RNA–Protein interactions for RNA: ENST00000638536.1

SCN1B-206, Transcript of sodium voltage-gated channel beta subunit 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SCN1B, Length 1,600 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN1B-206ENST00000638536 OR1L1Q8NH94 360 aa17.56■□□□□ 0.4
SCN1B-206ENST00000638536 LIN7BQ9HAP6 207 aa17.56■□□□□ 0.4
SCN1B-206ENST00000638536 DPM3Q9P2X0 92 aa17.56■□□□□ 0.4
SCN1B-206ENST00000638536 BTBD17A6NE02 478 aa17.55■□□□□ 0.4
SCN1B-206ENST00000638536 LY6LH3BQJ8 138 aa17.55■□□□□ 0.4
SCN1B-206ENST00000638536 BUB1B-PAK6H3BSN5 160 aa17.55■□□□□ 0.4
SCN1B-206ENST00000638536 J3QR06 171 aa17.55■□□□□ 0.4
SCN1B-206ENST00000638536 MXD1Q05195 221 aa17.55■□□□□ 0.4
SCN1B-206ENST00000638536 DIAPH2-AS1Q14236 149 aa17.55■□□□□ 0.4
SCN1B-206ENST00000638536 AANATQ16613 207 aa17.55■□□□□ 0.4
SCN1B-206ENST00000638536 MOGAT2Q3SYC2 334 aa17.55■□□□□ 0.4
SCN1B-206ENST00000638536 FBLN7Q53RD9 439 aa17.55■□□□□ 0.4
SCN1B-206ENST00000638536 PRR18Q8N4B5 295 aa17.55■□□□□ 0.4
SCN1B-206ENST00000638536 OR9G1Q8NH87 305 aa17.55■□□□□ 0.4
SCN1B-206ENST00000638536 ZNF596Q8TC21 504 aa17.55■□□□□ 0.4
SCN1B-206ENST00000638536 YIPF6Q96EC8 236 aa17.55■□□□□ 0.4
SCN1B-206ENST00000638536 HDHD3Q9BSH5 251 aaPredicted RBP17.55■□□□□ 0.4
SCN1B-206ENST00000638536 URM1Q9BTM9 101 aaKnown RBP17.55■□□□□ 0.4
SCN1B-206ENST00000638536 MBNL3Q9NUK0 354 aaKnown RBP17.55■□□□□ 0.4
SCN1B-206ENST00000638536 PLEKHJ1Q9NW61 149 aa17.55■□□□□ 0.4
SCN1B-206ENST00000638536 TOR1AO14656 332 aa17.54■□□□□ 0.4
SCN1B-206ENST00000638536 CA11O75493 328 aa17.54■□□□□ 0.4
SCN1B-206ENST00000638536 HBZP02008 142 aa17.54■□□□□ 0.4
SCN1B-206ENST00000638536 CRYBA1P05813 215 aa17.54■□□□□ 0.4
SCN1B-206ENST00000638536 FOXL1Q12952 345 aa17.54■□□□□ 0.4
SCN1B-206ENST00000638536 PLAC9Q5JTB6 97 aa17.54■□□□□ 0.4
SCN1B-206ENST00000638536 OLFML2AQ68BL7 652 aa17.54■□□□□ 0.4
SCN1B-206ENST00000638536 OR10A7Q8NGE5 316 aa17.54■□□□□ 0.4
SCN1B-206ENST00000638536 ARHGAP5-AS1Q96IT6 56 aa17.54■□□□□ 0.4
SCN1B-206ENST00000638536 KCTD7Q96MP8 289 aa17.54■□□□□ 0.4
SCN1B-206ENST00000638536 F2RL2O00254 374 aa17.54■□□□□ 0.4
