RNA–Protein interactions for RNA: ENST00000620864.1

COLCA1-205, Transcript of colorectal cancer associated 1, humanhuman

TSL 1 (best) BASIC

Gene COLCA1, Length 8,098 nt, Biotype antisense RNA, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COLCA1-205ENST00000620864 IGHV3-20A0A0C4DH32 117 aa6.33□□□□□ -1.4
COLCA1-205ENST00000620864 NPIPB9F8W1W9 429 aa6.33□□□□□ -1.4
COLCA1-205ENST00000620864 CDX4O14627 284 aaPredicted RBP6.33□□□□□ -1.4
COLCA1-205ENST00000620864 HOXD9P28356 352 aaPredicted RBP6.33□□□□□ -1.4
COLCA1-205ENST00000620864 LYZP61626 148 aa6.33□□□□□ -1.4
COLCA1-205ENST00000620864 FAM71F2Q6NXP2 309 aa6.33□□□□□ -1.4
COLCA1-205ENST00000620864 C1orf174Q8IYL3 243 aa6.33□□□□□ -1.4
COLCA1-205ENST00000620864 OR13C6PQ8NH95 151 aa6.33□□□□□ -1.4
COLCA1-205ENST00000620864 ANAPC13Q9BS18 74 aa6.33□□□□□ -1.4
COLCA1-205ENST00000620864 ALKBH7Q9BT30 221 aaPredicted RBP6.33□□□□□ -1.4
COLCA1-205ENST00000620864 PLA2G2FQ9BZM2 168 aa6.33□□□□□ -1.4
COLCA1-205ENST00000620864 MIXL1Q9H2W2 232 aa6.33□□□□□ -1.4
COLCA1-205ENST00000620864 NCOR1P1Q9H4R4 102 aa6.33□□□□□ -1.4
COLCA1-205ENST00000620864 FCMRO60667 390 aa6.33□□□□□ -1.4
COLCA1-205ENST00000620864 EPPINO95925 133 aa6.33□□□□□ -1.4
COLCA1-205ENST00000620864 ZNF788Q6ZQV5 615 aa6.33□□□□□ -1.4
COLCA1-205ENST00000620864 BAHD1Q8TBE0 780 aaPredicted RBP6.33□□□□□ -1.4
COLCA1-205ENST00000620864 GALNT14Q96FL9 552 aa6.33□□□□□ -1.4
COLCA1-205ENST00000620864 C4orf45Q96LM5 186 aa6.33□□□□□ -1.4
COLCA1-205ENST00000620864 SIGMAR1Q99720 223 aa6.33□□□□□ -1.4
COLCA1-205ENST00000620864 SLC25A37Q9NYZ2 338 aa6.33□□□□□ -1.4
COLCA1-205ENST00000620864 NRAPQ86VF7 1730 aa6.33□□□□□ -1.4
COLCA1-205ENST00000620864 LTBRP36941 435 aa6.33□□□□□ -1.4
COLCA1-205ENST00000620864 GUCA2AQ02747 115 aa6.33□□□□□ -1.4
COLCA1-205ENST00000620864 ZNF77Q15935 545 aa6.33□□□□□ -1.4
COLCA1-205ENST00000620864 TEX37Q96LM6 180 aa6.33□□□□□ -1.4
COLCA1-205ENST00000620864 C20orf141Q9NUB4 165 aa6.33□□□□□ -1.4
COLCA1-205ENST00000620864 MFAP2P55001 183 aa6.33□□□□□ -1.4
COLCA1-205ENST00000620864 EWSR1Q01844 656 aaKnown RBP eCLIP6.33□□□□□ -1.4
COLCA1-205ENST00000620864 LRRC75BQ2VPJ9 315 aa6.33□□□□□ -1.4
COLCA1-205ENST00000620864 STPG3Q8N7X2 389 aa6.33□□□□□ -1.4
