RNA–Protein interactions for RNA: ENST00000635675.2

LINC00339-210, long intergenic non-protein coding RNA 339, humanhuman

TSL 5 BASIC

Gene LINC00339, Length 1,404 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00339-210ENST00000635675 RNASE1P07998 156 aaKnown RBP7.89□□□□□ -1.15
LINC00339-210ENST00000635675 SNRPBP14678 240 aaKnown RBP7.89□□□□□ -1.15
LINC00339-210ENST00000635675 RCC1P18754 421 aaPredicted RBP7.89□□□□□ -1.15
LINC00339-210ENST00000635675 RAB6AP20340 208 aa7.89□□□□□ -1.15
LINC00339-210ENST00000635675 VEGFCP49767 419 aa7.89□□□□□ -1.15
LINC00339-210ENST00000635675 LGALS4P56470 323 aa7.89□□□□□ -1.15
LINC00339-210ENST00000635675 DYNC1I2Q13409 638 aaKnown RBP7.89□□□□□ -1.15
LINC00339-210ENST00000635675 PLAC9Q5JTB6 97 aa7.89□□□□□ -1.15
LINC00339-210ENST00000635675 SFXN4Q6P4A7 337 aa7.89□□□□□ -1.15
LINC00339-210ENST00000635675 RTN4RL2Q86UN3 420 aa7.89□□□□□ -1.15
LINC00339-210ENST00000635675 DYNAPQ8N1N2 210 aa7.89□□□□□ -1.15
LINC00339-210ENST00000635675 TMEM86BQ8N661 226 aa7.89□□□□□ -1.15
LINC00339-210ENST00000635675 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP7.89□□□□□ -1.15
LINC00339-210ENST00000635675 DTX3Q8N9I9 347 aa7.89□□□□□ -1.15
LINC00339-210ENST00000635675 OR56B1Q8NGI3 324 aa7.89□□□□□ -1.15
LINC00339-210ENST00000635675 OR4K15Q8NH41 348 aa7.89□□□□□ -1.15
LINC00339-210ENST00000635675 MRPL30Q8TCC3 161 aaKnown RBP7.89□□□□□ -1.15
LINC00339-210ENST00000635675 PTX4Q96A99 478 aa7.89□□□□□ -1.15
LINC00339-210ENST00000635675 MALSU1Q96EH3 234 aa7.89□□□□□ -1.15
LINC00339-210ENST00000635675 C19orf24Q9BVV8 132 aa7.89□□□□□ -1.15
LINC00339-210ENST00000635675 ZNF286AQ9HBT8 521 aa7.89□□□□□ -1.15
LINC00339-210ENST00000635675 MBNL3Q9NUK0 354 aaKnown RBP7.89□□□□□ -1.15
LINC00339-210ENST00000635675 PLEKHJ1Q9NW61 149 aa7.89□□□□□ -1.15
LINC00339-210ENST00000635675 IDI2-AS1Q9NZ38 188 aa7.89□□□□□ -1.15
LINC00339-210ENST00000635675 COMMD3Q9UBI1 195 aa7.89□□□□□ -1.15
LINC00339-210ENST00000635675 TRAPPC2LQ9UL33 140 aa7.89□□□□□ -1.15
LINC00339-210ENST00000635675 TBL2Q9Y4P3 447 aaKnown RBP7.89□□□□□ -1.15
LINC00339-210ENST00000635675 POMT1Q9Y6A1 747 aa7.89□□□□□ -1.15
LINC00339-210ENST00000635675 C12orf77C9JDV5 145 aa7.88□□□□□ -1.15
LINC00339-210ENST00000635675 RAB27BO00194 218 aa7.88□□□□□ -1.15
