RNA–Protein interactions for RNA: ENST00000638794.1

SMN2-216, Transcript of survival of motor neuron 2, centromeric, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene SMN2, Length 846 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMN2-216ENST00000638794 PLSCR3Q9NRY6 295 aa13.25□□□□□ -0.29
SMN2-216ENST00000638794 SMPD3Q9NY59 655 aaPredicted RBP13.25□□□□□ -0.29
SMN2-216ENST00000638794 RCC2Q9P258 522 aaKnown RBP13.25□□□□□ -0.29
SMN2-216ENST00000638794 CLEC2DQ9UHP7 191 aa13.25□□□□□ -0.29
SMN2-216ENST00000638794 RYR3Q15413 4870 aa13.25□□□□□ -0.29
SMN2-216ENST00000638794 TRAV8-7A0A075B6U6 113 aa13.24□□□□□ -0.29
SMN2-216ENST00000638794 TRBV5-5A0A0J9YX44 114 aa13.24□□□□□ -0.29
SMN2-216ENST00000638794 C12orf77C9JDV5 145 aa13.24□□□□□ -0.29
SMN2-216ENST00000638794 MYL12AP19105 171 aa13.24□□□□□ -0.29
SMN2-216ENST00000638794 CD1BP29016 333 aa13.24□□□□□ -0.29
SMN2-216ENST00000638794 PNLIPRP3Q17RR3 467 aa13.24□□□□□ -0.29
SMN2-216ENST00000638794 DEFB136Q30KP8 78 aa13.24□□□□□ -0.29
SMN2-216ENST00000638794 Q3ZCU0 254 aa13.24□□□□□ -0.29
SMN2-216ENST00000638794 DMKNQ6E0U4 476 aaPredicted RBP13.24□□□□□ -0.29
SMN2-216ENST00000638794 STX19Q8N4C7 294 aa13.24□□□□□ -0.29
SMN2-216ENST00000638794 ZNF439Q8NDP4 499 aa13.24□□□□□ -0.29
SMN2-216ENST00000638794 RBMXL1Q96E39 390 aaKnown RBP13.24□□□□□ -0.29
SMN2-216ENST00000638794 S1PR3Q99500 378 aa13.24□□□□□ -0.29
SMN2-216ENST00000638794 DCLRE1BQ9H816 532 aa13.24□□□□□ -0.29
SMN2-216ENST00000638794 DIMT1Q9UNQ2 313 aaKnown RBP13.24□□□□□ -0.29
SMN2-216ENST00000638794 IRGMA1A4Y4 181 aa13.23□□□□□ -0.29
SMN2-216ENST00000638794 CCL24O00175 119 aa13.23□□□□□ -0.29
SMN2-216ENST00000638794 GPX5O75715 221 aa13.23□□□□□ -0.29
SMN2-216ENST00000638794 MOSP00540 346 aa13.23□□□□□ -0.29
SMN2-216ENST00000638794 ZNF134P52741 427 aa13.23□□□□□ -0.29
SMN2-216ENST00000638794 RAB25P57735 213 aa13.23□□□□□ -0.29
SMN2-216ENST00000638794 RPS11P62280 158 aaKnown RBP eCLIP13.23□□□□□ -0.29
SMN2-216ENST00000638794 GPR50Q13585 617 aa13.23□□□□□ -0.29
SMN2-216ENST00000638794 Q499Y3 187 aa13.23□□□□□ -0.29
SMN2-216ENST00000638794 YIF1BQ5BJH7 314 aa13.23□□□□□ -0.29
SMN2-216ENST00000638794 SYT6Q5T7P8 510 aaPredicted RBP13.23□□□□□ -0.29
SMN2-216ENST00000638794 UNQ9370/PRO34162Q6UXP9 181 aa13.23□□□□□ -0.29
SMN2-216ENST00000638794 SLC25A48Q6ZT89 311 aaKnown RBP13.23□□□□□ -0.29
SMN2-216ENST00000638794 ZFP41Q8N8Y5 198 aa13.23□□□□□ -0.29
SMN2-216ENST00000638794 MUL1Q969V5 352 aa13.23□□□□□ -0.29
SMN2-216ENST00000638794 PGLYRP3Q96LB9 341 aa13.23□□□□□ -0.29
SMN2-216ENST00000638794 RDH12Q96NR8 316 aa13.23□□□□□ -0.29
SMN2-216ENST00000638794 GON7Q9BXV9 100 aa13.23□□□□□ -0.29
SMN2-216ENST00000638794 SPACA1Q9HBV2 294 aa13.23□□□□□ -0.29
SMN2-216ENST00000638794 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP13.23□□□□□ -0.29
SMN2-216ENST00000638794 CKLFQ9UBR5 152 aa13.23□□□□□ -0.29
SMN2-216ENST00000638794 EXOSC1Q9Y3B2 195 aaKnown RBP13.23□□□□□ -0.29
SMN2-216ENST00000638794 MCRIP1C9JLW8 97 aa13.22□□□□□ -0.29
SMN2-216ENST00000638794 SPINT2O43291 252 aa13.22□□□□□ -0.29
SMN2-216ENST00000638794 BAG2O95816 211 aa13.22□□□□□ -0.29
SMN2-216ENST00000638794 FSTP19883 344 aa13.22□□□□□ -0.29
SMN2-216ENST00000638794 ZNF137PP52743 207 aa13.22□□□□□ -0.29
SMN2-216ENST00000638794 DGCR2P98153 550 aa13.22□□□□□ -0.29
