RNA–Protein interactions for RNA: ENST00000634926.1

SMARCB1-208, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily b, member 1, humanhuman

TSL 1 (best)

Gene SMARCB1, Length 269 nt, Biotype protein coding, Subcellular localisation Cytosol, Exosome, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCB1-208ENST00000634926 SNAPINO95295 136 aa1.78□□□□□ -2.12
SMARCB1-208ENST00000634926 IGF2P01344 180 aa1.78□□□□□ -2.12
SMARCB1-208ENST00000634926 IGHMP01871 453 aa1.78□□□□□ -2.12
SMARCB1-208ENST00000634926 SERPINA5P05154 406 aa1.78□□□□□ -2.12
SMARCB1-208ENST00000634926 DBIP07108 87 aaKnown RBP1.78□□□□□ -2.12
SMARCB1-208ENST00000634926 BPGMP07738 259 aa1.78□□□□□ -2.12
SMARCB1-208ENST00000634926 ADRA2AP08913 450 aa1.78□□□□□ -2.12
SMARCB1-208ENST00000634926 GIG44P09565 113 aaPredicted RBP1.78□□□□□ -2.12
SMARCB1-208ENST00000634926 ASAH2BP0C7U1 165 aa1.78□□□□□ -2.12
SMARCB1-208ENST00000634926 P0C879 139 aa1.78□□□□□ -2.12
SMARCB1-208ENST00000634926 GKN3PP0CG01 181 aa1.78□□□□□ -2.12
SMARCB1-208ENST00000634926 ANXA8P13928 327 aa1.78□□□□□ -2.12
SMARCB1-208ENST00000634926 ZNF43P17038 809 aa1.78□□□□□ -2.12
SMARCB1-208ENST00000634926 PRTN3P24158 256 aa1.78□□□□□ -2.12
SMARCB1-208ENST00000634926 COL8A2P25067 703 aa1.78□□□□□ -2.12
SMARCB1-208ENST00000634926 CASQ1P31415 396 aa1.78□□□□□ -2.12
SMARCB1-208ENST00000634926 IFNA8P32881 189 aa1.78□□□□□ -2.12
SMARCB1-208ENST00000634926 GPR6P46095 362 aaPredicted RBP1.78□□□□□ -2.12
SMARCB1-208ENST00000634926 GPM6AP51674 278 aa1.78□□□□□ -2.12
SMARCB1-208ENST00000634926 RGS8P57771 180 aaPredicted RBP1.78□□□□□ -2.12
SMARCB1-208ENST00000634926 OR2B6P58173 313 aa1.78□□□□□ -2.12
SMARCB1-208ENST00000634926 ERVS71-1P61550 626 aa1.78□□□□□ -2.12
SMARCB1-208ENST00000634926 ACTG1P63261 375 aa1.78□□□□□ -2.12
SMARCB1-208ENST00000634926 MAD2L1BPQ15013 274 aaPredicted RBP1.78□□□□□ -2.12
SMARCB1-208ENST00000634926 SLC9A3R2Q15599 337 aa1.78□□□□□ -2.12
SMARCB1-208ENST00000634926 SPRNQ5BIV9 151 aa1.78□□□□□ -2.12
SMARCB1-208ENST00000634926 C10orf128Q5T292 105 aa1.78□□□□□ -2.12
SMARCB1-208ENST00000634926 ANXA8L1Q5VT79 327 aa1.78□□□□□ -2.12
SMARCB1-208ENST00000634926 KRTAP5-7Q6L8G8 165 aa1.78□□□□□ -2.12
SMARCB1-208ENST00000634926 DHRS4L2Q6PKH6 230 aa1.78□□□□□ -2.12
