RNA–Protein interactions for RNA: ENST00000634451.2

LINC00339-206, long intergenic non-protein coding RNA 339, humanhuman

TSL 5

Gene LINC00339, Length 687 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00339-206ENST00000634451 GPER1Q99527 375 aa9.97□□□□□ -0.81
LINC00339-206ENST00000634451 AMBNQ9NP70 447 aa9.97□□□□□ -0.81
LINC00339-206ENST00000634451 ZNF107Q9UII5 783 aaPredicted RBP9.97□□□□□ -0.81
LINC00339-206ENST00000634451 ST3GAL6Q9Y274 331 aa9.97□□□□□ -0.81
LINC00339-206ENST00000634451 FBXO7Q9Y3I1 522 aa9.97□□□□□ -0.81
LINC00339-206ENST00000634451 TMEM30CPA0ZSE6 113 aa9.96□□□□□ -0.82
LINC00339-206ENST00000634451 C12orf77C9JDV5 145 aa9.96□□□□□ -0.82
LINC00339-206ENST00000634451 RRP9O43818 475 aaKnown RBP9.96□□□□□ -0.82
LINC00339-206ENST00000634451 SOX15O60248 233 aa9.96□□□□□ -0.82
LINC00339-206ENST00000634451 IGF1P05019 195 aa9.96□□□□□ -0.82
LINC00339-206ENST00000634451 SERPINA2P20848 420 aa9.96□□□□□ -0.82
LINC00339-206ENST00000634451 CD1BP29016 333 aa9.96□□□□□ -0.82
LINC00339-206ENST00000634451 RBM11P57052 281 aaKnown RBP9.96□□□□□ -0.82
LINC00339-206ENST00000634451 ADARB1P78563 741 aaKnown RBP9.96□□□□□ -0.82
LINC00339-206ENST00000634451 RSU1Q15404 277 aa9.96□□□□□ -0.82
LINC00339-206ENST00000634451 ASCL4Q6XD76 172 aa9.96□□□□□ -0.82
LINC00339-206ENST00000634451 SERPINA12Q8IW75 414 aa9.96□□□□□ -0.82
LINC00339-206ENST00000634451 ACBD7Q8N6N7 88 aa9.96□□□□□ -0.82
LINC00339-206ENST00000634451 OR10A7Q8NGE5 316 aa9.96□□□□□ -0.82
LINC00339-206ENST00000634451 OR5D14Q8NGL3 314 aa9.96□□□□□ -0.82
LINC00339-206ENST00000634451 OR13C5Q8NGS8 318 aa9.96□□□□□ -0.82
LINC00339-206ENST00000634451 ING4Q9UNL4 249 aa9.96□□□□□ -0.82
LINC00339-206ENST00000634451 DHDHQ9UQ10 334 aa9.96□□□□□ -0.82
LINC00339-206ENST00000634451 EXOGQ9Y2C4 368 aaKnown RBP9.96□□□□□ -0.82
LINC00339-206ENST00000634451 AP4S1Q9Y587 144 aa9.96□□□□□ -0.82
LINC00339-206ENST00000634451 IGHV4OR15-8A0A075B7B6 117 aa9.95□□□□□ -0.82
LINC00339-206ENST00000634451 A0A087WW49 117 aa9.95□□□□□ -0.82
LINC00339-206ENST00000634451 SAP30O75446 220 aa9.95□□□□□ -0.82
LINC00339-206ENST00000634451 MT-ND4P03905 459 aa9.95□□□□□ -0.82
LINC00339-206ENST00000634451 GP9P14770 177 aa9.95□□□□□ -0.82
LINC00339-206ENST00000634451 RAB3AP20336 220 aa9.95□□□□□ -0.82
LINC00339-206ENST00000634451 BLVRBP30043 206 aaPredicted RBP9.95□□□□□ -0.82
LINC00339-206ENST00000634451 GABPB1Q06547 395 aaPredicted RBP9.95□□□□□ -0.82
LINC00339-206ENST00000634451 ZNF616Q08AN1 781 aa9.95□□□□□ -0.82
LINC00339-206ENST00000634451 LSAMPQ13449 338 aa9.95□□□□□ -0.82
LINC00339-206ENST00000634451 MMDQ15546 238 aa9.95□□□□□ -0.82
LINC00339-206ENST00000634451 SRSF7Q16629 238 aaKnown RBP eCLIP9.95□□□□□ -0.82
LINC00339-206ENST00000634451 ATAD3CQ5T2N8 411 aa9.95□□□□□ -0.82
LINC00339-206ENST00000634451 SLC16A12Q6ZSM3 486 aa9.95□□□□□ -0.82
LINC00339-206ENST00000634451 SLC25A48Q6ZT89 311 aaKnown RBP9.95□□□□□ -0.82
LINC00339-206ENST00000634451 KCTD20Q7Z5Y7 419 aa9.95□□□□□ -0.82
LINC00339-206ENST00000634451 PRR18Q8N4B5 295 aa9.95□□□□□ -0.82
LINC00339-206ENST00000634451 OR4K15Q8NH41 348 aa9.95□□□□□ -0.82
LINC00339-206ENST00000634451 OR5AK2Q8NH90 309 aa9.95□□□□□ -0.82
LINC00339-206ENST00000634451 ARPC1AQ92747 370 aa9.95□□□□□ -0.82
LINC00339-206ENST00000634451 JAM3Q9BX67 310 aa9.95□□□□□ -0.82
LINC00339-206ENST00000634451 PARP11Q9NR21 331 aa9.95□□□□□ -0.82
LINC00339-206ENST00000634451 FAM118AQ9NWS6 357 aa9.95□□□□□ -0.82