SMN2-216ENST00000638794 FOXE3Q13461 319 aa13.22□□□□□ -0.29
SMN2-216ENST00000638794 GPR176Q14439 515 aa13.22□□□□□ -0.29
SMN2-216ENST00000638794 CXorf66Q5JRM2 361 aaPredicted RBP13.22□□□□□ -0.29
SMN2-216ENST00000638794 RAB12Q6IQ22 244 aa13.22□□□□□ -0.29
SMN2-216ENST00000638794 GLIPR1L1Q6UWM5 242 aa13.22□□□□□ -0.29
SMN2-216ENST00000638794 PRR18Q8N4B5 295 aa13.22□□□□□ -0.29
SMN2-216ENST00000638794 JAGN1Q8N5M9 183 aa13.22□□□□□ -0.29
SMN2-216ENST00000638794 FAM71E2Q8N5Q1 922 aa13.22□□□□□ -0.29
SMN2-216ENST00000638794 RNF152Q8N8N0 203 aa13.22□□□□□ -0.29
SMN2-216ENST00000638794 OR10V1Q8NGI7 309 aa13.22□□□□□ -0.29
SMN2-216ENST00000638794 OR4K15Q8NH41 348 aa13.22□□□□□ -0.29
SMN2-216ENST00000638794 OR1L1Q8NH94 360 aa13.22□□□□□ -0.29
SMN2-216ENST00000638794 TFAP2CQ92754 450 aa13.22□□□□□ -0.29
SMN2-216ENST00000638794 OR14A2Q96R54 314 aa13.22□□□□□ -0.29
SMN2-216ENST00000638794 RASL11BQ9BPW5 248 aa13.22□□□□□ -0.29
SMN2-216ENST00000638794 HSPB9Q9BQS6 159 aa13.22□□□□□ -0.29
SMN2-216ENST00000638794 ETAA1Q9NY74 926 aa13.22□□□□□ -0.29
SMN2-216ENST00000638794 GNG12Q9UBI6 72 aa13.22□□□□□ -0.29
SMN2-216ENST00000638794 TRAPPC2LQ9UL33 140 aa13.22□□□□□ -0.29
SMN2-216ENST00000638794 MRPS28Q9Y2Q9 187 aaKnown RBP13.22□□□□□ -0.29
SMN2-216ENST00000638794 A0A1W2PPK0 400 aa13.21□□□□□ -0.29
SMN2-216ENST00000638794 TXNL1O43396 289 aa13.21□□□□□ -0.29
SMN2-216ENST00000638794 RRP9O43818 475 aaKnown RBP13.21□□□□□ -0.29
SMN2-216ENST00000638794 VHLP40337 213 aa13.21□□□□□ -0.29
SMN2-216ENST00000638794 CDX1P47902 265 aaPredicted RBP13.21□□□□□ -0.29
SMN2-216ENST00000638794 LUMP51884 338 aaPredicted RBP13.21□□□□□ -0.29
SMN2-216ENST00000638794 F2RL1P55085 397 aa13.21□□□□□ -0.29
SMN2-216ENST00000638794 CFHR3Q02985 330 aa13.21□□□□□ -0.29
SMN2-216ENST00000638794 DCTN2Q13561 401 aaKnown RBP13.21□□□□□ -0.29
SMN2-216ENST00000638794 CT45A1Q5HYN5 189 aa13.21□□□□□ -0.29
SMN2-216ENST00000638794 C6orf183Q5T699 404 aa13.21□□□□□ -0.29
SMN2-216ENST00000638794 GAPTQ8N292 157 aa13.21□□□□□ -0.29
SMN2-216ENST00000638794 ZNF485Q8NCK3 441 aa13.21□□□□□ -0.29
SMN2-216ENST00000638794 OR8H1Q8NGG4 311 aa13.21□□□□□ -0.29
SMN2-216ENST00000638794 OR8U1Q8NH10 309 aa13.21□□□□□ -0.29
SMN2-216ENST00000638794 CT45A3Q8NHU0 189 aa13.21□□□□□ -0.29
SMN2-216ENST00000638794 MRPS24Q96EL2 167 aaKnown RBP13.21□□□□□ -0.29
SMN2-216ENST00000638794 TMEM80Q96HE8 168 aa13.21□□□□□ -0.29
SMN2-216ENST00000638794 CYYR1Q96J86 154 aa13.21□□□□□ -0.29
SMN2-216ENST00000638794 RAB9BQ9NP90 201 aa13.21□□□□□ -0.29
SMN2-216ENST00000638794 TRBV5-7A0A0A0MS05 114 aa13.2□□□□□ -0.3
SMN2-216ENST00000638794 HBZP02008 142 aa13.2□□□□□ -0.3
SMN2-216ENST00000638794 ELANEP08246 267 aa13.2□□□□□ -0.3
SMN2-216ENST00000638794 RCC1P18754 421 aaPredicted RBP13.2□□□□□ -0.3
SMN2-216ENST00000638794 SOX6P35712 828 aa13.2□□□□□ -0.3
SMN2-216ENST00000638794 GP2P55259 537 aaKnown RBP13.2□□□□□ -0.3
SMN2-216ENST00000638794 KIR2DS1Q14954 304 aa13.2□□□□□ -0.3
SMN2-216ENST00000638794 TMEM30BQ3MIR4 351 aa13.2□□□□□ -0.3
SMN2-216ENST00000638794 AWAT2Q6E213 333 aa13.2□□□□□ -0.3
SMN2-216ENST00000638794 BANF2Q9H503 90 aa13.2□□□□□ -0.3
SMN2-216ENST00000638794 CHCHD3Q9NX63 227 aaKnown RBP13.2□□□□□ -0.3
SMN2-216ENST00000638794 ZMAT5Q9UDW3 170 aaKnown RBP13.2□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 51.2 ms