RNA–Protein interactions for RNA: ENST00000621016.4

CDH1-214, Transcript of cadherin 1, humanhuman

TSL 5 BASIC

Gene CDH1, Length 3,304 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH1-214ENST00000621016 LOXL4Q96JB6 756 aa9.26□□□□□ -0.93
CDH1-214ENST00000621016 HIPK2Q9H2X6 1198 aa9.26□□□□□ -0.93
CDH1-214ENST00000621016 C19orf25Q9UFG5 118 aaPredicted RBP9.26□□□□□ -0.93
CDH1-214ENST00000621016 PRR14LQ5THK1 2151 aa9.25□□□□□ -0.93
CDH1-214ENST00000621016 KIAA2026Q5HYC2 2103 aa9.25□□□□□ -0.93
CDH1-214ENST00000621016 CXCL13O43927 109 aa9.25□□□□□ -0.93
CDH1-214ENST00000621016 IL2RAP01589 272 aa9.25□□□□□ -0.93
CDH1-214ENST00000621016 MELTFP08582 738 aa9.25□□□□□ -0.93
CDH1-214ENST00000621016 PTGER4P35408 488 aa9.25□□□□□ -0.93
CDH1-214ENST00000621016 PIGPP57054 158 aa9.25□□□□□ -0.93
CDH1-214ENST00000621016 SPIN3Q5JUX0 258 aa9.25□□□□□ -0.93
CDH1-214ENST00000621016 ZNF429Q86V71 674 aa9.25□□□□□ -0.93
CDH1-214ENST00000621016 OR5T1Q8NG75 326 aa9.25□□□□□ -0.93
CDH1-214ENST00000621016 MAFAQ8NHW3 353 aaPredicted RBP9.25□□□□□ -0.93
CDH1-214ENST00000621016 VN1R17PQ8TDU5 208 aa9.25□□□□□ -0.93
CDH1-214ENST00000621016 EDAQ92838 391 aa9.25□□□□□ -0.93
CDH1-214ENST00000621016 PINX1Q96BK5 328 aaKnown RBP9.25□□□□□ -0.93
CDH1-214ENST00000621016 ABHD14AQ9BUJ0 271 aa9.25□□□□□ -0.93
CDH1-214ENST00000621016 SH3BGRL3Q9H299 93 aa9.25□□□□□ -0.93
CDH1-214ENST00000621016 P4HTMQ9NXG6 502 aa9.25□□□□□ -0.93
CDH1-214ENST00000621016 NAGKQ9UJ70 344 aa9.25□□□□□ -0.93
CDH1-214ENST00000621016 LAMP3Q9UQV4 416 aa9.25□□□□□ -0.93
CDH1-214ENST00000621016 SIT1Q9Y3P8 196 aa9.25□□□□□ -0.93
CDH1-214ENST00000621016 PSG1P11464 419 aa9.25□□□□□ -0.93
CDH1-214ENST00000621016 TAS2R31P59538 309 aa9.25□□□□□ -0.93
CDH1-214ENST00000621016 WIPI1Q5MNZ9 446 aaPredicted RBP9.25□□□□□ -0.93
CDH1-214ENST00000621016 RPS19BP1Q86WX3 136 aaKnown RBP9.25□□□□□ -0.93
CDH1-214ENST00000621016 MCEMP1Q8IX19 187 aa9.25□□□□□ -0.93
CDH1-214ENST00000621016 FBXL14Q8N1E6 418 aa9.25□□□□□ -0.93
CDH1-214ENST00000621016 SPEM1Q8N4L4 309 aa9.25□□□□□ -0.93
CDH1-214ENST00000621016 FNDC9Q8TBE3 224 aa9.25□□□□□ -0.93
CDH1-214ENST00000621016 CORO2AQ92828 525 aa9.25□□□□□ -0.93
CDH1-214ENST00000621016 PTX4Q96A99 478 aa9.25□□□□□ -0.93
CDH1-214ENST00000621016 TECTBQ96PL2 329 aa9.25□□□□□ -0.93
CDH1-214ENST00000621016 CABLES2Q9BTV7 478 aa9.25□□□□□ -0.93
CDH1-214ENST00000621016 ZNF442Q9H7R0 627 aa9.25□□□□□ -0.93
CDH1-214ENST00000621016 PLA2G3Q9NZ20 509 aa9.25□□□□□ -0.93
CDH1-214ENST00000621016 TNRC18O15417 2968 aaPredicted RBP9.25□□□□□ -0.93
CDH1-214ENST00000621016 C10orf142B7Z368 130 aa9.25□□□□□ -0.93
CDH1-214ENST00000621016 SAP30O75446 220 aa9.25□□□□□ -0.93
CDH1-214ENST00000621016 CYCSP99999 105 aaKnown RBP9.25□□□□□ -0.93
CDH1-214ENST00000621016 SLC23A3Q6PIS1 610 aa9.25□□□□□ -0.93
CDH1-214ENST00000621016 CALHM1Q8IU99 346 aa9.25□□□□□ -0.93
CDH1-214ENST00000621016 SGPP2Q8IWX5 399 aa9.25□□□□□ -0.93
CDH1-214ENST00000621016 CYB561D1Q8N8Q1 229 aa9.25□□□□□ -0.93
CDH1-214ENST00000621016 SRXN1Q9BYN0 137 aa9.25□□□□□ -0.93
CDH1-214ENST00000621016 FOXD3Q9UJU5 478 aaPredicted RBP9.25□□□□□ -0.93
CDH1-214ENST00000621016 LIPGQ9Y5X9 500 aa9.25□□□□□ -0.93
CDH1-214ENST00000621016 NSG1A0A0A6YYJ2 146 aa9.24□□□□□ -0.93