SMARCB1-208ENST00000634926 C5orf46Q6UWT4 87 aa1.78□□□□□ -2.12
SMARCB1-208ENST00000634926 Q6ZR03 302 aa1.78□□□□□ -2.12
SMARCB1-208ENST00000634926 ZNF101Q8IZC7 436 aa1.78□□□□□ -2.12
SMARCB1-208ENST00000634926 ZNF283Q8N7M2 679 aa1.78□□□□□ -2.12
SMARCB1-208ENST00000634926 C3orf56Q8N813 242 aa1.78□□□□□ -2.12
SMARCB1-208ENST00000634926 OR4M2Q8NGB6 313 aa1.78□□□□□ -2.12
SMARCB1-208ENST00000634926 OR4A15Q8NGL6 344 aa1.78□□□□□ -2.12
SMARCB1-208ENST00000634926 FAM81AQ8TBF8 368 aa1.78□□□□□ -2.12
SMARCB1-208ENST00000634926 MRAPQ8TCY5 172 aa1.78□□□□□ -2.12
SMARCB1-208ENST00000634926 AGR3Q8TD06 166 aa1.78□□□□□ -2.12
SMARCB1-208ENST00000634926 TCP10LQ8TDR4 215 aa1.78□□□□□ -2.12
SMARCB1-208ENST00000634926 ZNF418Q8TF45 676 aaPredicted RBP1.78□□□□□ -2.12
SMARCB1-208ENST00000634926 RDH5Q92781 318 aa1.78□□□□□ -2.12
SMARCB1-208ENST00000634926 STMN2Q93045 179 aa1.78□□□□□ -2.12
SMARCB1-208ENST00000634926 POP5Q969H6 163 aaKnown RBP1.78□□□□□ -2.12
SMARCB1-208ENST00000634926 TMEM54Q969K7 222 aa1.78□□□□□ -2.12
SMARCB1-208ENST00000634926 PKNOX2Q96KN3 472 aa1.78□□□□□ -2.12
SMARCB1-208ENST00000634926 RHOXF2Q9BQY4 288 aa1.78□□□□□ -2.12
SMARCB1-208ENST00000634926 TMEM109Q9BVC6 243 aa1.78□□□□□ -2.12
SMARCB1-208ENST00000634926 SUCNR1Q9BXA5 334 aa1.78□□□□□ -2.12
SMARCB1-208ENST00000634926 C20orf85Q9H1P6 137 aa1.78□□□□□ -2.12
SMARCB1-208ENST00000634926 EXD2Q9NVH0 621 aa1.78□□□□□ -2.12
SMARCB1-208ENST00000634926 TMEM38BQ9NVV0 291 aa1.78□□□□□ -2.12
SMARCB1-208ENST00000634926 VNN3Q9NY84 501 aa1.78□□□□□ -2.12
SMARCB1-208ENST00000634926 TREM2Q9NZC2 230 aa1.78□□□□□ -2.12
SMARCB1-208ENST00000634926 MARCOQ9UEW3 520 aaPredicted RBP1.78□□□□□ -2.12
SMARCB1-208ENST00000634926 ZNF107Q9UII5 783 aaPredicted RBP1.78□□□□□ -2.12
SMARCB1-208ENST00000634926 KIF25Q9UIL4 384 aa1.78□□□□□ -2.12
SMARCB1-208ENST00000634926 NUP50Q9UKX7 468 aa1.78□□□□□ -2.12
SMARCB1-208ENST00000634926 FIS1Q9Y3D6 152 aa1.78□□□□□ -2.12
SMARCB1-208ENST00000634926 UGT2A1Q9Y4X1 527 aa1.78□□□□□ -2.12
SMARCB1-208ENST00000634926 CACNG2Q9Y698 323 aa1.78□□□□□ -2.12
SMARCB1-208ENST00000634926 V9GY05 133 aa1.78□□□□□ -2.12
SMARCB1-208ENST00000634926 PKHD1P08F94 4074 aa1.78□□□□□ -2.12
SMARCB1-208ENST00000634926 IGHV3OR16-13A0A075B7E8 117 aa1.77□□□□□ -2.13
SMARCB1-208ENST00000634926 IGKV1D-43A0A0B4J1Z2 117 aa1.77□□□□□ -2.13
