SCTP09683 121 aa10.72□□□□□ -0.69
GTF3A-209ENST00000640289 CD34P28906 385 aa10.72□□□□□ -0.69
GTF3A-209ENST00000640289 TALDO1P37837 337 aa10.72□□□□□ -0.69
GTF3A-209ENST00000640289 LGALS4P56470 323 aa10.72□□□□□ -0.69
GTF3A-209ENST00000640289 TAS2R20P59543 309 aa10.72□□□□□ -0.69
GTF3A-209ENST00000640289 GNG2P59768 71 aa10.72□□□□□ -0.69
GTF3A-209ENST00000640289 SCGB2A2Q13296 93 aa10.72□□□□□ -0.69
GTF3A-209ENST00000640289 GNMTQ14749 295 aa10.72□□□□□ -0.69
GTF3A-209ENST00000640289 PNLIPRP3Q17RR3 467 aa10.72□□□□□ -0.69
GTF3A-209ENST00000640289 TMEM69Q5SWH9 247 aa10.72□□□□□ -0.69
GTF3A-209ENST00000640289 ZNF554Q86TJ5 538 aa10.72□□□□□ -0.69
GTF3A-209ENST00000640289 PRIMA1Q86XR5 153 aa10.72□□□□□ -0.69
GTF3A-209ENST00000640289 LAX1Q8IWV1 398 aa10.72□□□□□ -0.69
GTF3A-209ENST00000640289 DYNAPQ8N1N2 210 aa10.72□□□□□ -0.69
GTF3A-209ENST00000640289 IL1F10Q8WWZ1 152 aa10.72□□□□□ -0.69
GTF3A-209ENST00000640289 GCDHQ92947 438 aaPredicted RBP10.72□□□□□ -0.69
GTF3A-209ENST00000640289 GNG12Q9UBI6 72 aa10.72□□□□□ -0.69
GTF3A-209ENST00000640289 PSG11Q9UQ72 335 aa10.72□□□□□ -0.69
GTF3A-209ENST00000640289 MTORP42345 2549 aa10.72□□□□□ -0.69
GTF3A-209ENST00000640289 TRDCB7Z8K6 153 aa10.71□□□□□ -0.69
GTF3A-209ENST00000640289 TOR1AO14656 332 aa10.71□□□□□ -0.69
GTF3A-209ENST00000640289 CUBNO60494 3623 aa10.71□□□□□ -0.69
GTF3A-209ENST00000640289 IGLV1-47P01700 117 aa10.71□□□□□ -0.69
GTF3A-209ENST00000640289 MELTFP08582 738 aa10.71□□□□□ -0.69
GTF3A-209ENST00000640289 GSTT2P0CG29 244 aa10.71□□□□□ -0.69
GTF3A-209ENST00000640289 GSTT2BP0CG30 244 aa10.71□□□□□ -0.69
GTF3A-209ENST00000640289 MNDAP41218 407 aa10.71□□□□□ -0.69
GTF3A-209ENST00000640289 SRSF2Q01130 221 aaKnown RBP10.71□□□□□ -0.69
GTF3A-209ENST00000640289 HLA-DRB5Q30154 266 aa10.71□□□□□ -0.69
GTF3A-209ENST00000640289 MIDNQ504T8 468 aa10.71□□□□□ -0.69
GTF3A-209ENST00000640289 OR52M1Q8NGK5 317 aa10.71□□□□□ -0.69
GTF3A-209ENST00000640289 OR9G1Q8NH87 305 aa10.71□□□□□ -0.69
GTF3A-209ENST00000640289 GALMQ96C23 342 aa10.71□□□□□ -0.69
GTF3A-209ENST00000640289 DGCR14Q96DF8 476 aaKnown RBP10.71□□□□□ -0.69
GTF3A-209ENST00000640289 ST6GALNAC5Q9BVH7 336 aa10.71□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 69.7 ms