RNA–Protein interactions for RNA: ENST00000618836.4

UBE2D3-233, Transcript of ubiquitin conjugating enzyme E2 D3, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene UBE2D3, Length 3,472 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2D3-233ENST00000618836 OR4N5Q8IXE1 308 aa3.44□□□□□ -1.86
UBE2D3-233ENST00000618836 TMEM37Q8WXS4 190 aa3.44□□□□□ -1.86
UBE2D3-233ENST00000618836 NDRG1Q92597 394 aaKnown RBP3.44□□□□□ -1.86
UBE2D3-233ENST00000618836 TMEM106AQ96A25 262 aa3.44□□□□□ -1.86
UBE2D3-233ENST00000618836 DERL3Q96Q80 235 aa3.44□□□□□ -1.86
UBE2D3-233ENST00000618836 LYSMD1Q96S90 227 aa3.44□□□□□ -1.86
UBE2D3-233ENST00000618836 SAMD10Q9BYL1 202 aa3.44□□□□□ -1.86
UBE2D3-233ENST00000618836 VSIRQ9H7M9 311 aa3.44□□□□□ -1.86
UBE2D3-233ENST00000618836 APOBEC3GQ9HC16 384 aaKnown RBP3.44□□□□□ -1.86
UBE2D3-233ENST00000618836 CROCCQ5TZA2 2017 aa3.44□□□□□ -1.86
UBE2D3-233ENST00000618836 ATAD5Q96QE3 1844 aa3.44□□□□□ -1.86
UBE2D3-233ENST00000618836 DMDP11532 3685 aa3.44□□□□□ -1.86
UBE2D3-233ENST00000618836 TRIP11Q15643 1979 aa3.43□□□□□ -1.86
UBE2D3-233ENST00000618836 C5orf42Q9H799 3197 aa3.43□□□□□ -1.86
UBE2D3-233ENST00000618836 IGHV1-69-2A0A0G2JMI3 117 aa3.43□□□□□ -1.86
UBE2D3-233ENST00000618836 UBE2QL1A1L167 161 aa3.43□□□□□ -1.86
UBE2D3-233ENST00000618836 CEACAM18A8MTB9 384 aa3.43□□□□□ -1.86
UBE2D3-233ENST00000618836 SAP18O00422 153 aaKnown RBP3.43□□□□□ -1.86
UBE2D3-233ENST00000618836 HIST1H2BKO60814 126 aa3.43□□□□□ -1.86
UBE2D3-233ENST00000618836 APOA2P02652 100 aa3.43□□□□□ -1.86
UBE2D3-233ENST00000618836 CATP04040 527 aaKnown RBP3.43□□□□□ -1.86
UBE2D3-233ENST00000618836 HIST1H2BJP06899 126 aa3.43□□□□□ -1.86
UBE2D3-233ENST00000618836 HIST1H2BOP23527 126 aa3.43□□□□□ -1.86
UBE2D3-233ENST00000618836 ACRV1P26436 265 aa3.43□□□□□ -1.86
UBE2D3-233ENST00000618836 HIST1H2BBP33778 126 aa3.43□□□□□ -1.86
UBE2D3-233ENST00000618836 HIST1H2BDP58876 126 aa3.43□□□□□ -1.86
UBE2D3-233ENST00000618836 HIST1H2BCP62807 126 aa3.43□□□□□ -1.86
UBE2D3-233ENST00000618836 HIST2H2BEQ16778 126 aa3.43□□□□□ -1.86
UBE2D3-233ENST00000618836 PRR30Q53SZ7 412 aaPredicted RBP3.43□□□□□ -1.86
UBE2D3-233ENST00000618836 HIST2H2BFQ5QNW6 126 aaPredicted RBP3.43□□□□□ -1.86
UBE2D3-233ENST00000618836 C1orf195Q5TG92 126 aa3.43□□□□□ -1.86