COLCA1-205ENST00000620864 OR4P4Q8NGL7 312 aa6.33□□□□□ -1.4
COLCA1-205ENST00000620864 NT5CQ8TCD5 201 aa6.33□□□□□ -1.4
COLCA1-205ENST00000620864 TMEM190Q8WZ59 177 aa6.33□□□□□ -1.4
COLCA1-205ENST00000620864 SCN9AQ15858 1988 aa6.33□□□□□ -1.4
COLCA1-205ENST00000620864 C7orf66A4D0T2 115 aa6.33□□□□□ -1.4
COLCA1-205ENST00000620864 FAM157BP0CG42 384 aa6.33□□□□□ -1.4
COLCA1-205ENST00000620864 RAC3P60763 192 aa6.33□□□□□ -1.4
COLCA1-205ENST00000620864 ANKRD34AQ69YU3 496 aa6.33□□□□□ -1.4
COLCA1-205ENST00000620864 ZNF740Q8NDX6 193 aa6.33□□□□□ -1.4
COLCA1-205ENST00000620864 R3HDM4Q96D70 268 aa6.33□□□□□ -1.4
COLCA1-205ENST00000620864 RPP25Q9BUL9 199 aaKnown RBP6.33□□□□□ -1.4
COLCA1-205ENST00000620864 SARGQ9BW04 601 aa6.33□□□□□ -1.4
COLCA1-205ENST00000620864 DSPPQ9NZW4 1301 aa6.33□□□□□ -1.4
COLCA1-205ENST00000620864 A0A0U1RQS6 177 aa6.32□□□□□ -1.4
COLCA1-205ENST00000620864 CD1AP06126 327 aa6.32□□□□□ -1.4
COLCA1-205ENST00000620864 ZNF735P0CB33 412 aa6.32□□□□□ -1.4
COLCA1-205ENST00000620864 ATP5IP56385 69 aaPredicted RBP6.32□□□□□ -1.4
COLCA1-205ENST00000620864 HERPUD1Q15011 391 aa6.32□□□□□ -1.4
COLCA1-205ENST00000620864 ANKRD37Q7Z713 158 aa6.32□□□□□ -1.4
COLCA1-205ENST00000620864 TGIF2LYQ8IUE0 185 aa6.32□□□□□ -1.4
COLCA1-205ENST00000620864 OR8G5Q8NG78 346 aa6.32□□□□□ -1.4
COLCA1-205ENST00000620864 OR11G2Q8NGC1 345 aa6.32□□□□□ -1.4
COLCA1-205ENST00000620864 MS4A3Q96HJ5 214 aa6.32□□□□□ -1.4
COLCA1-205ENST00000620864 MRGPRX1Q96LB2 322 aa6.32□□□□□ -1.4
COLCA1-205ENST00000620864 UBE2L6O14933 153 aa6.32□□□□□ -1.4
COLCA1-205ENST00000620864 PRKRAO75569 313 aaKnown RBP6.32□□□□□ -1.4
COLCA1-205ENST00000620864 CKS2P33552 79 aa6.32□□□□□ -1.4
COLCA1-205ENST00000620864 HMGA2P52926 109 aa6.32□□□□□ -1.4
COLCA1-205ENST00000620864 PRSS12P56730 875 aa6.32□□□□□ -1.4
COLCA1-205ENST00000620864 LCN2P80188 198 aa6.32□□□□□ -1.4
COLCA1-205ENST00000620864 MEF2BQ02080 365 aaPredicted RBP6.32□□□□□ -1.4
COLCA1-205ENST00000620864 MOGAT3Q86VF5 341 aa6.32□□□□□ -1.4
COLCA1-205ENST00000620864 OR8I2Q8N0Y5 310 aa6.32□□□□□ -1.4
COLCA1-205ENST00000620864 BATF2Q8N1L9 274 aa6.32□□□□□ -1.4
COLCA1-205ENST00000620864 ZPLD1Q8TCW7 415 aa6.32□□□□□ -1.4
