RNA–Protein interactions for RNA: ENST00000618327.4

CIITA-213, Transcript of class II major histocompatibility complex transactivator, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene CIITA, Length 4,657 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CIITA-213ENST00000618327 RAB7AP51149 207 aa11.98□□□□□ -0.49
CIITA-213ENST00000618327 PSENENQ9NZ42 101 aa11.98□□□□□ -0.49
CIITA-213ENST00000618327 KCNMB2Q9Y691 235 aa11.98□□□□□ -0.49
CIITA-213ENST00000618327 SNRNP200O75643 2136 aaKnown RBP11.98□□□□□ -0.49
CIITA-213ENST00000618327 FREM3P0C091 2139 aa11.98□□□□□ -0.49
CIITA-213ENST00000618327 J3QRE1 110 aa11.98□□□□□ -0.49
CIITA-213ENST00000618327 SLC31A2O15432 143 aa11.98□□□□□ -0.49
CIITA-213ENST00000618327 HPXP02790 462 aa11.98□□□□□ -0.49
CIITA-213ENST00000618327 DEFA4P12838 97 aa11.98□□□□□ -0.49
CIITA-213ENST00000618327 PMELP40967 661 aa11.98□□□□□ -0.49
CIITA-213ENST00000618327 SUB1P53999 127 aaKnown RBP eCLIP11.98□□□□□ -0.49
CIITA-213ENST00000618327 TAS2R45P59539 299 aa11.98□□□□□ -0.49
CIITA-213ENST00000618327 RPS11P62280 158 aaKnown RBP eCLIP11.98□□□□□ -0.49
CIITA-213ENST00000618327 IL13RA2Q14627 380 aa11.98□□□□□ -0.49
CIITA-213ENST00000618327 IQCJQ1A5X6 159 aa11.98□□□□□ -0.49
CIITA-213ENST00000618327 OR4D10Q8NGI6 311 aa11.98□□□□□ -0.49
CIITA-213ENST00000618327 KLF14Q8TD94 323 aaPredicted RBP11.98□□□□□ -0.49
CIITA-213ENST00000618327 TMEM37Q8WXS4 190 aa11.98□□□□□ -0.49
CIITA-213ENST00000618327 CORO2AQ92828 525 aa11.98□□□□□ -0.49
CIITA-213ENST00000618327 PARD6AQ9NPB6 346 aa11.98□□□□□ -0.49
CIITA-213ENST00000618327 TRAV39A0A0B4J263 110 aa11.98□□□□□ -0.49
CIITA-213ENST00000618327 RRASP10301 218 aa11.98□□□□□ -0.49
CIITA-213ENST00000618327 GZMHP20718 246 aa11.98□□□□□ -0.49
CIITA-213ENST00000618327 OR8G5Q8NG78 346 aa11.98□□□□□ -0.49
CIITA-213ENST00000618327 SLC35E1Q96K37 410 aa11.98□□□□□ -0.49
CIITA-213ENST00000618327 RASL12Q9NYN1 266 aa11.98□□□□□ -0.49
CIITA-213ENST00000618327 RCL1Q9Y2P8 373 aaKnown RBP11.98□□□□□ -0.49
CIITA-213ENST00000618327 ZNF716A6NP11 495 aa11.98□□□□□ -0.49
CIITA-213ENST00000618327 OR7C2O60412 319 aa11.98□□□□□ -0.49
CIITA-213ENST00000618327 SLC25A4P12235 298 aa11.98□□□□□ -0.49
CIITA-213ENST00000618327 CCL8P80075 99 aa11.98□□□□□ -0.49
CIITA-213ENST00000618327 GGNBP1Q5YKI7 109 aa11.98□□□□□ -0.49
CIITA-213ENST00000618327 CLEC18BQ6UXF7 455 aa11.98□□□□□ -0.49
CIITA-213ENST00000618327 SLC25A42Q86VD7 318 aa11.98□□□□□ -0.49
CIITA-213ENST00000618327 OR4C5Q8NGB2 326 aa11.98□□□□□ -0.49
CIITA-213ENST00000618327 VAMP8Q9BV40 100 aa11.98□□□□□ -0.49
CIITA-213ENST00000618327 OBSL1O75147 1896 aa11.97□□□□□ -0.49
CIITA-213ENST00000618327 HNF1AP20823 631 aa11.97□□□□□ -0.49
CIITA-213ENST00000618327 PAX6P26367 422 aa11.97□□□□□ -0.49
CIITA-213ENST00000618327 ID4P47928 161 aa11.97□□□□□ -0.49
CIITA-213ENST00000618327 MEOX2P50222 304 aa11.97□□□□□ -0.49
CIITA-213ENST00000618327 FAM24BQ8N5W8 94 aa11.97□□□□□ -0.49
CIITA-213ENST00000618327 ERGIC1Q969X5 290 aa11.97□□□□□ -0.49
CIITA-213ENST00000618327 KIAA1456Q9P272 454 aa11.97□□□□□ -0.49
CIITA-213ENST00000618327 WSB1Q9Y6I7 421 aa11.97□□□□□ -0.49
CIITA-213ENST00000618327 J3QW42 95 aa11.97□□□□□ -0.49
CIITA-213ENST00000618327 FCGR3BO75015 233 aa11.97□□□□□ -0.49
CIITA-213ENST00000618327 CST4P01036 141 aa11.97□□□□□ -0.49
