RNA–Protein interactions for RNA: ENST00000622183.1

CPNE3-213, Transcript of copine 3, humanhuman

TSL 3

Gene CPNE3, Length 156 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE3-213ENST00000622183 LFNGQ8NES3 379 aa2.49□□□□□ -2.01
CPNE3-213ENST00000622183 APOBEC3DQ96AK3 386 aaPredicted RBP2.49□□□□□ -2.01
CPNE3-213ENST00000622183 UBE2WQ96B02 151 aa2.49□□□□□ -2.01
CPNE3-213ENST00000622183 CEP19Q96LK0 163 aa2.49□□□□□ -2.01
CPNE3-213ENST00000622183 SLC19A3Q9BZV2 496 aa2.49□□□□□ -2.01
CPNE3-213ENST00000622183 ABCG5Q9H222 651 aa2.49□□□□□ -2.01
CPNE3-213ENST00000622183 EURLQ9NYK6 297 aa2.49□□□□□ -2.01
CPNE3-213ENST00000622183 DYSFO75923 2080 aa2.49□□□□□ -2.01
CPNE3-213ENST00000622183 CPDO75976 1380 aa2.49□□□□□ -2.01
CPNE3-213ENST00000622183 CPSF4O95639 269 aaKnown RBP2.48□□□□□ -2.01
CPNE3-213ENST00000622183 IGHMP01871 453 aa2.48□□□□□ -2.01
CPNE3-213ENST00000622183 HLA-DRAP01903 254 aa2.48□□□□□ -2.01
CPNE3-213ENST00000622183 PVALBP20472 110 aaPredicted RBP2.48□□□□□ -2.01
CPNE3-213ENST00000622183 CFL1P23528 166 aaKnown RBP2.48□□□□□ -2.01
CPNE3-213ENST00000622183 COL8A2P25067 703 aa2.48□□□□□ -2.01
CPNE3-213ENST00000622183 MSNP26038 577 aaKnown RBP2.48□□□□□ -2.01
CPNE3-213ENST00000622183 ALX1Q15699 326 aa2.48□□□□□ -2.01
CPNE3-213ENST00000622183 MOGQ16653 247 aa2.48□□□□□ -2.01
CPNE3-213ENST00000622183 EXOC3L4Q17RC7 722 aa2.48□□□□□ -2.01
CPNE3-213ENST00000622183 KRTAP25-1Q3LHN0 102 aa2.48□□□□□ -2.01
CPNE3-213ENST00000622183 LGALSLQ3ZCW2 172 aaPredicted RBP2.48□□□□□ -2.01
CPNE3-213ENST00000622183 DEFB134Q4QY38 66 aa2.48□□□□□ -2.01
CPNE3-213ENST00000622183 TTC33Q6PID6 262 aaPredicted RBP2.48□□□□□ -2.01
CPNE3-213ENST00000622183 LYZL2Q7Z4W2 148 aa2.48□□□□□ -2.01
CPNE3-213ENST00000622183 SLC13A5Q86YT5 568 aaPredicted RBP2.48□□□□□ -2.01
CPNE3-213ENST00000622183 KRTCAP2Q8N6L1 136 aa2.48□□□□□ -2.01
CPNE3-213ENST00000622183 OR11L1Q8NGX0 322 aa2.48□□□□□ -2.01
CPNE3-213ENST00000622183 DDI1Q8WTU0 396 aa2.48□□□□□ -2.01
CPNE3-213ENST00000622183 KCTD4Q8WVF5 259 aa2.48□□□□□ -2.01
CPNE3-213ENST00000622183 TVP23CQ96ET8 276 aa2.48□□□□□ -2.01
CPNE3-213ENST00000622183 CHST5Q9GZS9 411 aa2.48□□□□□ -2.01