CDH1-214ENST00000621016 A0A1W2PNV4 684 aa9.24□□□□□ -0.93
CDH1-214ENST00000621016 DHRS3O75911 302 aa9.24□□□□□ -0.93
CDH1-214ENST00000621016 GCGP01275 180 aa9.24□□□□□ -0.93
CDH1-214ENST00000621016 RFPL3SP0C7P2 107 aa9.24□□□□□ -0.93
CDH1-214ENST00000621016 FCGR2CP31995 323 aa9.24□□□□□ -0.93
CDH1-214ENST00000621016 NTF4P34130 210 aa9.24□□□□□ -0.93
CDH1-214ENST00000621016 UBE2V1Q13404 147 aa9.24□□□□□ -0.93
CDH1-214ENST00000621016 IGFBP7Q16270 282 aa9.24□□□□□ -0.93
CDH1-214ENST00000621016 EXT1Q16394 746 aa9.24□□□□□ -0.93
CDH1-214ENST00000621016 RSPO1Q2MKA7 263 aaPredicted RBP9.24□□□□□ -0.93
CDH1-214ENST00000621016 LYZL2Q7Z4W2 148 aa9.24□□□□□ -0.93
CDH1-214ENST00000621016 TMEM123Q8N131 208 aa9.24□□□□□ -0.93
CDH1-214ENST00000621016 BORCS8Q96FH0 119 aa9.24□□□□□ -0.93
CDH1-214ENST00000621016 TXN2Q99757 166 aa9.24□□□□□ -0.93
CDH1-214ENST00000621016 SLC5A7Q9GZV3 580 aa9.24□□□□□ -0.93
CDH1-214ENST00000621016 CHRNA10Q9GZZ6 450 aa9.24□□□□□ -0.93
CDH1-214ENST00000621016 ZNF552Q9H707 407 aaPredicted RBP9.24□□□□□ -0.93
CDH1-214ENST00000621016 PRDM6Q9NQX0 595 aa9.24□□□□□ -0.93
CDH1-214ENST00000621016 DOCK10Q96BY6 2186 aa9.24□□□□□ -0.93
CDH1-214ENST00000621016 E5RGE8 158 aa9.24□□□□□ -0.93
CDH1-214ENST00000621016 UMODP07911 640 aa9.24□□□□□ -0.93
CDH1-214ENST00000621016 LMO1P25800 156 aa9.24□□□□□ -0.93
CDH1-214ENST00000621016 EPHA8P29322 1005 aaPredicted RBP9.24□□□□□ -0.93
CDH1-214ENST00000621016 RPL12P30050 165 aaKnown RBP9.24□□□□□ -0.93
CDH1-214ENST00000621016 SULT1A2P50226 295 aa9.24□□□□□ -0.93
CDH1-214ENST00000621016 SUMO3P55854 103 aaPredicted RBP9.24□□□□□ -0.93
CDH1-214ENST00000621016 GRB2P62993 217 aaKnown RBP9.24□□□□□ -0.93
CDH1-214ENST00000621016 ENDOGQ14249 297 aaKnown RBP9.24□□□□□ -0.93
CDH1-214ENST00000621016 OCIAD2Q56VL3 154 aa9.24□□□□□ -0.93
CDH1-214ENST00000621016 DPPA3Q6W0C5 159 aa9.24□□□□□ -0.93
CDH1-214ENST00000621016 TMEM182Q6ZP80 229 aaPredicted RBP9.24□□□□□ -0.93
CDH1-214ENST00000621016 UBALD1Q8TB05 177 aa9.24□□□□□ -0.93
CDH1-214ENST00000621016 TMEM18Q96B42 140 aa9.24□□□□□ -0.93
CDH1-214ENST00000621016 C2orf50Q96LR7 162 aa9.24□□□□□ -0.93
CDH1-214ENST00000621016 YPEL4Q96NS1 127 aa9.24□□□□□ -0.93
CDH1-214ENST00000621016 MS4A10Q96PG2 267 aa9.24□□□□□ -0.93
CDH1-214ENST00000621016 MAGT1Q9H0U3 335 aa9.24□□□□□ -0.93
CDH1-214ENST00000621016 LIME1Q9H400 295 aa9.24□□□□□ -0.93
CDH1-214ENST00000621016 FBXL17Q9UF56 701 aa9.24□□□□□ -0.93
CDH1-214ENST00000621016 FUT9Q9Y231 359 aa9.24□□□□□ -0.93
CDH1-214ENST00000621016 TMED3Q9Y3Q3 217 aa9.24□□□□□ -0.93
CDH1-214ENST00000621016 ROS1P08922 2347 aa9.24□□□□□ -0.93
CDH1-214ENST00000621016 IFNA21P01568 189 aa9.23□□□□□ -0.93
CDH1-214ENST00000621016 OR5AC1P0C628 307 aa9.23□□□□□ -0.93
CDH1-214ENST00000621016 ZNF32P17041 273 aa9.23□□□□□ -0.93
CDH1-214ENST00000621016 CFPP27918 469 aa9.23□□□□□ -0.93
CDH1-214ENST00000621016 TMEM33P57088 247 aa9.23□□□□□ -0.93
CDH1-214ENST00000621016 FGFBP3Q8TAT2 258 aa9.23□□□□□ -0.93
CDH1-214ENST00000621016 SPTSSAQ969W0 71 aa9.23□□□□□ -0.93
CDH1-214ENST00000621016 CST9LQ9H4G1 147 aa9.23□□□□□ -0.93
CDH1-214ENST00000621016 AK3Q9UIJ7 227 aa9.23□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms