RNA–Protein interactions for RNA: ENST00000637897.1

PNKP-229, Transcript of polynucleotide kinase 3'-phosphatase, humanhuman

TSL 5

Gene PNKP, Length 190 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PNKP-229ENST00000637897 J3QT63 122 aa6.36□□□□□ -1.39
PNKP-229ENST00000637897 M0R1W7 72 aa6.36□□□□□ -1.39
PNKP-229ENST00000637897 CHST1O43916 411 aa6.36□□□□□ -1.39
PNKP-229ENST00000637897 PRAF2O60831 178 aa6.36□□□□□ -1.39
PNKP-229ENST00000637897 TSPAN9O75954 239 aa6.36□□□□□ -1.39
PNKP-229ENST00000637897 H2AFB2P0C5Z0 115 aa6.36□□□□□ -1.39
PNKP-229ENST00000637897 AKAIN1P0CW23 69 aa6.36□□□□□ -1.39
PNKP-229ENST00000637897 VSIG8P0DPA2 414 aa6.36□□□□□ -1.39
PNKP-229ENST00000637897 NDUFB7P17568 137 aa6.36□□□□□ -1.39
PNKP-229ENST00000637897 PRDX2P32119 198 aa6.36□□□□□ -1.39
PNKP-229ENST00000637897 RCVRNP35243 200 aa6.36□□□□□ -1.39
PNKP-229ENST00000637897 HAAOP46952 286 aa6.36□□□□□ -1.39
PNKP-229ENST00000637897 GABRA2P47869 451 aa6.36□□□□□ -1.39
PNKP-229ENST00000637897 UBE2E1P51965 193 aa6.36□□□□□ -1.39
PNKP-229ENST00000637897 TAS2R19P59542 299 aa6.36□□□□□ -1.39
PNKP-229ENST00000637897 RRAS2P62070 204 aaPredicted RBP6.36□□□□□ -1.39
PNKP-229ENST00000637897 CD300CQ08708 224 aa6.36□□□□□ -1.39
PNKP-229ENST00000637897 CNN3Q15417 329 aaKnown RBP6.36□□□□□ -1.39
PNKP-229ENST00000637897 KISS1Q15726 138 aa6.36□□□□□ -1.39
PNKP-229ENST00000637897 LRRC10Q5BKY1 277 aa6.36□□□□□ -1.39
PNKP-229ENST00000637897 CLVS2Q5SYC1 327 aa6.36□□□□□ -1.39
PNKP-229ENST00000637897 UTF1Q5T230 341 aa6.36□□□□□ -1.39
PNKP-229ENST00000637897 PLCXD3Q63HM9 321 aa6.36□□□□□ -1.39
PNKP-229ENST00000637897 GLIPR1L1Q6UWM5 242 aa6.36□□□□□ -1.39
PNKP-229ENST00000637897 LHFPL4Q7Z7J7 247 aa6.36□□□□□ -1.39
PNKP-229ENST00000637897 TMEM229BQ8NBD8 167 aa6.36□□□□□ -1.39
PNKP-229ENST00000637897 H1FXQ92522 213 aaKnown RBP6.36□□□□□ -1.39
PNKP-229ENST00000637897 S100A13Q99584 98 aa6.36□□□□□ -1.39
PNKP-229ENST00000637897 URM1Q9BTM9 101 aaKnown RBP6.36□□□□□ -1.39
PNKP-229ENST00000637897 CST11Q9H112 138 aa6.36□□□□□ -1.39
PNKP-229ENST00000637897 KCNK15Q9H427 330 aa6.36□□□□□ -1.39
PNKP-229ENST00000637897 C16orf95Q9H693 158 aa6.36□□□□□ -1.39
PNKP-229ENST00000637897 MCUBQ9NWR8 336 aa6.36□□□□□ -1.39
PNKP-229ENST00000637897 TGP01266 2768 aa6.36□□□□□ -1.39
PNKP-229ENST00000637897 KIAA2026Q5HYC2 2103 aa6.35□□□□□ -1.39
PNKP-229ENST00000637897 NOTCH3Q9UM47 2321 aa6.35□□□□□ -1.39
PNKP-229ENST00000637897 TRAV6A0A075B6T7 132 aa6.35□□□□□ -1.39
PNKP-229ENST00000637897 IGKV1-12A0A0C4DH73 117 aa6.35□□□□□ -1.39
PNKP-229ENST00000637897 RAB27BO00194 218 aa6.35□□□□□ -1.39
PNKP-229ENST00000637897 PEX14O75381 377 aa6.35□□□□□ -1.39
PNKP-229ENST00000637897 MMP23AO75900 390 aa6.35□□□□□ -1.39
PNKP-229ENST00000637897 TSPAN15O95858 294 aa6.35□□□□□ -1.39
PNKP-229ENST00000637897 CYB5AP00167 134 aa6.35□□□□□ -1.39
PNKP-229ENST00000637897 IGKV1D-12P01611 117 aa6.35□□□□□ -1.39
PNKP-229ENST00000637897 GSTP1P09211 210 aaKnown RBP6.35□□□□□ -1.39
PNKP-229ENST00000637897 GTF2F2P13984 249 aa6.35□□□□□ -1.39
PNKP-229ENST00000637897 PTGFRP43088 359 aa6.35□□□□□ -1.39
PNKP-229ENST00000637897 OR3A4PP47883 348 aa6.35□□□□□ -1.39
PNKP-229ENST00000637897 NPBWR2P48146 333 aa6.35□□□□□ -1.39
PNKP-229ENST00000637897 CCR6P51684 374 aa6.35□□□□□ -1.39
PNKP-229ENST00000637897 UNC119Q13432 240 aa6.35□□□□□ -1.39
PNKP-229ENST00000637897 ARL6IP1Q15041 203 aa6.35□□□□□ -1.39
PNKP-229ENST00000637897 ATAD3CQ5T2N8 411 aa6.35□□□□□ -1.39
PNKP-229ENST00000637897 SLC35E4Q6ICL7 350 aa6.35□□□□□ -1.39
PNKP-229ENST00000637897 C17orf107Q6ZR85 190 aa6.35□□□□□ -1.39
PNKP-229ENST00000637897 Q6ZS46 218 aa6.35□□□□□ -1.39
PNKP-229ENST00000637897 TCTE3Q8IZS6 198 aa6.35□□□□□ -1.39
PNKP-229ENST00000637897 FTMTQ8N4E7 242 aa6.35□□□□□ -1.39
PNKP-229ENST00000637897 BEND2Q8NDZ0 799 aa6.35□□□□□ -1.39
PNKP-229ENST00000637897 TMEM185AQ8NFB2 350 aa6.35□□□□□ -1.39
PNKP-229ENST00000637897 OR56B1Q8NGI3 324 aa6.35□□□□□ -1.39
PNKP-229ENST00000637897 OR10R2Q8NGX6 335 aa6.35□□□□□ -1.39
PNKP-229ENST00000637897 OR4F5Q8NH21 305 aa6.35□□□□□ -1.39
PNKP-229ENST00000637897 NPRL2Q8WTW4 380 aa6.35□□□□□ -1.39
PNKP-229ENST00000637897 MED30Q96HR3 178 aa6.35□□□□□ -1.39
PNKP-229ENST00000637897 ST6GAL2Q96JF0 529 aa6.35□□□□□ -1.39
PNKP-229ENST00000637897 NKX3-1Q99801 234 aaPredicted RBP6.35□□□□□ -1.39
PNKP-229ENST00000637897 TMEM59Q9BXS4 323 aa6.35□□□□□ -1.39
PNKP-229ENST00000637897 C20orf85Q9H1P6 137 aa6.35□□□□□ -1.39
PNKP-229ENST00000637897 MEGF9Q9H1U4 602 aa6.35□□□□□ -1.39
PNKP-229ENST00000637897 MED28Q9H204 178 aa6.35□□□□□ -1.39
PNKP-229ENST00000637897 METTL8Q9H825 291 aaKnown RBP6.35□□□□□ -1.39
PNKP-229ENST00000637897 ING3Q9NXR8 418 aa6.35□□□□□ -1.39
PNKP-229ENST00000637897 RASL12Q9NYN1 266 aa6.35□□□□□ -1.39
PNKP-229ENST00000637897 VPREB3Q9UKI3 123 aa6.35□□□□□ -1.39
PNKP-229ENST00000637897 BOLA1Q9Y3E2 137 aa6.35□□□□□ -1.39
PNKP-229ENST00000637897 RNF114Q9Y508 228 aa6.35□□□□□ -1.39
PNKP-229ENST00000637897 TRBV23-1A0A0A0MS06 115 aa6.34□□□□□ -1.39
PNKP-229ENST00000637897 NKX6-3A6NJ46 265 aa6.34□□□□□ -1.39
PNKP-229ENST00000637897 C17orf98A8MV24 154 aa6.34□□□□□ -1.39
PNKP-229ENST00000637897 ODF3BA8MYP8 253 aa6.34□□□□□ -1.39
PNKP-229ENST00000637897 K7N7A8 449 aa6.34□□□□□ -1.39
PNKP-229ENST00000637897 PSPNO60542 156 aa6.34□□□□□ -1.39
PNKP-229ENST00000637897 CRTAPO75718 401 aaPredicted RBP6.34□□□□□ -1.39
PNKP-229ENST00000637897 NDUFB6O95139 128 aa6.34□□□□□ -1.39
PNKP-229ENST00000637897 MPIG6BO95866 241 aa6.34□□□□□ -1.39
PNKP-229ENST00000637897 KNG1P01042 644 aa6.34□□□□□ -1.39
PNKP-229ENST00000637897 TK1P04183 234 aa6.34□□□□□ -1.39
PNKP-229ENST00000637897 PTHLHP12272 177 aa6.34□□□□□ -1.39
PNKP-229ENST00000637897 TBPP20226 339 aa6.34□□□□□ -1.39
PNKP-229ENST00000637897 CBX5P45973 191 aa6.34□□□□□ -1.39
PNKP-229ENST00000637897 VEGFCP49767 419 aa6.34□□□□□ -1.39
PNKP-229ENST00000637897 MECP2P51608 486 aaKnown RBP6.34□□□□□ -1.39
PNKP-229ENST00000637897 MTCP1P56278 107 aa6.34□□□□□ -1.39
PNKP-229ENST00000637897 GUCA2AQ02747 115 aa6.34□□□□□ -1.39
PNKP-229ENST00000637897 COL10A1Q03692 680 aa6.34□□□□□ -1.39
PNKP-229ENST00000637897 IL24Q13007 206 aa6.34□□□□□ -1.39
PNKP-229ENST00000637897 MEF2DQ14814 521 aa6.34□□□□□ -1.39
PNKP-229ENST00000637897 RBMS2Q15434 407 aaKnown RBP6.34□□□□□ -1.39
PNKP-229ENST00000637897 PNLIPRP3Q17RR3 467 aa6.34□□□□□ -1.39
Retrieved 100 of 20,778 RNA–protein pairs in 31.6 ms