RNA–Protein interactions for RNA: ENST00000634712.2

LINC00339-207, long intergenic non-protein coding RNA 339, humanhuman

TSL 5

Gene LINC00339, Length 1,388 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00339-207ENST00000634712 SSX1Q16384 188 aa12.62□□□□□ -0.39
LINC00339-207ENST00000634712 UTF1Q5T230 341 aa12.62□□□□□ -0.39
LINC00339-207ENST00000634712 SIGIRRQ6IA17 410 aa12.62□□□□□ -0.39
LINC00339-207ENST00000634712 SPARTQ8N0X7 666 aa12.62□□□□□ -0.39
LINC00339-207ENST00000634712 FCGR1BQ92637 280 aa12.62□□□□□ -0.39
LINC00339-207ENST00000634712 CITED1Q99966 193 aa12.62□□□□□ -0.39
LINC00339-207ENST00000634712 PRSS22Q9GZN4 317 aa12.62□□□□□ -0.39
LINC00339-207ENST00000634712 NDUFB11Q9NX14 153 aa12.62□□□□□ -0.39
LINC00339-207ENST00000634712 SIGLEC9Q9Y336 463 aa12.62□□□□□ -0.39
LINC00339-207ENST00000634712 V9GY05 133 aa12.62□□□□□ -0.39
LINC00339-207ENST00000634712 TMEM14DPA8MWL7 114 aa12.61□□□□□ -0.39
LINC00339-207ENST00000634712 LY6LH3BQJ8 138 aa12.61□□□□□ -0.39
LINC00339-207ENST00000634712 CCRL2O00421 344 aa12.61□□□□□ -0.39
LINC00339-207ENST00000634712 TIMM23O14925 209 aa12.61□□□□□ -0.39
LINC00339-207ENST00000634712 PEX14O75381 377 aa12.61□□□□□ -0.39
LINC00339-207ENST00000634712 CD24P25063 80 aa12.61□□□□□ -0.39
LINC00339-207ENST00000634712 BLVRBP30043 206 aaPredicted RBP12.61□□□□□ -0.39
LINC00339-207ENST00000634712 C16orf82Q7Z2V1 217 aa12.61□□□□□ -0.39
LINC00339-207ENST00000634712 OR2W3Q7Z3T1 314 aa12.61□□□□□ -0.39
LINC00339-207ENST00000634712 TM2D1Q9BX74 207 aa12.61□□□□□ -0.39
LINC00339-207ENST00000634712 KCNK15Q9H427 330 aa12.61□□□□□ -0.39
LINC00339-207ENST00000634712 PLEKHJ1Q9NW61 149 aa12.61□□□□□ -0.39
LINC00339-207ENST00000634712 GFOD1Q9NXC2 390 aa12.61□□□□□ -0.39
LINC00339-207ENST00000634712 GNG12Q9UBI6 72 aa12.61□□□□□ -0.39
LINC00339-207ENST00000634712 IGHV3-43A0A0B4J1X8 118 aa12.6□□□□□ -0.39
LINC00339-207ENST00000634712 TRDV1A0A1B0GX56 115 aa12.6□□□□□ -0.39
LINC00339-207ENST00000634712 A0A1W2PPE3 182 aa12.6□□□□□ -0.39
LINC00339-207ENST00000634712 C12orf77C9JDV5 145 aa12.6□□□□□ -0.39
LINC00339-207ENST00000634712 FAM106CPP0CH98 169 aa12.6□□□□□ -0.39
LINC00339-207ENST00000634712 IGHV3-43DP0DP04 118 aa12.6□□□□□ -0.39
LINC00339-207ENST00000634712 RCC1P18754 421 aaPredicted RBP12.6□□□□□ -0.39
LINC00339-207ENST00000634712 IL3RAP26951 378 aa12.6□□□□□ -0.39
LINC00339-207ENST00000634712 CHATP28329 748 aa12.6□□□□□ -0.39
LINC00339-207ENST00000634712 RAB7AP51149 207 aa12.6□□□□□ -0.39
LINC00339-207ENST00000634712 UNC119Q13432 240 aa12.6□□□□□ -0.39
LINC00339-207ENST00000634712 TMEM30BQ3MIR4 351 aa12.6□□□□□ -0.39
LINC00339-207ENST00000634712 PRR31Q5SQ13 230 aa12.6□□□□□ -0.39
LINC00339-207ENST00000634712 UBE2UQ5VVX9 321 aa12.6□□□□□ -0.39
LINC00339-207ENST00000634712 Q6ZTK2 550 aa12.6□□□□□ -0.39
LINC00339-207ENST00000634712 GAPTQ8N292 157 aa12.6□□□□□ -0.39
LINC00339-207ENST00000634712 OR51D1Q8NGF3 324 aa12.6□□□□□ -0.39
LINC00339-207ENST00000634712 GFI1Q99684 422 aa12.6□□□□□ -0.39
LINC00339-207ENST00000634712 NICN1Q9BSH3 213 aa12.6□□□□□ -0.39
LINC00339-207ENST00000634712 FAAP24Q9BTP7 215 aa12.6□□□□□ -0.39
LINC00339-207ENST00000634712 CHMP1AQ9HD42 196 aaPredicted RBP12.6□□□□□ -0.39
LINC00339-207ENST00000634712 TRAV1-2A0A0B4J238 106 aa12.59□□□□□ -0.39
LINC00339-207ENST00000634712 M0QZ24 198 aa12.59□□□□□ -0.39
LINC00339-207ENST00000634712 HBZP02008 142 aa12.59□□□□□ -0.39
LINC00339-207ENST00000634712 VSIG10L2P0DP72 767 aa12.59□□□□□ -0.39
LINC00339-207ENST00000634712 GALP22466 123 aa12.59□□□□□ -0.39
LINC00339-207ENST00000634712 EFNB2P52799 333 aa12.59□□□□□ -0.39
LINC00339-207ENST00000634712 CLDN12P56749 244 aa12.59□□□□□ -0.39
LINC00339-207ENST00000634712 KRTAP10-3P60369 221 aa12.59□□□□□ -0.39
LINC00339-207ENST00000634712 QRFPP83859 136 aa12.59□□□□□ -0.39
LINC00339-207ENST00000634712 HES5Q5TA89 166 aa12.59□□□□□ -0.39
LINC00339-207ENST00000634712 C6orf201Q7Z4U5 140 aa12.59□□□□□ -0.39
LINC00339-207ENST00000634712 FAM3DQ96BQ1 224 aa12.59□□□□□ -0.39
LINC00339-207ENST00000634712 SULT4A1Q9BR01 284 aa12.59□□□□□ -0.39
LINC00339-207ENST00000634712 LIN7BQ9HAP6 207 aa12.59□□□□□ -0.39
LINC00339-207ENST00000634712 TAF9BQ9HBM6 251 aa12.59□□□□□ -0.39
LINC00339-207ENST00000634712 STEAP1Q9UHE8 339 aa12.59□□□□□ -0.39
LINC00339-207ENST00000634712 GAPDHP04406 335 aaKnown RBP12.58□□□□□ -0.4
LINC00339-207ENST00000634712 LPLP06858 475 aa12.58□□□□□ -0.4
LINC00339-207ENST00000634712 LOXL3P58215 753 aa12.58□□□□□ -0.4
LINC00339-207ENST00000634712 HES1Q14469 280 aa12.58□□□□□ -0.4
LINC00339-207ENST00000634712 C2orf76Q3KRA6 126 aa12.58□□□□□ -0.4
LINC00339-207ENST00000634712 Q3ZCU0 254 aa12.58□□□□□ -0.4
LINC00339-207ENST00000634712 C22orf42Q6IC83 251 aa12.58□□□□□ -0.4
LINC00339-207ENST00000634712 ZNF773Q6PK81 442 aa12.58□□□□□ -0.4
LINC00339-207ENST00000634712 CD200R1LQ6Q8B3 271 aa12.58□□□□□ -0.4
LINC00339-207ENST00000634712 ZNF554Q86TJ5 538 aa12.58□□□□□ -0.4
LINC00339-207ENST00000634712 OR8H3Q8N146 312 aa12.58□□□□□ -0.4
LINC00339-207ENST00000634712 C8orf31Q8N9H6 132 aa12.58□□□□□ -0.4
LINC00339-207ENST00000634712 OR10V1Q8NGI7 309 aa12.58□□□□□ -0.4
LINC00339-207ENST00000634712 OR1L1Q8NH94 360 aa12.58□□□□□ -0.4
LINC00339-207ENST00000634712 MRPL30Q8TCC3 161 aaKnown RBP12.58□□□□□ -0.4
LINC00339-207ENST00000634712 OCSTAMPQ9BR26 566 aa12.58□□□□□ -0.4
LINC00339-207ENST00000634712 SLC25A33Q9BSK2 321 aa12.58□□□□□ -0.4
LINC00339-207ENST00000634712 LPAR5Q9H1C0 372 aa12.58□□□□□ -0.4
LINC00339-207ENST00000634712 ZNF702PQ9H963 129 aa12.58□□□□□ -0.4
LINC00339-207ENST00000634712 OR2S2Q9NQN1 319 aa12.58□□□□□ -0.4
LINC00339-207ENST00000634712 MBNL3Q9NUK0 354 aaKnown RBP12.58□□□□□ -0.4
LINC00339-207ENST00000634712 ABRACLQ9P1F3 81 aa12.58□□□□□ -0.4
LINC00339-207ENST00000634712 OR2F2O95006 317 aa12.57□□□□□ -0.4
LINC00339-207ENST00000634712 RAB3BP20337 219 aa12.57□□□□□ -0.4
LINC00339-207ENST00000634712 BLCAPP62952 87 aa12.57□□□□□ -0.4
LINC00339-207ENST00000634712 HABP2Q14520 560 aaPredicted RBP12.57□□□□□ -0.4
LINC00339-207ENST00000634712 HERPUD1Q15011 391 aa12.57□□□□□ -0.4
LINC00339-207ENST00000634712 MOB3BQ86TA1 216 aa12.57□□□□□ -0.4
LINC00339-207ENST00000634712 THNSL2Q86YJ6 484 aa12.57□□□□□ -0.4
LINC00339-207ENST00000634712 LINC00311Q8N616 119 aa12.57□□□□□ -0.4
LINC00339-207ENST00000634712 DRAM1Q8N682 238 aa12.57□□□□□ -0.4
LINC00339-207ENST00000634712 KLHDC1Q8N7A1 406 aa12.57□□□□□ -0.4
LINC00339-207ENST00000634712 OR56B4Q8NH76 319 aa12.57□□□□□ -0.4
LINC00339-207ENST00000634712 SETD6Q8TBK2 473 aa12.57□□□□□ -0.4
LINC00339-207ENST00000634712 GALMQ96C23 342 aa12.57□□□□□ -0.4
LINC00339-207ENST00000634712 RBM14Q96PK6 669 aaKnown RBP12.57□□□□□ -0.4
LINC00339-207ENST00000634712 RIMS4Q9H426 269 aaPredicted RBP12.57□□□□□ -0.4
LINC00339-207ENST00000634712 RAB22AQ9UL26 194 aa12.57□□□□□ -0.4
LINC00339-207ENST00000634712 SSR3Q9UNL2 185 aa12.57□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 130.6 ms