COLCA1-205ENST00000620864 MRPL16Q9NX20 251 aaKnown RBP6.32□□□□□ -1.4
COLCA1-205ENST00000620864 CISD1Q9NZ45 108 aaKnown RBP6.32□□□□□ -1.4
COLCA1-205ENST00000620864 MOSPD3O75425 235 aa6.32□□□□□ -1.4
COLCA1-205ENST00000620864 SEMG1P04279 462 aa6.32□□□□□ -1.4
COLCA1-205ENST00000620864 ZNF117Q03924 483 aa6.32□□□□□ -1.4
COLCA1-205ENST00000620864 WDR25Q64LD2 544 aaPredicted RBP6.32□□□□□ -1.4
COLCA1-205ENST00000620864 OR2Y1Q8NGV0 311 aa6.32□□□□□ -1.4
COLCA1-205ENST00000620864 OR2V1Q8NHB1 315 aa6.32□□□□□ -1.4
COLCA1-205ENST00000620864 MGST2Q99735 147 aa6.32□□□□□ -1.4
COLCA1-205ENST00000620864 AICDAQ9GZX7 198 aa6.32□□□□□ -1.4
COLCA1-205ENST00000620864 DDX60Q8IY21 1712 aaKnown RBP6.32□□□□□ -1.4
COLCA1-205ENST00000620864 HMX2A2RU54 273 aa6.32□□□□□ -1.4
COLCA1-205ENST00000620864 TMEM189A5PLL7 270 aa6.32□□□□□ -1.4
COLCA1-205ENST00000620864 NPIPB8E9PQR5 432 aa6.32□□□□□ -1.4
COLCA1-205ENST00000620864 LDLRAD4O15165 306 aa6.32□□□□□ -1.4
COLCA1-205ENST00000620864 NPIPB7O75200 414 aa6.32□□□□□ -1.4
COLCA1-205ENST00000620864 MRPL52Q86TS9 123 aaKnown RBP6.32□□□□□ -1.4
COLCA1-205ENST00000620864 OR4D9Q8NGE8 314 aa6.32□□□□□ -1.4
COLCA1-205ENST00000620864 SSBP4Q9BWG4 385 aaPredicted RBP6.32□□□□□ -1.4
COLCA1-205ENST00000620864 ZNF430Q9H8G1 570 aaPredicted RBP6.32□□□□□ -1.4
COLCA1-205ENST00000620864 COX11Q9Y6N1 276 aa6.32□□□□□ -1.4
COLCA1-205ENST00000620864 PAGE4O60829 102 aa6.32□□□□□ -1.4
COLCA1-205ENST00000620864 VENTXO95231 258 aa6.32□□□□□ -1.4
COLCA1-205ENST00000620864 TRGC1P0CF51 173 aa6.32□□□□□ -1.4
COLCA1-205ENST00000620864 PLAURQ03405 335 aa6.32□□□□□ -1.4
COLCA1-205ENST00000620864 FAM53AQ6NSI3 398 aaPredicted RBP6.32□□□□□ -1.4
COLCA1-205ENST00000620864 SSC4DQ8WTU2 575 aa6.32□□□□□ -1.4
COLCA1-205ENST00000620864 EMC6Q9BV81 110 aa6.32□□□□□ -1.4
COLCA1-205ENST00000620864 GGACTQ9BVM4 153 aa6.32□□□□□ -1.4
COLCA1-205ENST00000620864 TUBD1Q9UJT1 453 aa6.32□□□□□ -1.4
COLCA1-205ENST00000620864 A0A1W2PR48 441 aa6.32□□□□□ -1.4
COLCA1-205ENST00000620864 SKP2Q13309 424 aa6.32□□□□□ -1.4
COLCA1-205ENST00000620864 IBA57Q5T440 356 aaKnown RBP6.32□□□□□ -1.4
COLCA1-205ENST00000620864 ZNF880Q6PDB4 577 aa6.32□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 40.7 ms