LINC00339-206ENST00000634451 IMPAD1Q9NX62 359 aa9.95□□□□□ -0.82
LINC00339-206ENST00000634451 SIRT4Q9Y6E7 314 aaPredicted RBP9.95□□□□□ -0.82
LINC00339-206ENST00000634451 IGHV7-81A0A0B4J1V7 117 aa9.94□□□□□ -0.82
LINC00339-206ENST00000634451 AIPO00170 330 aa9.94□□□□□ -0.82
LINC00339-206ENST00000634451 OVOL1O14753 267 aa9.94□□□□□ -0.82
LINC00339-206ENST00000634451 IGLV1-40P01703 118 aa9.94□□□□□ -0.82
LINC00339-206ENST00000634451 OR8U8P0C7N1 319 aa9.94□□□□□ -0.82
LINC00339-206ENST00000634451 GABRB1P18505 474 aa9.94□□□□□ -0.82
LINC00339-206ENST00000634451 GALEQ14376 348 aa9.94□□□□□ -0.82
LINC00339-206ENST00000634451 ZNF497Q6ZNH5 498 aa9.94□□□□□ -0.82
LINC00339-206ENST00000634451 OR52M1Q8NGK5 317 aa9.94□□□□□ -0.82
LINC00339-206ENST00000634451 OR52N1Q8NH53 320 aa9.94□□□□□ -0.82
LINC00339-206ENST00000634451 NEK7Q8TDX7 302 aa9.94□□□□□ -0.82
LINC00339-206ENST00000634451 UBE2E2Q96LR5 201 aa9.94□□□□□ -0.82
LINC00339-206ENST00000634451 GON7Q9BXV9 100 aa9.94□□□□□ -0.82
LINC00339-206ENST00000634451 MRPL20Q9BYC9 149 aaKnown RBP9.94□□□□□ -0.82
LINC00339-206ENST00000634451 ANKRD60Q9BZ19 345 aa9.94□□□□□ -0.82
LINC00339-206ENST00000634451 PALMDQ9NP74 551 aa9.94□□□□□ -0.82
LINC00339-206ENST00000634451 ERVK13-1Q9NX77 482 aa9.94□□□□□ -0.82
LINC00339-206ENST00000634451 VSIG4Q9Y279 399 aa9.94□□□□□ -0.82
LINC00339-206ENST00000634451 TMEM212A6NML5 194 aa9.93□□□□□ -0.82
LINC00339-206ENST00000634451 EI24O14681 340 aa9.93□□□□□ -0.82
LINC00339-206ENST00000634451 RPSAP08865 295 aaKnown RBP9.93□□□□□ -0.82
LINC00339-206ENST00000634451 RCC1P18754 421 aaPredicted RBP9.93□□□□□ -0.82
LINC00339-206ENST00000634451 KCNJ3P48549 501 aa9.93□□□□□ -0.82
LINC00339-206ENST00000634451 RAB9AP51151 201 aa9.93□□□□□ -0.82
LINC00339-206ENST00000634451 ZNF137PP52743 207 aa9.93□□□□□ -0.82
LINC00339-206ENST00000634451 ACTBP60709 375 aa9.93□□□□□ -0.82
LINC00339-206ENST00000634451 SNRPGP62308 76 aaKnown RBP9.93□□□□□ -0.82
LINC00339-206ENST00000634451 ECSCRQ19T08 205 aa9.93□□□□□ -0.82
LINC00339-206ENST00000634451 SLC22A6Q4U2R8 563 aa9.93□□□□□ -0.82
LINC00339-206ENST00000634451 ODF3L1Q8IXM7 274 aa9.93□□□□□ -0.82
LINC00339-206ENST00000634451 C8orf31Q8N9H6 132 aa9.93□□□□□ -0.82
LINC00339-206ENST00000634451 OR52L2PQ8NGH6 319 aa9.93□□□□□ -0.82
LINC00339-206ENST00000634451 CITED4Q96RK1 184 aa9.93□□□□□ -0.82
LINC00339-206ENST00000634451 OR51J1Q9H342 316 aa9.93□□□□□ -0.82
LINC00339-206ENST00000634451 IFT22Q9H7X7 185 aa9.93□□□□□ -0.82
LINC00339-206ENST00000634451 EDA2RQ9HAV5 297 aa9.93□□□□□ -0.82
LINC00339-206ENST00000634451 TPSG1Q9NRR2 321 aa9.93□□□□□ -0.82
LINC00339-206ENST00000634451 GNG12Q9UBI6 72 aa9.93□□□□□ -0.82
LINC00339-206ENST00000634451 ENOPH1Q9UHY7 261 aa9.93□□□□□ -0.82
LINC00339-206ENST00000634451 TRAV41A0A0B4J266 112 aa9.92□□□□□ -0.82
LINC00339-206ENST00000634451 FAM90A10PA6NDY2 464 aa9.92□□□□□ -0.82
LINC00339-206ENST00000634451 ORC5O43913 435 aa9.92□□□□□ -0.82
LINC00339-206ENST00000634451 IGHV3-11P01762 117 aa9.92□□□□□ -0.82
LINC00339-206ENST00000634451 HBZP02008 142 aa9.92□□□□□ -0.82
LINC00339-206ENST00000634451 ALPLP05186 524 aa9.92□□□□□ -0.82
LINC00339-206ENST00000634451 GZMHP20718 246 aa9.92□□□□□ -0.82
LINC00339-206ENST00000634451 IL3RAP26951 378 aa9.92□□□□□ -0.82
LINC00339-206ENST00000634451 OR3A3P47888 321 aa9.92□□□□□ -0.82
LINC00339-206ENST00000634451 RUNX1Q01196 453 aa9.92□□□□□ -0.82
LINC00339-206ENST00000634451 C19orf54Q5BKX5 351 aa9.92□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 33.6 ms