CPNE3-213ENST00000622183 WDR54Q9H977 334 aa2.48□□□□□ -2.01
CPNE3-213ENST00000622183 PAQR5Q9NXK6 330 aaPredicted RBP2.48□□□□□ -2.01
CPNE3-213ENST00000622183 ZNF443Q9Y2A4 671 aaPredicted RBP2.48□□□□□ -2.01
CPNE3-213ENST00000622183 PUS1Q9Y606 427 aaKnown RBP eCLIP2.48□□□□□ -2.01
CPNE3-213ENST00000622183 PPIP5K1Q6PFW1 1433 aa2.48□□□□□ -2.01
CPNE3-213ENST00000622183 NID2Q14112 1375 aa2.48□□□□□ -2.01
CPNE3-213ENST00000622183 SHANK1Q9Y566 2161 aa2.47□□□□□ -2.01
CPNE3-213ENST00000622183 TAF1LQ8IZX4 1826 aa2.47□□□□□ -2.01
CPNE3-213ENST00000622183 LOC105371267A0A1B0GV96 52 aa2.47□□□□□ -2.01
CPNE3-213ENST00000622183 A0A1W2PNN7 141 aa2.47□□□□□ -2.01
CPNE3-213ENST00000622183 A6NED7 52 aa2.47□□□□□ -2.01
CPNE3-213ENST00000622183 BIRC5O15392 142 aa2.47□□□□□ -2.01
CPNE3-213ENST00000622183 SOX14O95416 240 aa2.47□□□□□ -2.01
CPNE3-213ENST00000622183 LTAP01374 205 aa2.47□□□□□ -2.01
CPNE3-213ENST00000622183 ORM1P02763 201 aa2.47□□□□□ -2.01
CPNE3-213ENST00000622183 CRABP2P29373 138 aa2.47□□□□□ -2.01
CPNE3-213ENST00000622183 MYL6P60660 151 aa2.47□□□□□ -2.01
CPNE3-213ENST00000622183 VBP1P61758 197 aa2.47□□□□□ -2.01
CPNE3-213ENST00000622183 DYNLL1P63167 89 aaKnown RBP2.47□□□□□ -2.01
CPNE3-213ENST00000622183 SKP1P63208 163 aa2.47□□□□□ -2.01
CPNE3-213ENST00000622183 GTF2BQ00403 316 aa2.47□□□□□ -2.01
CPNE3-213ENST00000622183 DHRS2Q13268 280 aa2.47□□□□□ -2.01
CPNE3-213ENST00000622183 ZNF141Q15928 474 aa2.47□□□□□ -2.01
CPNE3-213ENST00000622183 NDUFA5Q16718 116 aa2.47□□□□□ -2.01
CPNE3-213ENST00000622183 CCDC153Q494R4 210 aa2.47□□□□□ -2.01
CPNE3-213ENST00000622183 SPIN3Q5JUX0 258 aa2.47□□□□□ -2.01
CPNE3-213ENST00000622183 SAPCD1Q5SSQ6 148 aa2.47□□□□□ -2.01
CPNE3-213ENST00000622183 FAM45BPQ6NSW5 357 aa2.47□□□□□ -2.01
CPNE3-213ENST00000622183 WDR59Q6PJI9 974 aa2.47□□□□□ -2.01
CPNE3-213ENST00000622183 CYHR1Q6ZMK1 362 aa2.47□□□□□ -2.01
CPNE3-213ENST00000622183 NIT1Q86X76 327 aa2.47□□□□□ -2.01
CPNE3-213ENST00000622183 EIF4E3Q8N5X7 224 aaKnown RBP2.47□□□□□ -2.01
CPNE3-213ENST00000622183 OR5L1Q8NGL2 311 aa2.47□□□□□ -2.01
CPNE3-213ENST00000622183 OR4A5Q8NH83 315 aa2.47□□□□□ -2.01
CPNE3-213ENST00000622183 ZNF514Q96K75 400 aaPredicted RBP2.47□□□□□ -2.01