SMARCB1-208ENST00000634926 FAM168BA1KXE4 195 aa1.77□□□□□ -2.13
SMARCB1-208ENST00000634926 SMCO3A2RU48 225 aa1.77□□□□□ -2.13
SMARCB1-208ENST00000634926 CENPBD1B2RD01 187 aa1.77□□□□□ -2.13
SMARCB1-208ENST00000634926 LRRN3E7EW58 273 aa1.77□□□□□ -2.13
SMARCB1-208ENST00000634926 TRAPPC2LH3BP13 241 aa1.77□□□□□ -2.13
SMARCB1-208ENST00000634926 WRBO00258 174 aa1.77□□□□□ -2.13
SMARCB1-208ENST00000634926 PLPP3O14495 311 aa1.77□□□□□ -2.13
SMARCB1-208ENST00000634926 AIM2O14862 343 aa1.77□□□□□ -2.13
SMARCB1-208ENST00000634926 CASQ2O14958 399 aaPredicted RBP1.77□□□□□ -2.13
SMARCB1-208ENST00000634926 BIRC5O15392 142 aa1.77□□□□□ -2.13
SMARCB1-208ENST00000634926 CHP2O43745 196 aa1.77□□□□□ -2.13
SMARCB1-208ENST00000634926 OR2T1O43869 369 aa1.77□□□□□ -2.13
SMARCB1-208ENST00000634926 TPST1O60507 370 aa1.77□□□□□ -2.13
SMARCB1-208ENST00000634926 OR2F2O95006 317 aa1.77□□□□□ -2.13
SMARCB1-208ENST00000634926 UBL3O95164 117 aa1.77□□□□□ -2.13
SMARCB1-208ENST00000634926 MPZL1O95297 269 aa1.77□□□□□ -2.13
SMARCB1-208ENST00000634926 AHSA1O95433 338 aa1.77□□□□□ -2.13
SMARCB1-208ENST00000634926 IGHV1-46P01743 117 aa1.77□□□□□ -2.13
SMARCB1-208ENST00000634926 SERPINE1P05121 402 aa1.77□□□□□ -2.13
SMARCB1-208ENST00000634926 BCHEP06276 602 aa1.77□□□□□ -2.13
SMARCB1-208ENST00000634926 ERCC1P07992 297 aaPredicted RBP1.77□□□□□ -2.13
SMARCB1-208ENST00000634926 MDKP21741 143 aaPredicted RBP1.77□□□□□ -2.13
SMARCB1-208ENST00000634926 GRPRP30550 384 aa1.77□□□□□ -2.13
SMARCB1-208ENST00000634926 SRP14P37108 136 aaKnown RBP1.77□□□□□ -2.13
SMARCB1-208ENST00000634926 RBMXP38159 391 aaKnown RBP1.77□□□□□ -2.13
SMARCB1-208ENST00000634926 MPV17P39210 176 aa1.77□□□□□ -2.13
SMARCB1-208ENST00000634926 RPS5P46782 204 aaKnown RBP1.77□□□□□ -2.13
SMARCB1-208ENST00000634926 TFPI2P48307 235 aa1.77□□□□□ -2.13
SMARCB1-208ENST00000634926 GSSP48637 474 aa1.77□□□□□ -2.13
SMARCB1-208ENST00000634926 GZMMP51124 257 aa1.77□□□□□ -2.13
SMARCB1-208ENST00000634926 CRISP3P54108 245 aa1.77□□□□□ -2.13
SMARCB1-208ENST00000634926 KLF3P57682 345 aaPredicted RBP1.77□□□□□ -2.13
SMARCB1-208ENST00000634926 DSTNP60981 165 aa1.77□□□□□ -2.13
SMARCB1-208ENST00000634926 UBE2NP61088 152 aaKnown RBP1.77□□□□□ -2.13
Retrieved 100 of 20,778 RNA–protein pairs in 51.7 ms