UBE2D3-233ENST00000618836 PNPLA5Q7Z6Z6 429 aaPredicted RBP3.43□□□□□ -1.86
UBE2D3-233ENST00000618836 TMEM183AQ8IXX5 376 aa3.43□□□□□ -1.86
UBE2D3-233ENST00000618836 OR1B1Q8NGR6 318 aa3.43□□□□□ -1.86
UBE2D3-233ENST00000618836 OR2K2Q8NGT1 345 aa3.43□□□□□ -1.86
UBE2D3-233ENST00000618836 OR5P3Q8WZ94 311 aa3.43□□□□□ -1.86
UBE2D3-233ENST00000618836 RDH5Q92781 318 aa3.43□□□□□ -1.86
UBE2D3-233ENST00000618836 HIST1H2BHQ93079 126 aa3.43□□□□□ -1.86
UBE2D3-233ENST00000618836 HIST1H2BNQ99877 126 aa3.43□□□□□ -1.86
UBE2D3-233ENST00000618836 HIST1H2BMQ99879 126 aa3.43□□□□□ -1.86
UBE2D3-233ENST00000618836 SLC25A39Q9BZJ4 359 aaPredicted RBP3.43□□□□□ -1.86
UBE2D3-233ENST00000618836 MAGIXQ9H6Y5 334 aa3.43□□□□□ -1.86
UBE2D3-233ENST00000618836 SEC61A2Q9H9S3 476 aa3.43□□□□□ -1.86
UBE2D3-233ENST00000618836 MMP26Q9NRE1 261 aa3.43□□□□□ -1.86
UBE2D3-233ENST00000618836 VDAC3Q9Y277 283 aa3.43□□□□□ -1.86
UBE2D3-233ENST00000618836 ZNF780BQ9Y6R6 833 aa3.43□□□□□ -1.86
UBE2D3-233ENST00000618836 FAM95CA0A1B0GW59 222 aa3.43□□□□□ -1.86
UBE2D3-233ENST00000618836 ZNF705EA8MWA4 302 aaPredicted RBP3.43□□□□□ -1.86
UBE2D3-233ENST00000618836 AGFG2O95081 481 aa3.43□□□□□ -1.86
UBE2D3-233ENST00000618836 CLDN1O95832 211 aa3.43□□□□□ -1.86
UBE2D3-233ENST00000618836 TTRP02766 147 aa3.43□□□□□ -1.86
UBE2D3-233ENST00000618836 FAM106CPP0CH98 169 aa3.43□□□□□ -1.86
UBE2D3-233ENST00000618836 FABP4P15090 132 aa3.43□□□□□ -1.86
UBE2D3-233ENST00000618836 IGFBP6P24592 240 aaPredicted RBP3.43□□□□□ -1.86
UBE2D3-233ENST00000618836 OR10J1P30954 320 aa3.43□□□□□ -1.86
UBE2D3-233ENST00000618836 MAP1BP46821 2468 aaKnown RBP3.43□□□□□ -1.86
UBE2D3-233ENST00000618836 POLR2HP52434 150 aaKnown RBP3.43□□□□□ -1.86
UBE2D3-233ENST00000618836 GP2P55259 537 aaKnown RBP3.43□□□□□ -1.86
UBE2D3-233ENST00000618836 RAB40BQ12829 278 aa3.43□□□□□ -1.86
UBE2D3-233ENST00000618836 SLC25A35Q3KQZ1 300 aa3.43□□□□□ -1.86
UBE2D3-233ENST00000618836 TDRG1Q3Y452 100 aa3.43□□□□□ -1.86
UBE2D3-233ENST00000618836 FAM106AQ4KMX7 169 aa3.43□□□□□ -1.86
UBE2D3-233ENST00000618836 TP53I3Q53FA7 332 aa3.43□□□□□ -1.86
UBE2D3-233ENST00000618836 DNAJC24Q6P3W2 148 aa3.43□□□□□ -1.86
UBE2D3-233ENST00000618836 ARL9Q6T311 187 aa3.43□□□□□ -1.86
UBE2D3-233ENST00000618836 RPTNQ6XPR3 784 aa3.43□□□□□ -1.86
UBE2D3-233ENST00000618836 ZNF705AQ6ZN79 300 aaPredicted RBP3.43□□□□□ -1.86
UBE2D3-233ENST00000618836 LRRTM1Q86UE6 522 aa3.43□□□□□ -1.86
UBE2D3-233ENST00000618836 FTMTQ8N4E7 242 aa3.43□□□□□ -1.86
UBE2D3-233ENST00000618836 KRTCAP2Q8N6L1 136 aa3.43□□□□□ -1.86
UBE2D3-233ENST00000618836 LRRC57Q8N9N7 239 aa3.43□□□□□ -1.86
UBE2D3-233ENST00000618836 OR2AJ1Q8NGZ0 328 aa3.43□□□□□ -1.86
UBE2D3-233ENST00000618836 Q8TCH9 128 aa3.43□□□□□ -1.86
UBE2D3-233ENST00000618836 TMEM170AQ8WVE7 144 aa3.43□□□□□ -1.86
UBE2D3-233ENST00000618836 ZBTB45Q96K62 511 aaPredicted RBP3.43□□□□□ -1.86
UBE2D3-233ENST00000618836 ANAPC13Q9BS18 74 aa3.43□□□□□ -1.86
UBE2D3-233ENST00000618836 SMIM3Q9BZL3 60 aa3.43□□□□□ -1.86
UBE2D3-233ENST00000618836 COA1Q9GZY4 146 aa3.43□□□□□ -1.86
UBE2D3-233ENST00000618836 SH2D2AQ9NP31 389 aa3.43□□□□□ -1.86
UBE2D3-233ENST00000618836 DNAJC27Q9NZQ0 273 aa3.43□□□□□ -1.86
UBE2D3-233ENST00000618836 NUDT5Q9UKK9 219 aa3.43□□□□□ -1.86
UBE2D3-233ENST00000618836 LSM4Q9Y4Z0 139 aaKnown RBP3.43□□□□□ -1.86
UBE2D3-233ENST00000618836 SNX11Q9Y5W9 270 aa3.43□□□□□ -1.86
UBE2D3-233ENST00000618836 BIRC6Q9NR09 4857 aa3.43□□□□□ -1.86
UBE2D3-233ENST00000618836 NBPF19A0A087WUL8 3843 aa3.43□□□□□ -1.86
UBE2D3-233ENST00000618836 TRAV24A0A0B4J272 114 aa3.43□□□□□ -1.86
UBE2D3-233ENST00000618836 DHRS12A0PJE2 317 aa3.43□□□□□ -1.86
UBE2D3-233ENST00000618836 B4DEV8 164 aa3.43□□□□□ -1.86
UBE2D3-233ENST00000618836 C9JAW5 83 aa3.43□□□□□ -1.86
UBE2D3-233ENST00000618836 CLDN14O95500 239 aa3.43□□□□□ -1.86
UBE2D3-233ENST00000618836 ELANEP08246 267 aa3.43□□□□□ -1.86
UBE2D3-233ENST00000618836 LAMP1P11279 417 aa3.43□□□□□ -1.86
UBE2D3-233ENST00000618836 CNTFRP26992 372 aa3.43□□□□□ -1.86
UBE2D3-233ENST00000618836 HOXD3P31249 432 aaPredicted RBP3.43□□□□□ -1.86
UBE2D3-233ENST00000618836 MRPS6P82932 125 aaKnown RBP3.43□□□□□ -1.86
UBE2D3-233ENST00000618836 MYL5Q02045 173 aa3.43□□□□□ -1.86
UBE2D3-233ENST00000618836 HMGN3Q15651 99 aa3.43□□□□□ -1.86
UBE2D3-233ENST00000618836 C1QL2Q7Z5L3 287 aa3.43□□□□□ -1.86
UBE2D3-233ENST00000618836 PPP1R27Q86WC6 154 aa3.43□□□□□ -1.86
UBE2D3-233ENST00000618836 TMEM219Q86XT9 240 aa3.43□□□□□ -1.86
Retrieved 100 of 20,778 RNA–protein pairs in 72.2 ms