LINC00339-210ENST00000635675 F2RL2O00254 374 aa7.88□□□□□ -1.15
LINC00339-210ENST00000635675 CTDSP2O14595 271 aa7.88□□□□□ -1.15
LINC00339-210ENST00000635675 NAPSAO96009 420 aa7.88□□□□□ -1.15
LINC00339-210ENST00000635675 NFYBP25208 207 aa7.88□□□□□ -1.15
LINC00339-210ENST00000635675 PAX6P26367 422 aa7.88□□□□□ -1.15
LINC00339-210ENST00000635675 LOXL3P58215 753 aa7.88□□□□□ -1.15
LINC00339-210ENST00000635675 FAM189A2Q15884 450 aa7.88□□□□□ -1.15
LINC00339-210ENST00000635675 AANATQ16613 207 aa7.88□□□□□ -1.15
LINC00339-210ENST00000635675 MINOS1Q5TGZ0 78 aa7.88□□□□□ -1.15
LINC00339-210ENST00000635675 C16orf87Q6PH81 154 aa7.88□□□□□ -1.15
LINC00339-210ENST00000635675 Q6ZTK2 550 aa7.88□□□□□ -1.15
LINC00339-210ENST00000635675 OR52M1Q8NGK5 317 aa7.88□□□□□ -1.15
LINC00339-210ENST00000635675 OR4P4Q8NGL7 312 aa7.88□□□□□ -1.15
LINC00339-210ENST00000635675 ZNF596Q8TC21 504 aa7.88□□□□□ -1.15
LINC00339-210ENST00000635675 ARL11Q969Q4 196 aa7.88□□□□□ -1.15
LINC00339-210ENST00000635675 ARHGAP5-AS1Q96IT6 56 aa7.88□□□□□ -1.15
LINC00339-210ENST00000635675 PECRQ9BY49 303 aa7.88□□□□□ -1.15
LINC00339-210ENST00000635675 CHIAQ9BZP6 476 aa7.88□□□□□ -1.15
LINC00339-210ENST00000635675 DPAGT1Q9H3H5 408 aa7.88□□□□□ -1.15
LINC00339-210ENST00000635675 KCNK7Q9Y2U2 307 aa7.88□□□□□ -1.15
LINC00339-210ENST00000635675 MINOS1-NBL1R4GNA1 71 aa7.88□□□□□ -1.15
LINC00339-210ENST00000635675 FAM172BPA6NC97 362 aa7.87□□□□□ -1.15
LINC00339-210ENST00000635675 METTL21EPA6NDL7 271 aa7.87□□□□□ -1.15
LINC00339-210ENST00000635675 VGLL3A8MV65 326 aa7.87□□□□□ -1.15
LINC00339-210ENST00000635675 FAM25AB3EWG3 89 aa7.87□□□□□ -1.15
LINC00339-210ENST00000635675 FAM25CB3EWG5 89 aa7.87□□□□□ -1.15
LINC00339-210ENST00000635675 FAM25GB3EWG6 89 aa7.87□□□□□ -1.15
LINC00339-210ENST00000635675 HPGDSO60760 199 aa7.87□□□□□ -1.15
LINC00339-210ENST00000635675 HBZP02008 142 aa7.87□□□□□ -1.15
LINC00339-210ENST00000635675 HTR1DP28221 377 aa7.87□□□□□ -1.15
LINC00339-210ENST00000635675 S100A5P33763 92 aa7.87□□□□□ -1.15
LINC00339-210ENST00000635675 PRRX1P54821 245 aa7.87□□□□□ -1.15
LINC00339-210ENST00000635675 SSX2Q16385 188 aa7.87□□□□□ -1.15
LINC00339-210ENST00000635675 MOGAT2Q3SYC2 334 aa7.87□□□□□ -1.15
LINC00339-210ENST00000635675 C6orf183Q5T699 404 aa7.87□□□□□ -1.15
LINC00339-210ENST00000635675 ZNF880Q6PDB4 577 aa7.87□□□□□ -1.15