SCN1B-206ENST00000638536 SDCBPO00560 298 aaPredicted RBP17.54■□□□□ 0.4
SCN1B-206ENST00000638536 CHST1O43916 411 aa17.54■□□□□ 0.4
SCN1B-206ENST00000638536 SMIM18P0DKX4 95 aa17.54■□□□□ 0.4
SCN1B-206ENST00000638536 CD24P25063 80 aa17.54■□□□□ 0.4
SCN1B-206ENST00000638536 MMP28Q9H239 520 aa17.54■□□□□ 0.4
SCN1B-206ENST00000638536 TAF9BQ9HBM6 251 aa17.54■□□□□ 0.4
SCN1B-206ENST00000638536 GFOD1Q9NXC2 390 aa17.54■□□□□ 0.4
SCN1B-206ENST00000638536 AK3Q9UIJ7 227 aa17.54■□□□□ 0.4
SCN1B-206ENST00000638536 NOTOA8MTQ0 251 aa17.53■□□□□ 0.4
SCN1B-206ENST00000638536 PRRX1P54821 245 aa17.53■□□□□ 0.4
SCN1B-206ENST00000638536 RAG2P55895 527 aa17.53■□□□□ 0.4
SCN1B-206ENST00000638536 Q6ZSV7 163 aa17.53■□□□□ 0.4
SCN1B-206ENST00000638536 TMEM219Q86XT9 240 aa17.53■□□□□ 0.4
SCN1B-206ENST00000638536 RAB22AQ9UL26 194 aa17.53■□□□□ 0.4
SCN1B-206ENST00000638536 H3BUI4 141 aa17.52■□□□□ 0.4
SCN1B-206ENST00000638536 NAPSAO96009 420 aa17.52■□□□□ 0.4
SCN1B-206ENST00000638536 TPTE2P1Q5T6R2 138 aa17.52■□□□□ 0.4
SCN1B-206ENST00000638536 GDPGP1Q6ZNW5 385 aa17.52■□□□□ 0.4
SCN1B-206ENST00000638536 TPRA1Q86W33 373 aa17.52■□□□□ 0.4
SCN1B-206ENST00000638536 OR10V1Q8NGI7 309 aa17.52■□□□□ 0.4
SCN1B-206ENST00000638536 PECRQ9BY49 303 aa17.52■□□□□ 0.4
SCN1B-206ENST00000638536 KCNK7Q9Y2U2 307 aa17.52■□□□□ 0.4
SCN1B-206ENST00000638536 LEUTXA8MZ59 168 aa17.51■□□□□ 0.39
SCN1B-206ENST00000638536 SLC31A2O15432 143 aa17.51■□□□□ 0.39
SCN1B-206ENST00000638536 ZNF134P52741 427 aa17.51■□□□□ 0.39
SCN1B-206ENST00000638536 C6orf183Q5T699 404 aa17.51■□□□□ 0.39
SCN1B-206ENST00000638536 Q6ZTK2 550 aa17.51■□□□□ 0.39
SCN1B-206ENST00000638536 OR52M1Q8NGK5 317 aa17.51■□□□□ 0.39
SCN1B-206ENST00000638536 DAPK2Q9UIK4 370 aa17.51■□□□□ 0.39
SCN1B-206ENST00000638536 TCF19Q9Y242 345 aa17.51■□□□□ 0.39
SCN1B-206ENST00000638536 NDUFA7O95182 113 aa17.5■□□□□ 0.39
SCN1B-206ENST00000638536 SNRPBP14678 240 aaKnown RBP17.5■□□□□ 0.39
SCN1B-206ENST00000638536 RPL15P61313 204 aaKnown RBP17.5■□□□□ 0.39
SCN1B-206ENST00000638536 LSM3P62310 102 aaKnown RBP17.5■□□□□ 0.39
SCN1B-206ENST00000638536 GNMTQ14749 295 aa17.5■□□□□ 0.39
SCN1B-206ENST00000638536 DHRS7BQ6IAN0 325 aaPredicted RBP17.5■□□□□ 0.39
SCN1B-206ENST00000638536 SFXN4Q6P4A7 337 aa17.5■□□□□ 0.39
SCN1B-206ENST00000638536 ZNF880Q6PDB4 577 aa17.5■□□□□ 0.39
SCN1B-206ENST00000638536 OR52L2PQ8NGH6 319 aa17.5■□□□□ 0.39
SCN1B-206ENST00000638536 HSF4Q9ULV5 492 aa17.5■□□□□ 0.39
SCN1B-206ENST00000638536 A6NDX4 124 aa17.5■□□□□ 0.39
SCN1B-206ENST00000638536 RAB27BO00194 218 aa17.5■□□□□ 0.39
SCN1B-206ENST00000638536 SPINT2O43291 252 aa17.5■□□□□ 0.39
SCN1B-206ENST00000638536 DYNLT3P51808 116 aa17.5■□□□□ 0.39
SCN1B-206ENST00000638536 C3orf56Q8N813 242 aa17.5■□□□□ 0.39
SCN1B-206ENST00000638536 OR56B1Q8NGI3 324 aa17.5■□□□□ 0.39
SCN1B-206ENST00000638536 LINC01006Q8NI28 216 aa17.5■□□□□ 0.39
SCN1B-206ENST00000638536 VCX3AQ9NNX9 186 aa17.5■□□□□ 0.39
SCN1B-206ENST00000638536 ABCB10Q9NRK6 738 aa17.5■□□□□ 0.39
SCN1B-206ENST00000638536 SRSF4Q08170 494 aaKnown RBP17.49■□□□□ 0.39
SCN1B-206ENST00000638536 SLC16A12Q6ZSM3 486 aa17.49■□□□□ 0.39
SCN1B-206ENST00000638536 ZNF439Q8NDP4 499 aa17.49■□□□□ 0.39
SCN1B-206ENST00000638536 CMYA5Q8N3K9 4069 aa17.49■□□□□ 0.39
SCN1B-206ENST00000638536 AIREO43918 545 aa17.48■□□□□ 0.39
SCN1B-206ENST00000638536 RAB6AP20340 208 aa17.48■□□□□ 0.39
SCN1B-206ENST00000638536 HMGN3Q15651 99 aa17.48■□□□□ 0.39
SCN1B-206ENST00000638536 CT45A1Q5HYN5 189 aa17.48■□□□□ 0.39
SCN1B-206ENST00000638536 OR10R2Q8NGX6 335 aa17.48■□□□□ 0.39
SCN1B-206ENST00000638536 OR4F5Q8NH21 305 aa17.48■□□□□ 0.39
SCN1B-206ENST00000638536 CT45A3Q8NHU0 189 aa17.48■□□□□ 0.39
SCN1B-206ENST00000638536 SETD6Q8TBK2 473 aa17.48■□□□□ 0.39
SCN1B-206ENST00000638536 RBMXL1Q96E39 390 aaKnown RBP17.48■□□□□ 0.39
SCN1B-206ENST00000638536 CHMP1AQ9HD42 196 aaPredicted RBP17.48■□□□□ 0.39
SCN1B-206ENST00000638536 KCNIP1Q9NZI2 227 aa17.48■□□□□ 0.39
SCN1B-206ENST00000638536 GNG12Q9UBI6 72 aa17.48■□□□□ 0.39
SCN1B-206ENST00000638536 ELF5Q9UKW6 265 aaPredicted RBP17.48■□□□□ 0.39
SCN1B-206ENST00000638536 SIGLEC9Q9Y336 463 aa17.48■□□□□ 0.39
SCN1B-206ENST00000638536 GNB3P16520 340 aa17.47■□□□□ 0.39
SCN1B-206ENST00000638536 TRAT1Q6PIZ9 186 aa17.47■□□□□ 0.39
Retrieved 100 of 20,778 RNA–protein pairs in 62.3 ms