CPNE3-213ENST00000622183 ALX4Q9H161 411 aaPredicted RBP2.47□□□□□ -2.01
CPNE3-213ENST00000622183 NAGKQ9UJ70 344 aa2.47□□□□□ -2.01
CPNE3-213ENST00000622183 U3KQK5 164 aa2.47□□□□□ -2.01
CPNE3-213ENST00000622183 NPATQ14207 1427 aa2.47□□□□□ -2.01
CPNE3-213ENST00000622183 SSH2Q76I76 1423 aa2.47□□□□□ -2.01
CPNE3-213ENST00000622183 TNKS1BP1Q9C0C2 1729 aaKnown RBP2.47□□□□□ -2.01
CPNE3-213ENST00000622183 LOXHD1Q8IVV2 1947 aa2.46□□□□□ -2.02
CPNE3-213ENST00000622183 NUP153P49790 1475 aaKnown RBP2.46□□□□□ -2.02
CPNE3-213ENST00000622183 PTPRKQ15262 1439 aa2.46□□□□□ -2.02
CPNE3-213ENST00000622183 IGHV3OR15-7A0A075B7D8 119 aa2.46□□□□□ -2.02
CPNE3-213ENST00000622183 FABP12A6NFH5 140 aa2.46□□□□□ -2.02
CPNE3-213ENST00000622183 GOLGA6L10A6NI86 522 aa2.46□□□□□ -2.02
CPNE3-213ENST00000622183 ARGFXA6NJG6 315 aa2.46□□□□□ -2.02
CPNE3-213ENST00000622183 GGTLC3B5MD39 225 aa2.46□□□□□ -2.02
CPNE3-213ENST00000622183 AHSA1O95433 338 aa2.46□□□□□ -2.02
CPNE3-213ENST00000622183 IGLV6-57P01721 117 aa2.46□□□□□ -2.02
CPNE3-213ENST00000622183 GYPCP04921 128 aa2.46□□□□□ -2.02
CPNE3-213ENST00000622183 GUSBP08236 651 aa2.46□□□□□ -2.02
CPNE3-213ENST00000622183 OCMP0CE72 109 aaPredicted RBP2.46□□□□□ -2.02
CPNE3-213ENST00000622183 CTLA4P16410 223 aa2.46□□□□□ -2.02
CPNE3-213ENST00000622183 S100A1P23297 94 aa2.46□□□□□ -2.02
CPNE3-213ENST00000622183 UBE2G2P60604 165 aa2.46□□□□□ -2.02
CPNE3-213ENST00000622183 IHHQ14623 411 aa2.46□□□□□ -2.02
CPNE3-213ENST00000622183 HENMT1Q5T8I9 393 aaKnown RBP2.46□□□□□ -2.02
CPNE3-213ENST00000622183 HES3Q5TGS1 186 aa2.46□□□□□ -2.02
CPNE3-213ENST00000622183 VN1R4Q7Z5H5 301 aa2.46□□□□□ -2.02
CPNE3-213ENST00000622183 SLC51BQ86UW2 128 aa2.46□□□□□ -2.02
CPNE3-213ENST00000622183 OR5D18Q8NGL1 313 aa2.46□□□□□ -2.02
CPNE3-213ENST00000622183 OR9I1Q8NGQ6 314 aa2.46□□□□□ -2.02
CPNE3-213ENST00000622183 SPPL2BQ8TCT7 592 aa2.46□□□□□ -2.02
CPNE3-213ENST00000622183 CHMP6Q96FZ7 201 aa2.46□□□□□ -2.02
CPNE3-213ENST00000622183 TRIB3Q96RU7 358 aa2.46□□□□□ -2.02
CPNE3-213ENST00000622183 GPR22Q99680 433 aa2.46□□□□□ -2.02
CPNE3-213ENST00000622183 OR5V1Q9UGF6 321 aa2.46□□□□□ -2.02
Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms