RNA–Protein interactions for RNA: ENST00000638011.1

UBE3A-227, Transcript of ubiquitin protein ligase E3A, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene UBE3A, Length 8,742 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3A-227ENST00000638011 ZNF735P0CB33 412 aa13.37□□□□□ -0.27
UBE3A-227ENST00000638011 ZNF519Q8TB69 540 aa13.37□□□□□ -0.27
UBE3A-227ENST00000638011 SPAG8Q99932 426 aaPredicted RBP13.37□□□□□ -0.27
UBE3A-227ENST00000638011 TMEM30AQ9NV96 361 aa13.37□□□□□ -0.27
UBE3A-227ENST00000638011 AGAP20933 346 aa13.37□□□□□ -0.27
UBE3A-227ENST00000638011 UBE2L6O14933 153 aa13.37□□□□□ -0.27
UBE3A-227ENST00000638011 THOC3Q96J01 351 aaKnown RBP13.37□□□□□ -0.27
UBE3A-227ENST00000638011 TSPAN32Q96QS1 320 aa13.37□□□□□ -0.27
UBE3A-227ENST00000638011 A0A1B0GW15 77 aa13.37□□□□□ -0.27
UBE3A-227ENST00000638011 MRPL52Q86TS9 123 aaKnown RBP13.37□□□□□ -0.27
UBE3A-227ENST00000638011 KISS1RQ969F8 398 aaPredicted RBP13.37□□□□□ -0.27
UBE3A-227ENST00000638011 KIR2DL4Q99706 377 aa13.37□□□□□ -0.27
UBE3A-227ENST00000638011 MRPL18Q9H0U6 180 aaKnown RBP13.37□□□□□ -0.27
UBE3A-227ENST00000638011 SBF2Q86WG5 1849 aa13.37□□□□□ -0.27
UBE3A-227ENST00000638011 CDKN3Q16667 212 aa13.37□□□□□ -0.27
UBE3A-227ENST00000638011 TOX2Q96NM4 488 aa13.37□□□□□ -0.27
UBE3A-227ENST00000638011 WDR13Q9H1Z4 485 aa13.37□□□□□ -0.27
UBE3A-227ENST00000638011 MPC1Q9Y5U8 109 aa13.37□□□□□ -0.27
UBE3A-227ENST00000638011 S1PR2O95136 353 aa13.37□□□□□ -0.27
UBE3A-227ENST00000638011 MYBPHQ13203 477 aa13.36□□□□□ -0.27
UBE3A-227ENST00000638011 ZFAND6Q6FIF0 208 aa13.36□□□□□ -0.27
UBE3A-227ENST00000638011 LYG1Q8N1E2 194 aa13.36□□□□□ -0.27
UBE3A-227ENST00000638011 CA1P00915 261 aaPredicted RBP13.36□□□□□ -0.27
UBE3A-227ENST00000638011 SEMG1P04279 462 aa13.36□□□□□ -0.27
UBE3A-227ENST00000638011 OR10D3Q8NH80 312 aa13.36□□□□□ -0.27
UBE3A-227ENST00000638011 CRYGNQ8WXF5 182 aa13.36□□□□□ -0.27
UBE3A-227ENST00000638011 HHIPQ96QV1 700 aa13.36□□□□□ -0.27
UBE3A-227ENST00000638011 SPCS1Q9Y6A9 102 aa13.36□□□□□ -0.27
UBE3A-227ENST00000638011 QSER1Q2KHR3 1735 aa13.36□□□□□ -0.27
UBE3A-227ENST00000638011 OR11H12B2RN74 326 aa13.36□□□□□ -0.27
UBE3A-227ENST00000638011 CD74P04233 296 aa13.36□□□□□ -0.27
UBE3A-227ENST00000638011 ZNF250P15622 560 aa13.36□□□□□ -0.27
UBE3A-227ENST00000638011 FZD5Q13467 585 aa13.36□□□□□ -0.27
UBE3A-227ENST00000638011 FAM53AQ6NSI3 398 aaPredicted RBP13.36□□□□□ -0.27
UBE3A-227ENST00000638011 LRRTM3Q86VH5 581 aa13.36□□□□□ -0.27
UBE3A-227ENST00000638011 OR11H1Q8NG94 326 aa13.36□□□□□ -0.27
UBE3A-227ENST00000638011 OR11H7Q8NGC8 314 aa13.36□□□□□ -0.27
UBE3A-227ENST00000638011 OR11H2Q8NH07 326 aa13.36□□□□□ -0.27
UBE3A-227ENST00000638011 CAMTA1Q9Y6Y1 1673 aa13.36□□□□□ -0.27
UBE3A-227ENST00000638011 CDK2AP1O14519 115 aa13.36□□□□□ -0.27
UBE3A-227ENST00000638011 INSM1Q01101 510 aaPredicted RBP13.36□□□□□ -0.27
UBE3A-227ENST00000638011 KLF9Q13886 244 aaPredicted RBP13.36□□□□□ -0.27
UBE3A-227ENST00000638011 LINC01559Q495D7 138 aa13.36□□□□□ -0.27
UBE3A-227ENST00000638011 C4orf45Q96LM5 186 aa13.36□□□□□ -0.27
UBE3A-227ENST00000638011 PLXND1Q9Y4D7 1925 aa13.36□□□□□ -0.27
UBE3A-227ENST00000638011 SIPA1L3O60292 1781 aaPredicted RBP13.36□□□□□ -0.27
UBE3A-227ENST00000638011 ICOSLGO75144 302 aa13.36□□□□□ -0.27
UBE3A-227ENST00000638011 CD1BP29016 333 aa13.36□□□□□ -0.27
UBE3A-227ENST00000638011 CCL14Q16627 93 aa13.36□□□□□ -0.27
UBE3A-227ENST00000638011 R3HDM4Q96D70 268 aa13.36□□□□□ -0.27
UBE3A-227ENST00000638011 PPYP01298 95 aa13.36□□□□□ -0.27
UBE3A-227ENST00000638011 C16orf52Q8NHV5 167 aa13.36□□□□□ -0.27
UBE3A-227ENST00000638011 ZNF775Q96BV0 537 aaPredicted RBP13.36□□□□□ -0.27
UBE3A-227ENST00000638011 TWSG1Q9GZX9 223 aa13.36□□□□□ -0.27
UBE3A-227ENST00000638011 AUP1Q9Y679 476 aa13.36□□□□□ -0.27
UBE3A-227ENST00000638011 A0A1B0GWB2 263 aa13.36□□□□□ -0.27
UBE3A-227ENST00000638011 FXYD1O00168 92 aa13.36□□□□□ -0.27
UBE3A-227ENST00000638011 WDR38Q5JTN6 314 aa13.36□□□□□ -0.27
UBE3A-227ENST00000638011 TMEM190Q8WZ59 177 aa13.36□□□□□ -0.27
UBE3A-227ENST00000638011 HES7Q9BYE0 225 aa13.36□□□□□ -0.27
UBE3A-227ENST00000638011 TPSD1Q9BZJ3 242 aa13.36□□□□□ -0.27
UBE3A-227ENST00000638011 MMP25Q9NPA2 562 aa13.36□□□□□ -0.27
UBE3A-227ENST00000638011 BTAF1O14981 1849 aa13.35□□□□□ -0.27
UBE3A-227ENST00000638011 WTIPA6NIX2 430 aaPredicted RBP13.35□□□□□ -0.27
UBE3A-227ENST00000638011 MUC1P15941 1255 aaPredicted RBP13.35□□□□□ -0.27
UBE3A-227ENST00000638011 ZNF414Q96IQ9 312 aa13.35□□□□□ -0.27
UBE3A-227ENST00000638011 CISD1Q9NZ45 108 aaKnown RBP13.35□□□□□ -0.27
UBE3A-227ENST00000638011 TUBD1Q9UJT1 453 aa13.35□□□□□ -0.27
UBE3A-227ENST00000638011 SERTM1A2A2V5 107 aa13.35□□□□□ -0.27
UBE3A-227ENST00000638011 NMBP08949 121 aa13.35□□□□□ -0.27
UBE3A-227ENST00000638011 EWSR1Q01844 656 aaKnown RBP eCLIP13.35□□□□□ -0.27
UBE3A-227ENST00000638011 HERPUD1Q15011 391 aa13.35□□□□□ -0.27
UBE3A-227ENST00000638011 NCOA6Q14686 2063 aaPredicted RBP13.35□□□□□ -0.27
UBE3A-227ENST00000638011 PRSS2P07478 247 aa13.35□□□□□ -0.27
UBE3A-227ENST00000638011 PRF1P14222 555 aa13.35□□□□□ -0.27
UBE3A-227ENST00000638011 VAX1Q5SQQ9 334 aa13.35□□□□□ -0.27
UBE3A-227ENST00000638011 QTRT1Q9BXR0 403 aaKnown RBP13.35□□□□□ -0.27
UBE3A-227ENST00000638011 CNTD2Q9H8S5 307 aa13.35□□□□□ -0.27
UBE3A-227ENST00000638011 MYOGP15173 224 aa13.35□□□□□ -0.27
UBE3A-227ENST00000638011 POLR2GP62487 172 aaKnown RBP eCLIP13.35□□□□□ -0.27
UBE3A-227ENST00000638011 SSBP4Q9BWG4 385 aaPredicted RBP13.35□□□□□ -0.27
UBE3A-227ENST00000638011 NPVFQ9HCQ7 196 aa13.35□□□□□ -0.27
UBE3A-227ENST00000638011 ATP23Q9Y6H3 246 aa13.35□□□□□ -0.27
UBE3A-227ENST00000638011 TANC2Q9HCD6 1990 aa13.35□□□□□ -0.27
UBE3A-227ENST00000638011 B4GALT1P15291 398 aa13.35□□□□□ -0.27
UBE3A-227ENST00000638011 TMEM52BQ4KMG9 183 aa13.35□□□□□ -0.27
UBE3A-227ENST00000638011 BAHD1Q8TBE0 780 aaPredicted RBP13.35□□□□□ -0.27
UBE3A-227ENST00000638011 C2orf88Q9BSF0 95 aa13.35□□□□□ -0.27
UBE3A-227ENST00000638011 RBKSQ9H477 322 aa13.35□□□□□ -0.27
UBE3A-227ENST00000638011 TSC2P49815 1807 aa13.35□□□□□ -0.27
UBE3A-227ENST00000638011 CXCL12P48061 93 aa13.35□□□□□ -0.27
UBE3A-227ENST00000638011 AGRNO00468 2067 aa13.35□□□□□ -0.27
UBE3A-227ENST00000638011 FAM90A26D6RGX4 464 aa13.34□□□□□ -0.27
UBE3A-227ENST00000638011 ZNF788Q6ZQV5 615 aa13.34□□□□□ -0.27
UBE3A-227ENST00000638011 ATOH1Q92858 354 aaPredicted RBP13.34□□□□□ -0.27
UBE3A-227ENST00000638011 ZBP1Q9H171 429 aa13.34□□□□□ -0.27
UBE3A-227ENST00000638011 CBLN4Q9NTU7 201 aa13.34□□□□□ -0.27
UBE3A-227ENST00000638011 ATP5LO75964 103 aa13.34□□□□□ -0.27
UBE3A-227ENST00000638011 ISXQ2M1V0 245 aa13.34□□□□□ -0.27
UBE3A-227ENST00000638011 GSN-AS1Q9NRJ2 163 aa13.34□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 31.4 ms