RNA–Protein interactions for RNA: ENST00000618606.1

TARDBP-220, Transcript of TAR DNA binding protein, humanhuman

TSL 2

Gene TARDBP, Length 584 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TARDBP-220ENST00000618606 TSGA10Q9BZW7 698 aa1.26□□□□□ -2.21
TARDBP-220ENST00000618606 SLC22A4Q9H015 551 aa1.26□□□□□ -2.21
TARDBP-220ENST00000618606 VSIRQ9H7M9 311 aa1.26□□□□□ -2.21
TARDBP-220ENST00000618606 UCK1Q9HA47 277 aa1.26□□□□□ -2.21
TARDBP-220ENST00000618606 FGFR1OP2Q9NVK5 253 aa1.26□□□□□ -2.21
TARDBP-220ENST00000618606 MARCOQ9UEW3 520 aaPredicted RBP1.26□□□□□ -2.21
TARDBP-220ENST00000618606 C3orf18Q9UK00 162 aa1.26□□□□□ -2.21
TARDBP-220ENST00000618606 OR51B4Q9Y5P0 310 aa1.26□□□□□ -2.21
TARDBP-220ENST00000618606 S4R3C0 116 aa1.26□□□□□ -2.21
TARDBP-220ENST00000618606 DOCK8Q8NF50 2099 aa1.25□□□□□ -2.21
TARDBP-220ENST00000618606 NOS1P29475 1434 aa1.25□□□□□ -2.21
TARDBP-220ENST00000618606 RIMS2Q9UQ26 1411 aa1.25□□□□□ -2.21
TARDBP-220ENST00000618606 VWA8A3KMH1 1905 aa1.25□□□□□ -2.21
TARDBP-220ENST00000618606 BRD4O60885 1362 aaPredicted RBP1.25□□□□□ -2.21
TARDBP-220ENST00000618606 IGKV1OR2-108A0A075B7D4 117 aa1.25□□□□□ -2.21
TARDBP-220ENST00000618606 IGHV3-43A0A0B4J1X8 118 aa1.25□□□□□ -2.21
TARDBP-220ENST00000618606 IGKV1-12A0A0C4DH73 117 aa1.25□□□□□ -2.21
TARDBP-220ENST00000618606 A6NED7 52 aa1.25□□□□□ -2.21
TARDBP-220ENST00000618606 C17orf51A8MQB3 221 aa1.25□□□□□ -2.21
TARDBP-220ENST00000618606 A8MWP4 228 aa1.25□□□□□ -2.21
TARDBP-220ENST00000618606 EVPLLA8MZ36 301 aa1.25□□□□□ -2.21
TARDBP-220ENST00000618606 IGLL5B9A064 214 aa1.25□□□□□ -2.21
TARDBP-220ENST00000618606 C4orf51C9J302 202 aa1.25□□□□□ -2.21
TARDBP-220ENST00000618606 LRRN3E7EW58 273 aa1.25□□□□□ -2.21
TARDBP-220ENST00000618606 F5H5P2 479 aa1.25□□□□□ -2.21
TARDBP-220ENST00000618606 M0QYV0 167 aa1.25□□□□□ -2.21
TARDBP-220ENST00000618606 MFNGO00587 321 aa1.25□□□□□ -2.21
TARDBP-220ENST00000618606 STX10O60499 249 aa1.25□□□□□ -2.21
TARDBP-220ENST00000618606 POP7O75817 140 aaKnown RBP1.25□□□□□ -2.21
TARDBP-220ENST00000618606 AHSA1O95433 338 aa1.25□□□□□ -2.21
TARDBP-220ENST00000618606 IGKV1D-33P01593 117 aa1.25□□□□□ -2.21
TARDBP-220ENST00000618606 IGKV1-33P01594 117 aa1.25□□□□□ -2.21
TARDBP-220ENST00000618606 IGKV1D-12P01611 117 aa1.25□□□□□ -2.21
TARDBP-220ENST00000618606 ATP5G1P05496 136 aa1.25□□□□□ -2.21
TARDBP-220ENST00000618606 IGKV4-1P06312 121 aa1.25□□□□□ -2.21
TARDBP-220ENST00000618606 FBP1P09467 338 aa1.25□□□□□ -2.21
TARDBP-220ENST00000618606 ZNF14P17017 642 aaPredicted RBP1.25□□□□□ -2.21
TARDBP-220ENST00000618606 GADD45AP24522 165 aa1.25□□□□□ -2.21
TARDBP-220ENST00000618606 CNTFRP26992 372 aa1.25□□□□□ -2.21
TARDBP-220ENST00000618606 RPL12P30050 165 aaKnown RBP1.25□□□□□ -2.21
TARDBP-220ENST00000618606 AGTR1P30556 359 aa1.25□□□□□ -2.21
TARDBP-220ENST00000618606 HAAOP46952 286 aa1.25□□□□□ -2.21
TARDBP-220ENST00000618606 REG1BP48304 166 aa1.25□□□□□ -2.21
TARDBP-220ENST00000618606 HSPA13P48723 471 aa1.25□□□□□ -2.21
TARDBP-220ENST00000618606 GDI2P50395 445 aaKnown RBP1.25□□□□□ -2.21
TARDBP-220ENST00000618606 NKX2-5P52952 324 aaPredicted RBP1.25□□□□□ -2.21
TARDBP-220ENST00000618606 ACTBP60709 375 aa1.25□□□□□ -2.21
TARDBP-220ENST00000618606 RBX1P62877 108 aa1.25□□□□□ -2.21
TARDBP-220ENST00000618606 ACTG1P63261 375 aa1.25□□□□□ -2.21
TARDBP-220ENST00000618606 FMODQ06828 376 aa1.25□□□□□ -2.21
TARDBP-220ENST00000618606 MGAT3Q09327 533 aa1.25□□□□□ -2.21
TARDBP-220ENST00000618606 FUT5Q11128 374 aa1.25□□□□□ -2.21
TARDBP-220ENST00000618606 PAFAH1B3Q15102 231 aaKnown RBP1.25□□□□□ -2.21
TARDBP-220ENST00000618606 CLEC12BQ2HXU8 276 aa1.25□□□□□ -2.21
TARDBP-220ENST00000618606 TRMT12Q53H54 448 aaKnown RBP1.25□□□□□ -2.21
TARDBP-220ENST00000618606 Q6ZRU5 148 aa1.25□□□□□ -2.21
TARDBP-220ENST00000618606 AMN1Q8IY45 258 aa1.25□□□□□ -2.21
TARDBP-220ENST00000618606 HS3ST5Q8IZT8 346 aa1.25□□□□□ -2.21
TARDBP-220ENST00000618606 Q8N402 240 aa1.25□□□□□ -2.21
TARDBP-220ENST00000618606 OR10D3Q8NH80 312 aa1.25□□□□□ -2.21
TARDBP-220ENST00000618606 CYGBQ8WWM9 190 aa1.25□□□□□ -2.21
TARDBP-220ENST00000618606 ASB13Q8WXK3 278 aa1.25□□□□□ -2.21
TARDBP-220ENST00000618606 TAMM41Q96BW9 452 aa1.25□□□□□ -2.21
TARDBP-220ENST00000618606 PPP1R14BQ96C90 147 aa1.25□□□□□ -2.21
TARDBP-220ENST00000618606 TIPINQ9BVW5 301 aa1.25□□□□□ -2.21
TARDBP-220ENST00000618606 ZNF717Q9BY31 904 aaPredicted RBP1.25□□□□□ -2.21
TARDBP-220ENST00000618606 BCL2L14Q9BZR8 327 aa1.25□□□□□ -2.21
TARDBP-220ENST00000618606 GABARAPL1Q9H0R8 117 aa1.25□□□□□ -2.21
TARDBP-220ENST00000618606 ALX4Q9H161 411 aaPredicted RBP1.25□□□□□ -2.21
TARDBP-220ENST00000618606 TXNIPQ9H3M7 391 aa1.25□□□□□ -2.21
TARDBP-220ENST00000618606 BABAM2Q9NXR7 383 aa1.25□□□□□ -2.21
TARDBP-220ENST00000618606 DHCR7Q9UBM7 475 aaKnown RBP1.25□□□□□ -2.21
TARDBP-220ENST00000618606 GLS2Q9UI32 602 aa1.25□□□□□ -2.21
TARDBP-220ENST00000618606 SNX10Q9Y5X0 201 aa1.25□□□□□ -2.21
TARDBP-220ENST00000618606 SLC22A7Q9Y694 548 aa1.25□□□□□ -2.21
TARDBP-220ENST00000618606 DNMT1P26358 1616 aaKnown RBP1.25□□□□□ -2.21
TARDBP-220ENST00000618606 PLXNB3Q9ULL4 1909 aa1.25□□□□□ -2.21
TARDBP-220ENST00000618606 PLA2R1Q13018 1463 aa1.24□□□□□ -2.21
TARDBP-220ENST00000618606 CABIN1Q9Y6J0 2220 aa1.24□□□□□ -2.21
TARDBP-220ENST00000618606 IGHV3OR16-8A0A075B7F1 116 aa1.24□□□□□ -2.21
TARDBP-220ENST00000618606 IGHV3-21A0A0B4J1V1 117 aa1.24□□□□□ -2.21
TARDBP-220ENST00000618606 OR5H14A6NHG9 310 aa1.24□□□□□ -2.21
TARDBP-220ENST00000618606 ARGFXA6NJG6 315 aa1.24□□□□□ -2.21
TARDBP-220ENST00000618606 ZNF98A6NK75 572 aa1.24□□□□□ -2.21
TARDBP-220ENST00000618606 B4DEV8 164 aa1.24□□□□□ -2.21
TARDBP-220ENST00000618606 RPL36A-HNRNPH2H7BZ11 118 aa1.24□□□□□ -2.21
TARDBP-220ENST00000618606 BET1O15155 118 aa1.24□□□□□ -2.21
TARDBP-220ENST00000618606 SSNA1O43805 119 aa1.24□□□□□ -2.21
TARDBP-220ENST00000618606 RBBP9O75884 186 aa1.24□□□□□ -2.21
TARDBP-220ENST00000618606 LTAP01374 205 aa1.24□□□□□ -2.21
TARDBP-220ENST00000618606 HLA-DRAP01903 254 aa1.24□□□□□ -2.21
TARDBP-220ENST00000618606 RPS17P08708 135 aaKnown RBP1.24□□□□□ -2.21
TARDBP-220ENST00000618606 C8orf88P0DMB2 117 aa1.24□□□□□ -2.21
TARDBP-220ENST00000618606 OR13C7P0DN81 318 aa1.24□□□□□ -2.21
TARDBP-220ENST00000618606 CTSEP14091 401 aa1.24□□□□□ -2.21
TARDBP-220ENST00000618606 NQO1P15559 274 aaKnown RBP1.24□□□□□ -2.21
TARDBP-220ENST00000618606 ZNF708P17019 499 aa1.24□□□□□ -2.21
TARDBP-220ENST00000618606 ORM2P19652 201 aa1.24□□□□□ -2.21
TARDBP-220ENST00000618606 PSMA1P25786 263 aaKnown RBP1.24□□□□□ -2.21
TARDBP-220ENST00000618606 CDKN2CP42773 168 aa1.24□□□□□ -2.21
Retrieved 100 of 20,778 RNA–protein pairs in 41.2 ms