LINC00339-210ENST00000635675 TRAT1Q6PIZ9 186 aa7.87□□□□□ -1.15
LINC00339-210ENST00000635675 Q6ZPA2 131 aa7.87□□□□□ -1.15
LINC00339-210ENST00000635675 ZNF554Q86TJ5 538 aa7.87□□□□□ -1.15
LINC00339-210ENST00000635675 LAX1Q8IWV1 398 aa7.87□□□□□ -1.15
LINC00339-210ENST00000635675 OR6Q1Q8NGQ2 317 aa7.87□□□□□ -1.15
LINC00339-210ENST00000635675 OR5H6Q8NGV6 325 aa7.87□□□□□ -1.15
LINC00339-210ENST00000635675 OR10R2Q8NGX6 335 aa7.87□□□□□ -1.15
LINC00339-210ENST00000635675 OR9G1Q8NH87 305 aa7.87□□□□□ -1.15
LINC00339-210ENST00000635675 UBALD1Q8TB05 177 aa7.87□□□□□ -1.15
LINC00339-210ENST00000635675 PIFOQ8TCI5 191 aa7.87□□□□□ -1.15
LINC00339-210ENST00000635675 SSX3Q99909 188 aa7.87□□□□□ -1.15
LINC00339-210ENST00000635675 RIMS4Q9H426 269 aaPredicted RBP7.87□□□□□ -1.15
LINC00339-210ENST00000635675 TAF9BQ9HBM6 251 aa7.87□□□□□ -1.15
LINC00339-210ENST00000635675 TNFRSF19Q9NS68 423 aa7.87□□□□□ -1.15
LINC00339-210ENST00000635675 DPM3Q9P2X0 92 aa7.87□□□□□ -1.15
LINC00339-210ENST00000635675 AK3Q9UIJ7 227 aa7.87□□□□□ -1.15
LINC00339-210ENST00000635675 PSG11Q9UQ72 335 aa7.87□□□□□ -1.15
LINC00339-210ENST00000635675 TRBV6-6A0A0A6YYG2 114 aa7.86□□□□□ -1.15
LINC00339-210ENST00000635675 FAM181BA6NEQ2 426 aa7.86□□□□□ -1.15
LINC00339-210ENST00000635675 POM121CA8CG34 1229 aa7.86□□□□□ -1.15
LINC00339-210ENST00000635675 LY6LH3BQJ8 138 aa7.86□□□□□ -1.15
LINC00339-210ENST00000635675 BUB1B-PAK6H3BSN5 160 aa7.86□□□□□ -1.15
LINC00339-210ENST00000635675 J3QR06 171 aa7.86□□□□□ -1.15
LINC00339-210ENST00000635675 J3QRK9 145 aa7.86□□□□□ -1.15
LINC00339-210ENST00000635675 SDCBPO00560 298 aaPredicted RBP7.86□□□□□ -1.15
LINC00339-210ENST00000635675 TOR1AO14656 332 aa7.86□□□□□ -1.15
LINC00339-210ENST00000635675 SPINT2O43291 252 aa7.86□□□□□ -1.15
LINC00339-210ENST00000635675 TMEM127O75204 238 aa7.86□□□□□ -1.15
LINC00339-210ENST00000635675 IGHV3-7P01780 117 aa7.86□□□□□ -1.15
LINC00339-210ENST00000635675 SCAND1P57086 179 aa7.86□□□□□ -1.15
LINC00339-210ENST00000635675 LTC4SQ16873 150 aa7.86□□□□□ -1.15
LINC00339-210ENST00000635675 LRRC75BQ2VPJ9 315 aa7.86□□□□□ -1.15
LINC00339-210ENST00000635675 HLA-DRB5Q30154 266 aa7.86□□□□□ -1.15
LINC00339-210ENST00000635675 OLFML2AQ68BL7 652 aa7.86□□□□□ -1.15
Retrieved 100 of 20,778 RNA–protein pairs in 40.1 ms