CIITA-213ENST00000618327 IGHV3-13P01766 116 aa11.97□□□□□ -0.49
CIITA-213ENST00000618327 IGHV3-7P01780 117 aa11.97□□□□□ -0.49
CIITA-213ENST00000618327 LPAR6P43657 344 aa11.97□□□□□ -0.49
CIITA-213ENST00000618327 HLA-DRB3P79483 266 aa11.97□□□□□ -0.49
CIITA-213ENST00000618327 MIDNQ504T8 468 aa11.97□□□□□ -0.49
CIITA-213ENST00000618327 IGSF11Q5DX21 431 aa11.97□□□□□ -0.49
CIITA-213ENST00000618327 ADAMTS17Q8TE56 1095 aa11.97□□□□□ -0.49
CIITA-213ENST00000618327 ZNF665Q9H7R5 613 aa11.97□□□□□ -0.49
CIITA-213ENST00000618327 CACFD1Q9UGQ2 172 aa11.97□□□□□ -0.49
CIITA-213ENST00000618327 H3BP45 60 aa11.97□□□□□ -0.49
CIITA-213ENST00000618327 SYNGR1O43759 233 aa11.97□□□□□ -0.49
CIITA-213ENST00000618327 CST7O76096 145 aa11.97□□□□□ -0.49
CIITA-213ENST00000618327 FCGR3AP08637 254 aa11.97□□□□□ -0.49
CIITA-213ENST00000618327 ACSF3Q4G176 576 aaPredicted RBP11.97□□□□□ -0.49
CIITA-213ENST00000618327 TOMM20LQ6UXN7 152 aa11.97□□□□□ -0.49
CIITA-213ENST00000618327 SLC24A4Q8NFF2 622 aa11.97□□□□□ -0.49
CIITA-213ENST00000618327 ST6GAL2Q96JF0 529 aa11.97□□□□□ -0.49
CIITA-213ENST00000618327 ONECUT1Q9UBC0 465 aa11.97□□□□□ -0.49
CIITA-213ENST00000618327 PCNX2A6NKB5 2137 aa11.97□□□□□ -0.49
CIITA-213ENST00000618327 CLDN34H7C241 214 aa11.96□□□□□ -0.49
CIITA-213ENST00000618327 GPR37O15354 613 aa11.96□□□□□ -0.49
CIITA-213ENST00000618327 ADAP1O75689 374 aa11.96□□□□□ -0.49
CIITA-213ENST00000618327 CLEC3BP05452 202 aa11.96□□□□□ -0.49
CIITA-213ENST00000618327 TPPP2P59282 170 aa11.96□□□□□ -0.49
CIITA-213ENST00000618327 GNB1P62873 340 aa11.96□□□□□ -0.49
CIITA-213ENST00000618327 GNB2P62879 340 aa11.96□□□□□ -0.49
CIITA-213ENST00000618327 ZNF429Q86V71 674 aa11.96□□□□□ -0.49
CIITA-213ENST00000618327 OR2V2Q96R30 315 aa11.96□□□□□ -0.49
CIITA-213ENST00000618327 MMP26Q9NRE1 261 aa11.96□□□□□ -0.49
CIITA-213ENST00000618327 NPTNQ9Y639 398 aa11.96□□□□□ -0.49
CIITA-213ENST00000618327 CXCL3P19876 107 aa11.96□□□□□ -0.49
CIITA-213ENST00000618327 TECTAO75443 2155 aa11.96□□□□□ -0.49
CIITA-213ENST00000618327 IGHV3OR15-7A0A075B7D8 119 aa11.96□□□□□ -0.49
CIITA-213ENST00000618327 CLEC18AA5D8T8 446 aa11.96□□□□□ -0.49
CIITA-213ENST00000618327 PRR32B1ATL7 298 aa11.96□□□□□ -0.49
CIITA-213ENST00000618327 ST8SIA5O15466 376 aa11.96□□□□□ -0.49
CIITA-213ENST00000618327 RPL29P47914 159 aaKnown RBP11.96□□□□□ -0.49
CIITA-213ENST00000618327 PTTG1IPP53801 180 aa11.96□□□□□ -0.49
CIITA-213ENST00000618327 AESQ08117 197 aa11.96□□□□□ -0.49
CIITA-213ENST00000618327 CLEC18CQ8NCF0 446 aa11.96□□□□□ -0.49
CIITA-213ENST00000618327 OR4A4PQ8NGN8 299 aa11.96□□□□□ -0.49
CIITA-213ENST00000618327 PKIBQ9C010 78 aa11.96□□□□□ -0.49
CIITA-213ENST00000618327 YTHDF2Q9Y5A9 579 aaKnown RBP11.96□□□□□ -0.49
CIITA-213ENST00000618327 RAB32Q13637 225 aa11.96□□□□□ -0.5
CIITA-213ENST00000618327 ZNF826PQ6ZT77 177 aa11.96□□□□□ -0.5
CIITA-213ENST00000618327 TBC1D26Q86UD7 250 aa11.96□□□□□ -0.5
CIITA-213ENST00000618327 SPACA3Q8IXA5 215 aa11.96□□□□□ -0.5
CIITA-213ENST00000618327 GPR137Q96N19 417 aa11.96□□□□□ -0.5
CIITA-213ENST00000618327 NMES1Q9C002 83 aa11.96□□□□□ -0.5
CIITA-213ENST00000618327 WIPI2Q9Y4P8 454 aa11.96□□□□□ -0.5
CIITA-213ENST00000618327 PLXNB3Q9ULL4 1909 aa11.95□□□□□ -0.5
CIITA-213ENST00000618327 A0A0G2JK05 382 aa11.95□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 41.2 ms